19-35827201-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827201
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827201
    reference: chr 19
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.427T>C
  hgvsp: ENSP00000470724.1:p.Trp143Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4583T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.675T>C
  hgvsp: ENST00000536635.2:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.675T>C
  hgvsp: ENST00000341773.6:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.556T>C
  hgvsp: ENSP00000470193.1:p.Trp186Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.466T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.675T>C
  hgvsp: ENST00000544992.2:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1457T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.159T>C
  hgvsp: ENST00000419549.2:c.159T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3374T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471972
  ensembl transcript: ENST00000593867
  gene symbol: CD22
  hgvsc: ENST00000593867.1:c.675T>C
  hgvsp: ENST00000593867.1:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.307T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3374T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.675T>C
  hgvsp: ENST00000594250.1:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.675T>C
  hgvsp: ENST00000085219.5:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3374T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4583T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.315T>C
  hgvsp: ENST00000270311.6:c.315T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31530
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Trp143Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-35827204-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827204
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827204
    reference: chr 19
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1454G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.469G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4580G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.162G>A
  hgvsp: ENST00000419549.2:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3377G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.678G>A
  hgvsp: ENST00000341773.6:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3377G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.678G>A
  hgvsp: ENST00000085219.5:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.559G>A
  hgvsp: ENSP00000470193.1:p.Glu187Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.310G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.678G>A
  hgvsp: ENST00000594250.1:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.430G>A
  hgvsp: ENSP00000470724.1:p.Glu144Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.678G>A
  hgvsp: ENST00000544992.2:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.678G>A
  hgvsp: ENST00000536635.2:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4580G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3377G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.318G>A
  hgvsp: ENST00000270311.6:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu144Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-35827214-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827214
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827214
    reference: chr 19
allele count: 1
allele frequency: 8.297928836962294e-6
allele num: 120512
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4570T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3387T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3387T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.569T>C
  hgvsp: ENSP00000470193.1:p.Leu190Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.688T>C
  hgvsp: ENSP00000339349.6:p.Ser230Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.440T>C
  hgvsp: ENSP00000470724.1:p.Leu147Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.688T>C
  hgvsp: ENSP00000442279.1:p.Ser230Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4570T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.328T>C
  hgvsp: ENSP00000270311.6:p.Ser110Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.688T>C
  hgvsp: ENSP00000085219.4:p.Ser230Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1444T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.688T>C
  hgvsp: ENSP00000441237.1:p.Ser230Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.172T>C
  hgvsp: ENSP00000403822.2:p.Ser58Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3387T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.479T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.688T>C
  hgvsp: ENSP00000469984.1:p.Ser230Pro
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.320T>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser230Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

19-35827223-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827223
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827223
    reference: chr 19
allele count: 1
allele frequency: 8.351707088928977e-6
allele num: 119736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1435A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.337A>T
  hgvsp: ENSP00000270311.6:p.Thr113Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.697A>T
  hgvsp: ENSP00000085219.4:p.Thr233Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.697A>T
  hgvsp: ENSP00000441237.1:p.Thr233Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4561A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.697A>T
  hgvsp: ENSP00000339349.6:p.Thr233Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*2A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.697A>T
  hgvsp: ENSP00000469984.1:p.Thr233Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.697A>T
  hgvsp: ENSP00000442279.1:p.Thr233Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.329A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.181A>T
  hgvsp: ENSP00000403822.2:p.Thr61Ser
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4561A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*2A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3396A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3396A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.488A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3396A>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr233Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

19-35827225-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827225
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827225
    reference: chr 19
allele count: 2
allele frequency: 1.674256630056255e-5
allele num: 119456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4559G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3398G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3398G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.699G>A
  hgvsp: ENST00000536635.2:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.699G>A
  hgvsp: ENST00000085219.5:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.331G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.699G>A
  hgvsp: ENST00000341773.6:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.699G>A
  hgvsp: ENST00000544992.2:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.490G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.699G>A
  hgvsp: ENST00000594250.1:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4559G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1433G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.183G>A
  hgvsp: ENST00000419549.2:c.183G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.339G>A
  hgvsp: ENST00000270311.6:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3398G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr233Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

19-35827226-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827226
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827226
    reference: chr 19
allele count: 8
allele frequency: 6.701289998324677e-5
allele num: 119380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*5G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*5G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3399G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.340G>C
  hgvsp: ENSP00000270311.6:p.Val114Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.700G>C
  hgvsp: ENSP00000469984.1:p.Val234Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3399G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.700G>C
  hgvsp: ENSP00000339349.6:p.Val234Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.332G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.700G>C
  hgvsp: ENSP00000441237.1:p.Val234Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.700G>C
  hgvsp: ENSP00000442279.1:p.Val234Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.184G>C
  hgvsp: ENSP00000403822.2:p.Val62Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1432G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4558G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.491G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3399G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.700G>C
  hgvsp: ENSP00000085219.4:p.Val234Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4558G>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val234Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

19-35827237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827237
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827237
    reference: chr 19
allele count: 1
allele frequency: 8.588704136319913e-6
allele num: 116432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.351C>T
  hgvsp: ENST00000270311.6:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4547C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.195C>T
  hgvsp: ENST00000419549.2:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3410C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.711C>T
  hgvsp: ENST00000544992.2:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.711C>T
  hgvsp: ENST00000085219.5:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.711C>T
  hgvsp: ENST00000594250.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.502C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3410C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.711C>T
  hgvsp: ENST00000536635.2:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.343C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4547C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.711C>T
  hgvsp: ENST00000341773.6:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1421C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3410C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn237Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

19-35827244-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827244
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827244
    reference: chr 19
allele count: 3
allele frequency: 2.616659398168338e-5
allele num: 114650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358C>T
  hgvsp: ENSP00000270311.6:p.His120Tyr
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4540C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718C>T
  hgvsp: ENSP00000442279.1:p.His240Tyr
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3417C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718C>T
  hgvsp: ENSP00000085219.4:p.His240Tyr
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3417C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718C>T
  hgvsp: ENSP00000441237.1:p.His240Tyr
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718C>T
  hgvsp: ENSP00000339349.6:p.His240Tyr
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202C>T
  hgvsp: ENSP00000403822.2:p.His68Tyr
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1414C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4540C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3417C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718C>T
  hgvsp: ENSP00000469984.1:p.His240Tyr
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His240Tyr
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-35827256-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827256
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827256
    reference: chr 19
allele count: 3
allele frequency: 2.731494127287626e-5
allele num: 109830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1402C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3429C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4528C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3429C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3429C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+12C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4528C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+12C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19941
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-35827257-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827257
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827257
    reference: chr 19
allele count: 25
allele frequency: 2.285275512815825e-4
allele num: 109396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3430G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4527G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1401G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4527G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3430G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3430G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+13G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+13G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-35827263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827263
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827263
    reference: chr 19
allele count: 2
allele frequency: 1.865776069556132e-5
allele num: 107194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1395C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3436C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3436C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+19C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4521C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4521C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3436C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+19C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-35827267-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827267
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827267
    reference: chr 19
allele count: 1
allele frequency: 9.420808682217281e-6
allele num: 106148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1391T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3440T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3440T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3440T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4517T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4517T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+23T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+23T>G
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

19-35827281-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827281
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827281
    reference: chr 19
allele count: 1
allele frequency: 9.886502946177877e-6
allele num: 101148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3454T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3454T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1377T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4503T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3454T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+37T>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4503T>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12028
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-35827291-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827291
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827291
    reference: chr 19
allele count: 1
allele frequency: 1.069404341781628e-5
allele num: 93510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3464C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3464C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4493C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3464C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1367C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+47C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4493C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+47C>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14383
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

19-35827292-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35827292
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35827292
    reference: chr 19
allele count: 2
allele frequency: 2.15382627237287e-5
allele num: 92858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.358+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-4492T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.430+3465T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-1366T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.202+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.509+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.718+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.406+3465T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.412+3465T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.718+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.350+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*23+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*23+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.718+48T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-4492T>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14291
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21236
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11896
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

19-35828607-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828607
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828607
    reference: chr 19
allele count: 1
allele frequency: 9.832261616817101e-6
allele num: 101706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3177A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1363A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3177A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3177A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-51A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1363A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3177A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3177A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-51A>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10418
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

19-35828619-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828619
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828619
    reference: chr 19
allele count: 1736
allele frequency: 1.686681434845129e-2
allele num: 102924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3165T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3165T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1375T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3165T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3165T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1375T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-39T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3165T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-39T>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 7.5e0
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 1.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 21670
  bin: 2.25e1
  variant carriers: 400
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
num of homozygotes: 93
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/19-35828622-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828622
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828622
    reference: chr 19
allele count: 20
allele frequency: 1.938172303517783e-4
allele num: 103190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3162C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3162C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3162C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1378C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1378C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3162C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-36C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3162C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-36C>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10088
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22975
  bin: 2.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

19-35828624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828624
    reference: chr 19
allele count: 3
allele frequency: 2.898606736362055e-5
allele num: 103498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3160C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3160C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3160C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3160C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1380C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1380C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-34C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3160C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

19-35828625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828625
    reference: chr 19
allele count: 3
allele frequency: 2.88972798027279e-5
allele num: 103816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3159G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3159G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1381G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3159G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3159G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3159G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-33G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1381G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

19-35828625-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828624
    reference: chr 19
allele count: 4
allele frequency: 3.85297064036372e-5
allele num: 103816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1386delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3154delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3154delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1386delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-28delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3154delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3154delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3154delC
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: GC
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

19-35828625-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828626
    reference: chr 19
allele count: 7
allele frequency: 6.742698620636511e-5
allele num: 103816
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1386dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3154dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3154dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3154dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3154dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3154dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1386dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-28dupC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-28dupC
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

19-35828629-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828629
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828629
    reference: chr 19
allele count: 2
allele frequency: 1.904544242562755e-5
allele num: 105012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3155C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3155C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1385C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3155C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3155C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3155C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-29C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1385C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

19-35828630-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828630
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828630
    reference: chr 19
allele count: 1
allele frequency: 9.498841141380751e-6
allele num: 105276
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3154C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3154C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3154C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3154C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3154C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1386C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-28C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1386C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-28C>G
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

19-35828631-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828631
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828631
    reference: chr 19
allele count: 1
allele frequency: 9.484786402610213e-6
allele num: 105432
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3153T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3153T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3153T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1387T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3153T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3153T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1387T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-27T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-27T>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-35828632-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828632
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828632
    reference: chr 19
allele count: 19
allele frequency: 1.79869736443502e-4
allele num: 105632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3152C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1388C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3152C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1388C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3152C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3152C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-26C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3152C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-26C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-35828635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828635
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828635
    reference: chr 19
allele count: 4739
allele frequency: 4.438346413920992e-2
allele num: 106774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3149C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1391C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3149C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3149C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3149C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3149C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1391C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-23C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-23C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 1.25e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 12997
  bin: 2.75e1
  variant carriers: 695
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 513
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 326
genotype depth: GenotypeDepth
  all individuals: 25909
  bin: 2.25e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 7.5e0
  variant carriers: 192
genotype quality: GenotypeQuality
num of homozygotes: 197
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

19-35828636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828636
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828636
    reference: chr 19
allele count: 1
allele frequency: 9.313415043027977e-6
allele num: 107372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3148G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3148G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1392G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1392G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3148G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3148G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3148G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-22G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-22G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

19-35828638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828638
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828638
    reference: chr 19
allele count: 1
allele frequency: 9.252063210095851e-6
allele num: 108084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1394C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1394C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3146C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3146C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3146C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3146C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-20C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3146C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

19-35828640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828640
    reference: chr 19
allele count: 1
allele frequency: 9.203696204395685e-6
allele num: 108652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3144G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3144G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1396G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3144G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3144G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3144G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-18G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1396G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-35828640-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828639
    reference: chr 19
allele count: 70
allele frequency: 6.44258734307698e-4
allele num: 108652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3140delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1400delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3140delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1400delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3140delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-14delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3140delC
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3140delC
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14685
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: GC
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

19-35828641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828641
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828641
    reference: chr 19
allele count: 1
allele frequency: 9.205560158335634e-6
allele num: 108630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3143C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3143C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3143C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1397C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3143C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3143C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1397C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-17C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-17C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

19-35828642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828642
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828642
    reference: chr 19
allele count: 1
allele frequency: 9.178016814126803e-6
allele num: 108956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3142C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3142C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1398C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3142C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1398C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-16C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3142C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3142C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-16C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-35828648-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828648
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828648
    reference: chr 19
allele count: 1
allele frequency: 9.068814161860195e-6
allele num: 110268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.44-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*24-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3136G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3136G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.359-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1404G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3136G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.719-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*24-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.351-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3136G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.203-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.719-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3136G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.510-10G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1404G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.719-10G>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-35828669-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828669
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828669
    reference: chr 19
allele count: 1
allele frequency: 8.740036358551252e-6
allele num: 114416
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.730T>G
  hgvsp: ENSP00000441237.1:p.Leu244Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.521T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1425T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.730T>G
  hgvsp: ENSP00000085219.4:p.Leu244Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3115T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*35T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.362T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3115T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.214T>G
  hgvsp: ENSP00000403822.2:p.Leu72Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.370T>G
  hgvsp: ENSP00000270311.6:p.Leu124Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1425T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.730T>G
  hgvsp: ENSP00000442279.1:p.Leu244Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*35T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3115T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3115T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3115T>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.55T>G
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu244Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

19-35828673-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828673
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828673
    reference: chr 19
allele count: 1
allele frequency: 8.69187309865276e-6
allele num: 115050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1429A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.734A>T
  hgvsp: ENSP00000441237.1:p.Glu245Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.734A>T
  hgvsp: ENSP00000442279.1:p.Glu245Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3111A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.218A>T
  hgvsp: ENSP00000403822.2:p.Glu73Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3111A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.734A>T
  hgvsp: ENSP00000085219.4:p.Glu245Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*39A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.525A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3111A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1429A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3111A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*39A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.374A>T
  hgvsp: ENSP00000270311.6:p.Glu125Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.59A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.366A>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3111A>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu245Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

19-35828674-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828674
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828674
    reference: chr 19
allele count: 4
allele frequency: 3.47131823309902e-5
allele num: 115230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.367G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3110G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.735G>A
  hgvsp: ENST00000536635.2:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.219G>A
  hgvsp: ENST00000419549.2:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.375G>A
  hgvsp: ENST00000270311.6:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3110G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.526G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1430G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.735G>A
  hgvsp: ENST00000085219.5:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.735G>A
  hgvsp: ENST00000544992.2:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3110G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3110G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*40G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1430G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3110G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.60G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*40G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu245Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/19-35828685-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828685
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828685
    reference: chr 19
allele count: 1
allele frequency: 8.536064874093044e-6
allele num: 117150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.746C>A
  hgvsp: ENSP00000442279.1:p.Thr249Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.386C>A
  hgvsp: ENSP00000270311.6:p.Thr129Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3099C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3099C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*51C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3099C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.230C>A
  hgvsp: ENSP00000403822.2:p.Thr77Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1441C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3099C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1441C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*51C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.746C>A
  hgvsp: ENSP00000085219.4:p.Thr249Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.71C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.746C>A
  hgvsp: ENSP00000441237.1:p.Thr249Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3099C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.537C>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.378C>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr249Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

19-35828700-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828700
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828701
    reference: chr 19
allele count: 1
allele frequency: 8.37436773523599e-6
allele num: 119412
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.402dupA
  hgvsp: ENSP00000270311.6:p.Val135SerfsTer60
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*67dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3083dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.762dupA
  hgvsp: ENSP00000441237.1:p.Val255SerfsTer60
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1457dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1457dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3083dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.246dupA
  hgvsp: ENSP00000403822.2:p.Val83SerfsTer60
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*67dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.87dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.394dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3083dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.762dupA
  hgvsp: ENSP00000085219.4:p.Val255SerfsTer60
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.762dupA
  hgvsp: ENSP00000442279.1:p.Val255SerfsTer60
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3083dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3083dupA
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.553dupA
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val255SerfsTer60
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-35828708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828708
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828708
    reference: chr 19
allele count: 2
allele frequency: 1.665722757104307e-5
allele num: 120068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3076G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.560G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.409G>A
  hgvsp: ENSP00000270311.6:p.Glu137Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.769G>A
  hgvsp: ENSP00000442279.1:p.Glu257Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.769G>A
  hgvsp: ENSP00000085219.4:p.Glu257Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1464G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3076G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.253G>A
  hgvsp: ENSP00000403822.2:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*74G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.401G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3076G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1464G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*74G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.769G>A
  hgvsp: ENSP00000441237.1:p.Glu257Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.94G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3076G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3076G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu257Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

19-35828710-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828710
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828710
    reference: chr 19
allele count: 1
allele frequency: 8.317391665973551e-6
allele num: 120230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3074G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*76G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.771G>A
  hgvsp: ENST00000085219.5:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.255G>A
  hgvsp: ENST00000419549.2:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.403G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3074G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.771G>A
  hgvsp: ENST00000536635.2:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3074G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601732
  gene symbol: CD22
  hgvsc: ENST00000601732.1:n.562G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1466G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3074G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.96G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*76G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.411G>A
  hgvsp: ENST00000270311.6:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.771G>A
  hgvsp: ENST00000544992.2:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1466G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3074G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu257Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

19-35828713-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828713
    reference: chr 19
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3071G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.406G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1469G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.774G>A
  hgvsp: ENST00000085219.5:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*79G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3071G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.774G>A
  hgvsp: ENST00000544992.2:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3071G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.414G>A
  hgvsp: ENST00000270311.6:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.258G>A
  hgvsp: ENST00000419549.2:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3071G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.774G>A
  hgvsp: ENST00000536635.2:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3071G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.99G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1469G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*79G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly258Gly
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

19-35828713-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828713
    reference: chr 19
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.774G>T
  hgvsp: ENST00000544992.2:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3071G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.774G>T
  hgvsp: ENST00000536635.2:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3071G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3071G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.414G>T
  hgvsp: ENST00000270311.6:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*79G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1469G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3071G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.406G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3071G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.258G>T
  hgvsp: ENST00000419549.2:c.258G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1469G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*79G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.774G>T
  hgvsp: ENST00000085219.5:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.99G>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly258Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-35828714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828714
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828714
    reference: chr 19
allele count: 1
allele frequency: 8.303165166561494e-6
allele num: 120436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*80G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.775G>A
  hgvsp: ENSP00000085219.4:p.Asp259Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.415G>A
  hgvsp: ENSP00000270311.6:p.Asp139Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*80G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3070G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.775G>A
  hgvsp: ENSP00000441237.1:p.Asp259Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.259G>A
  hgvsp: ENSP00000403822.2:p.Asp87Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.775G>A
  hgvsp: ENSP00000442279.1:p.Asp259Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.100G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3070G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3070G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3070G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1470G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.407G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1470G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3070G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp259Asn
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

19-35828726-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828726
    reference: chr 19
allele count: 1
allele frequency: 8.278282753025713e-6
allele num: 120798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.787A>G
  hgvsp: ENSP00000442279.1:p.Met263Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.787A>G
  hgvsp: ENSP00000441237.1:p.Met263Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3058A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.419A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3058A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.271A>G
  hgvsp: ENSP00000403822.2:p.Met91Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.112A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*92A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.427A>G
  hgvsp: ENSP00000270311.6:p.Met143Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3058A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.787A>G
  hgvsp: ENSP00000085219.4:p.Met263Val
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1482A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1482A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3058A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3058A>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*92A>G
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Met263Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP

19-35828731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828731
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828731
    reference: chr 19
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.117C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.424C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3053C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.792C>T
  hgvsp: ENST00000544992.2:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.792C>T
  hgvsp: ENST00000085219.5:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.792C>T
  hgvsp: ENST00000536635.2:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3053C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*97C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*97C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.276C>T
  hgvsp: ENST00000419549.2:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1487C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1487C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3053C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.432C>T
  hgvsp: ENST00000270311.6:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3053C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3053C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr264Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-35828734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828734
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828734
    reference: chr 19
allele count: 876
allele frequency: 7.246017172068093e-3
allele num: 120894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*100C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.795C>T
  hgvsp: ENST00000544992.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3050C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.435C>T
  hgvsp: ENST00000270311.6:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.279C>T
  hgvsp: ENST00000419549.2:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3050C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3050C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3050C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3050C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.427C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1490C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.795C>T
  hgvsp: ENST00000536635.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*100C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.120C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.795C>T
  hgvsp: ENST00000085219.5:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1490C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 3.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 61
genotype quality: GenotypeQuality
hgvs: p.Cys265Cys
num of homozygotes: 5
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

19-35828735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828735
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828735
    reference: chr 19
allele count: 5
allele frequency: 4.134418204670239e-5
allele num: 120936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.796G>A
  hgvsp: ENSP00000442279.1:p.Glu266Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.796G>A
  hgvsp: ENSP00000441237.1:p.Glu266Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3049G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1491G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*101G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1491G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.121G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3049G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3049G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.436G>A
  hgvsp: ENSP00000270311.6:p.Glu146Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.280G>A
  hgvsp: ENSP00000403822.2:p.Glu94Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*101G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.796G>A
  hgvsp: ENSP00000085219.4:p.Glu266Lys
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3049G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3049G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.428G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu266Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-35828738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828738
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828738
    reference: chr 19
allele count: 1
allele frequency: 8.265282507356101e-6
allele num: 120988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.124G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3046G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.799G>A
  hgvsp: ENSP00000441237.1:p.Val267Ile
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*104G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.439G>A
  hgvsp: ENSP00000270311.6:p.Val147Ile
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.283G>A
  hgvsp: ENSP00000403822.2:p.Val95Ile
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.799G>A
  hgvsp: ENSP00000085219.4:p.Val267Ile
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1494G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.431G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*104G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3046G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3046G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.799G>A
  hgvsp: ENSP00000442279.1:p.Val267Ile
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1494G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3046G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3046G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val267Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

19-35828754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828754
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828754
    reference: chr 19
allele count: 2
allele frequency: 1.651391297167864e-5
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.447C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1510C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.299C>T
  hgvsp: ENSP00000403822.2:p.Pro100Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.815C>T
  hgvsp: ENSP00000441237.1:p.Pro272Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3030C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.455C>T
  hgvsp: ENSP00000270311.6:p.Pro152Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*120C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3030C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1510C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3030C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3030C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*120C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.815C>T
  hgvsp: ENSP00000085219.4:p.Pro272Leu
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.140C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3030C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.815C>T
  hgvsp: ENSP00000442279.1:p.Pro272Leu
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro272Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-35828758-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828758
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828758
    reference: chr 19
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3026G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.819G>A
  hgvsp: ENST00000544992.2:c.819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1514G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*124G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3026G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.144G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.303G>A
  hgvsp: ENST00000419549.2:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.459G>A
  hgvsp: ENST00000270311.6:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.819G>A
  hgvsp: ENST00000536635.2:c.819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.819G>A
  hgvsp: ENST00000085219.5:c.819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3026G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3026G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.451G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1514G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*124G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3026G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu273Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

19-35828759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828759
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828759
    reference: chr 19
allele count: 2
allele frequency: 1.650955077512341e-5
allele num: 121142
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*125T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3025T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3025T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.145T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.820T>C
  hgvsp: ENSP00000442279.1:p.Tyr274His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3025T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.460T>C
  hgvsp: ENSP00000270311.6:p.Tyr154His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.452T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.304T>C
  hgvsp: ENSP00000403822.2:p.Tyr102His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.820T>C
  hgvsp: ENSP00000441237.1:p.Tyr274His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3025T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3025T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1515T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.820T>C
  hgvsp: ENSP00000085219.4:p.Tyr274His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1515T>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*125T>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Tyr274His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

19-35828763-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828763
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828763
    reference: chr 19
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.824C>G
  hgvsp: ENSP00000085219.4:p.Thr275Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3021C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*129C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.824C>G
  hgvsp: ENSP00000441237.1:p.Thr275Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3021C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.456C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.464C>G
  hgvsp: ENSP00000270311.6:p.Thr155Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1519C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.824C>G
  hgvsp: ENSP00000442279.1:p.Thr275Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.308C>G
  hgvsp: ENSP00000403822.2:p.Thr103Arg
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*129C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3021C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.149C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1519C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3021C>G
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3021C>G
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr275Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-35828764-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828764
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828764
    reference: chr 19
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3020G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.309G>C
  hgvsp: ENST00000419549.2:c.309G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.825G>C
  hgvsp: ENST00000544992.2:c.825G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*130G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.465G>C
  hgvsp: ENST00000270311.6:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3020G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.825G>C
  hgvsp: ENST00000536635.2:c.825G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.150G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.457G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1520G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.825G>C
  hgvsp: ENST00000085219.5:c.825G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*130G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3020G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3020G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3020G>C
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1520G>C
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr275Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

19-35828767-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828767
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828767
    reference: chr 19
allele count: 3
allele frequency: 2.475329218786098e-5
allele num: 121196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*133G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.828G>A
  hgvsp: ENST00000085219.5:c.828G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*133G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.828G>A
  hgvsp: ENST00000544992.2:c.828G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.468G>A
  hgvsp: ENST00000270311.6:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3017G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1523G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1523G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3017G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.312G>A
  hgvsp: ENST00000419549.2:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.460G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.828G>A
  hgvsp: ENST00000536635.2:c.828G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3017G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3017G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.153G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3017G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr276Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ

19-35828773-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828773
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828773
    reference: chr 19
allele count: 1659
allele frequency: 1.368947420536687e-2
allele num: 121188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.474C>T
  hgvsp: ENST00000270311.6:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.834C>T
  hgvsp: ENST00000536635.2:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.834C>T
  hgvsp: ENST00000544992.2:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3011C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3011C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*139C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.834C>T
  hgvsp: ENST00000085219.5:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.318C>T
  hgvsp: ENST00000419549.2:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3011C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1529C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3011C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.159C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*139C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3011C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.466C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1529C>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 17801
  bin: 2.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
hgvs: p.Ser278Ser
num of homozygotes: 67
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

19-35828782-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828782
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828782
    reference: chr 19
allele count: 4
allele frequency: 3.299676631690094e-5
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.843G>T
  hgvsp: ENSP00000442279.1:p.Lys281Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-3002G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.483G>T
  hgvsp: ENSP00000270311.6:p.Lys161Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-3002G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.475G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-3002G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-3002G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-3002G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.327G>T
  hgvsp: ENSP00000403822.2:p.Lys109Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.843G>T
  hgvsp: ENSP00000441237.1:p.Lys281Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*148G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.843G>T
  hgvsp: ENSP00000085219.4:p.Lys281Asn
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*148G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1538G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1538G>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.168G>T
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys281Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-35828794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828794
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828794
    reference: chr 19
allele count: 6
allele frequency: 4.949269982677555e-5
allele num: 121230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-2990G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.855G>A
  hgvsp: ENST00000085219.5:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-2990G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-2990G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.180G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1550G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.487G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.855G>A
  hgvsp: ENST00000536635.2:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-2990G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.339G>A
  hgvsp: ENST00000419549.2:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-2990G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*160G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1550G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.495G>A
  hgvsp: ENST00000270311.6:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*160G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.855G>A
  hgvsp: ENST00000544992.2:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18627
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser285Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

19-35828803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828803
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828803
    reference: chr 19
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1559G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-2981G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*169G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.189G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.864G>A
  hgvsp: ENST00000085219.5:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.864G>A
  hgvsp: ENST00000544992.2:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.504G>A
  hgvsp: ENST00000270311.6:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-2981G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-2981G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*169G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.348G>A
  hgvsp: ENST00000419549.2:c.348G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-2981G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1559G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.496G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.864G>A
  hgvsp: ENST00000536635.2:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-2981G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys288Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

19-35828817-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828817
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828817
    reference: chr 19
allele count: 3
allele frequency: 2.474716644944154e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1573C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.518C>T
  hgvsp: ENSP00000270311.6:p.Thr173Met
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1573C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-2967C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-2967C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-2967C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.878C>T
  hgvsp: ENSP00000441237.1:p.Thr293Met
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.510C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*183C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.362C>T
  hgvsp: ENSP00000403822.2:p.Thr121Met
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.203C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-2967C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.878C>T
  hgvsp: ENSP00000085219.4:p.Thr293Met
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-2967C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*183C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.878C>T
  hgvsp: ENSP00000442279.1:p.Thr293Met
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr293Met
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

19-35828818-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828818
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828818
    reference: chr 19
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-2966G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.879G>A
  hgvsp: ENST00000544992.2:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.363G>A
  hgvsp: ENST00000419549.2:c.363G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-2966G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.879G>A
  hgvsp: ENST00000085219.5:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.519G>A
  hgvsp: ENST00000270311.6:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1574G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.879G>A
  hgvsp: ENST00000536635.2:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*184G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-2966G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*184G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.204G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-2966G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.511G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1574G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-2966G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr293Thr
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

19-35828824-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828824
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828824
    reference: chr 19
allele count: 13
allele frequency: 1.072412598373233e-4
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.525C>T
  hgvsp: ENST00000270311.6:c.525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.369C>T
  hgvsp: ENST00000419549.2:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-2960C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1580C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-2960C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.885C>T
  hgvsp: ENST00000536635.2:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-2960C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1580C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-2960C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*190C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.517C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.885C>T
  hgvsp: ENST00000085219.5:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-2960C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*190C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.210C>T
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.885C>T
  hgvsp: ENST00000544992.2:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn295Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-35828829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35828829
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35828829
    reference: chr 19
allele count: 3
allele frequency: 2.474839135456195e-5
allele num: 121220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000441237
  ensembl transcript: ENST00000544992
  gene symbol: CD22
  hgvsc: ENST00000544992.2:c.890G>A
  hgvsp: ENSP00000441237.1:p.Arg297His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000601329
  gene symbol: CD22
  hgvsc: ENST00000601329.1:n.215G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000270311
  ensembl transcript: ENST00000270311
  gene symbol: CD22
  hgvsc: ENST00000270311.6:c.530G>A
  hgvsp: ENSP00000270311.6:p.Arg177His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000442279
  ensembl transcript: ENST00000536635
  gene symbol: CD22
  hgvsc: ENST00000536635.2:c.890G>A
  hgvsp: ENSP00000442279.1:p.Arg297His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470193
  ensembl transcript: ENST00000601769
  gene symbol: CD22
  hgvsc: ENST00000601769.1:c.*195G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000403822
  ensembl transcript: ENST00000419549
  gene symbol: CD22
  hgvsc: ENST00000419549.2:c.374G>A
  hgvsp: ENSP00000403822.2:p.Arg125His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598815
  gene symbol: CD22
  hgvsc: ENST00000598815.1:n.45-2955G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000470724
  ensembl transcript: ENST00000594349
  gene symbol: CD22
  hgvsc: ENST00000594349.1:c.*195G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469984
  ensembl transcript: ENST00000594250
  gene symbol: CD22
  hgvsc: ENST00000594250.1:c.718+1585G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000471399
  ensembl transcript: ENST00000600424
  gene symbol: CD22
  hgvsc: ENST00000600424.1:c.407-2955G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000339349
  ensembl transcript: ENST00000341773
  gene symbol: CD22
  hgvsc: ENST00000341773.6:c.718+1585G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000469523
  ensembl transcript: ENST00000599811
  gene symbol: CD22
  hgvsc: ENST00000599811.1:c.413-2955G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000598028
  gene symbol: CD22
  hgvsc: ENST00000598028.1:n.522G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000012124
  ensembl protein: ENSP00000085219
  ensembl transcript: ENST00000085219
  gene symbol: CD22
  hgvsc: ENST00000085219.5:c.890G>A
  hgvsp: ENSP00000085219.4:p.Arg297His
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000597433
  gene symbol: CD22
  hgvsc: ENST00000597433.1:n.431-2955G>A
  variant of: http://identifiers.org/hgnc/1643
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000012124
  ensembl transcript: ENST00000600655
  gene symbol: CD22
  hgvsc: ENST00000600655.1:n.37-2955G>A
  variant of: http://identifiers.org/hgnc/1643
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18844
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg297His
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1358
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 204
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9857
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16616
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 384
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.077549532028686e-5
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.624913e6

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16638
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 281
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1356
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46932
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7229
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

FS
type: SiteQuality
SIO_000300: 1.911e0

DP
type: SiteQuality
SIO_000300: 1.622945e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeDepth
all individuals: 444
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9632
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 558
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1312
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16632
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7098
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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Other
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Latino
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allele frequency: 0.0e0
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ReadPosRankSum
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QD
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -5.04e-1

MQ
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InbreedingCoeff
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SIO_000300: 6.3e-3

VQSLOD
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DP
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SIO_000300: 1.61226e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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FS
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.037851631326326e-5
allele num: 65836
num of homozygotes: 0

VQSLOD
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FS
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MQ
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DP
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ReadPosRankSum
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SIO_000300: 9.7e-1

InbreedingCoeff
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SIO_000300: -4.0e-4

BaseQRankSum
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SIO_000300: 9.29e-1

ClippingRankSum
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SIO_000300: -1.734e0

MQRankSum
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SIO_000300: 1.56e-1

QD
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SIO_000300: 1.159e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 3.515556336790297e-4
allele num: 11378
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.078657832350617e-5
allele num: 65804
num of homozygotes: 0

African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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FS
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SIO_000300: 7.653e0

ClippingRankSum
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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QD
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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allele num: 15358
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Latino
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East Asian
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Other
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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European (Non-Finnish)
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African
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allele num: 9726
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European (Finnish)
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DP
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FS
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

Latino
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allele frequency: 9.489466691971911e-5
allele num: 10538
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.247913215758875e-5
allele num: 61578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.928020565552699e-3
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.522093592043046e-5
allele num: 61330
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Other
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Latino
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East Asian
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South Asian
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European (Finnish)
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InbreedingCoeff
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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FS
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DP
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QD
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Other
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South Asian
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Latino
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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QD
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FS
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.238543472875898e-4
allele num: 8074
num of homozygotes: 0

ClippingRankSum
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SIO_000300: -3.94e-1

VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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QD
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BaseQRankSum
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SIO_000300: -1.084e0

DP
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SIO_000300: 8.99882e5

MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 8004
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.728421759069386e-5
allele num: 53642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.61e-1

DP
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SIO_000300: 8.97362e5

ClippingRankSum
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SIO_000300: 1.01e-1

FS
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SIO_000300: 6.887e0

InbreedingCoeff
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SIO_000300: -7.7e-3

QD
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SIO_000300: 1.371e1

GenotypeDepth
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bin: 3.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.705786026200873e-5
allele num: 58624
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8746
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

DP
type: SiteQuality
SIO_000300: 1.132436e6

QD
type: SiteQuality
SIO_000300: 4.78e0

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -2.189e0

GenotypeDepth
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bin: 2.5e0
variant carriers: 26

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 178

GenotypeDepth
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variant carriers: 56

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 101

GenotypeDepth
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variant carriers: 347

GenotypeDepth
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variant carriers: 334

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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variant carriers: 40

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1547

GenotypeQuality
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variant carriers: 31

Latino
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allele count: 11
allele frequency: 1.017576318223867e-3
allele num: 10810
num of homozygotes: 0

East Asian
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allele count: 944
allele frequency: 1.154034229828851e-1
allele num: 8180
num of homozygotes: 53

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

African
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allele count: 8
allele frequency: 9.031384059607134e-4
allele num: 8858
num of homozygotes: 0

South Asian
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allele count: 748
allele frequency: 8.214364155501867e-2
allele num: 9106
num of homozygotes: 40

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.870748758823331e-4
allele num: 59218
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 1.120448179271709e-2
allele num: 714
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.209211e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.36e0

InbreedingCoeff
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SIO_000300: 7.340000000000001e-2

VQSLOD
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SIO_000300: 5.89e0

MQRankSum
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SIO_000300: 6.0e-2

QD
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SIO_000300: 1.614e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10852
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 2.179598953792502e-3
allele num: 9176
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59332
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6030
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BaseQRankSum
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SIO_000300: -7.15e-1

DP
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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MQRankSum
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.680559290131756e-5
allele num: 59504
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.173913043478261e-4
allele num: 9200
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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East Asian
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European (Non-Finnish)
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South Asian
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DP
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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East Asian
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South Asian
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Latino
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Latino
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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East Asian
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Other
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South Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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South Asian
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Other
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European (Non-Finnish)
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -3.906e0

QD
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.237e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.141e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60612
num of homozygotes: 0

African
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allele count: 16
allele frequency: 1.76522506619594e-3
allele num: 9064
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.710027100271003e-4
allele num: 11070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

QD
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BaseQRankSum
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SIO_000300: -1.754e0

FS
type: SiteQuality
SIO_000300: 3.117e0

VQSLOD
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SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.33104e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

GenotypeDepth
all individuals: 32
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variant carriers: 15

GenotypeDepth
all individuals: 2079
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variant carriers: 666

GenotypeDepth
all individuals: 139
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variant carriers: 79

GenotypeDepth
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variant carriers: 20

GenotypeDepth
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variant carriers: 264

GenotypeDepth
all individuals: 13
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variant carriers: 7

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 145

GenotypeDepth
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GenotypeDepth
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variant carriers: 769

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

Other
type: Population
allele count: 28
allele frequency: 3.684210526315789e-2
allele num: 760
num of homozygotes: 2

Latino
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allele count: 196
allele frequency: 1.757217141832526e-2
allele num: 11154
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 1640
allele frequency: 2.684387992274201e-2
allele num: 61094
num of homozygotes: 19

East Asian
type: Population
allele count: 1247
allele frequency: 1.484170435610569e-1
allele num: 8402
num of homozygotes: 105

African
type: Population
allele count: 785
allele frequency: 8.540034812880766e-2
allele num: 9192
num of homozygotes: 32

South Asian
type: Population
allele count: 706
allele frequency: 7.082664526484751e-2
allele num: 9968
num of homozygotes: 34

European (Finnish)
type: Population
allele count: 137
allele frequency: 2.208252740167634e-2
allele num: 6204
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.68e-2

QD
type: SiteQuality
SIO_000300: 1.544e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.402444e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 26510
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variant carriers: 0

GenotypeDepth
all individuals: 8
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1788
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.629779327879005e-5
allele num: 61358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

QD
type: SiteQuality
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VQSLOD
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DP
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SIO_000300: 1.383057e6

ReadPosRankSum
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SIO_000300: 1.72e0

ClippingRankSum
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SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 295
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.898380494749955e-5
allele num: 11238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2099
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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East Asian
type: Population
allele count: 1
allele frequency: 1.177856301531213e-4
allele num: 8490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62012
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
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FS
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DP
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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SIO_000300: 1.92e-2

ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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Other
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Latino
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allele frequency: 3.550505947097461e-4
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East Asian
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VQSLOD
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QD
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DP
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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Other
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East Asian
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VQSLOD
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FS
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MQ
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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allele count: 0
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MQ
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VQSLOD
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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South Asian
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Other
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East Asian
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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Other
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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European (Finnish)
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Other
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African
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 3
allele frequency: 2.316602316602316e-4
allele num: 12950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 1.168e1

InbreedingCoeff
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SIO_000300: 3.4e-3

FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.938e0

DP
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SIO_000300: 1.478848e6

ReadPosRankSum
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SIO_000300: 6.900000000000001e-2

ClippingRankSum
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SIO_000300: -3.78e-1

MQRankSum
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SIO_000300: -3.85e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65312
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -4.73e-2

ReadPosRankSum
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SIO_000300: -4.1e-1

BaseQRankSum
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FS
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ClippingRankSum
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SIO_000300: -3.3e-2

QD
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SIO_000300: 1.133e1

MQRankSum
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SIO_000300: 1.56e0

InbreedingCoeff
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SIO_000300: 4.8e-3

DP
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SIO_000300: 1.49901e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514600751241973e-5
allele num: 66024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15412
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
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SIO_000300: 6.919e0

ReadPosRankSum
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SIO_000300: -1.804e0

MQRankSum
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VQSLOD
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SIO_000300: 9.44e-1

MQ
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SIO_000300: 6.06e1

ClippingRankSum
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SIO_000300: -1.463e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

DP
type: SiteQuality
SIO_000300: 1.524209e6

QD
type: SiteQuality
SIO_000300: 1.402e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.020418025854778e-5
allele num: 66216
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 1.82e0

BaseQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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MQ
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DP
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MQRankSum
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SIO_000300: -7.18e-1

FS
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SIO_000300: 2.457e0

ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509206157561123e-5
allele num: 66260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: 7.3e-3

VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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DP
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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FS
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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MQ
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FS
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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South Asian
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European (Finnish)
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 11560
num of homozygotes: 0

European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Other
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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African
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FS
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ReadPosRankSum
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QD
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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Other
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South Asian
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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QD
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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East Asian
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South Asian
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FS
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8642
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South Asian
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European (Non-Finnish)
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Other
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Latino
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African
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQ
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DP
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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African
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FS
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Latino
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Other
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East Asian
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FS
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 66616
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East Asian
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Other
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South Asian
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African
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Latino
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European (Finnish)
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ReadPosRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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FS
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.272e1

MQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

FS
type: SiteQuality
SIO_000300: 3.896e0

ReadPosRankSum
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SIO_000300: -7.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

DP
type: SiteQuality
SIO_000300: 1.552425e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.85e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001020346917952e-5
allele num: 66644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.45e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.55321e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.957e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 109

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 37

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 100

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1591

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 7
allele frequency: 6.734654608427939e-4
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.550331543100603e-4
allele num: 66658
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 9.911894273127754e-3
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 1096
allele frequency: 6.664234464307431e-2
allele num: 16446
num of homozygotes: 53

Latino
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allele count: 9
allele frequency: 7.782774126599793e-4
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 521
allele frequency: 6.041280148423005e-2
allele num: 8624
num of homozygotes: 14

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.989e0

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

DP
type: SiteQuality
SIO_000300: 1.602004e6

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 1.476e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.06e-2

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 797
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.595155709342561e-4
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 8.400000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.555988e6

QD
type: SiteQuality
SIO_000300: 1.134e1

FS
type: SiteQuality
SIO_000300: 4.475e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.163e0

ReadPosRankSum
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SIO_000300: -1.251e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1793
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variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.999880002399952e-5
allele num: 66668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.506e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.555632e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

BaseQRankSum
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SIO_000300: -1.056e0

QD
type: SiteQuality
SIO_000300: 1.364e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39710
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

DP
type: SiteQuality
SIO_000300: 1.555193e6

FS
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.73e0

MQ
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SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.56e1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 3.75e1
variant carriers: 1

GenotypeDepth
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bin: 2.75e1
variant carriers: 0

GenotypeDepth
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bin: 5.25e1
variant carriers: 1

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8713
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variant carriers: 0

GenotypeQuality
all individuals: 1978
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variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

FS
type: SiteQuality
SIO_000300: 6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 1.555454e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.401e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.94e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

VQSLOD
type: SiteQuality
SIO_000300: -6.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

QD
type: SiteQuality
SIO_000300: 1.146e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 5.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.555945e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.73190162798753e-4
allele num: 11548
num of homozygotes: 0

African
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allele count: 11
allele frequency: 1.057895749182535e-3
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

DP
type: SiteQuality
SIO_000300: 1.556604e6

FS
type: SiteQuality
SIO_000300: 3.995e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.402e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.245e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0