19-56614482-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614482
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614482
    reference: chr 19
allele count: 5
allele frequency: 4.301741344896414e-5
allele num: 116232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.105C>T
  hgvsp: ENST00000587279.1:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.79+26C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.79+26C>T
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala35Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

19-56614483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614483
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614483
    reference: chr 19
allele count: 2
allele frequency: 1.719483467166463e-5
allele num: 116314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.79+25C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.104C>T
  hgvsp: ENSP00000465647.1:p.Ala35Val
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.79+25C>T
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala35Val
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

19-56614492-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614492
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614492
    reference: chr 19
allele count: 1
allele frequency: 8.594314001856373e-6
allele num: 116356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.95C>G
  hgvsp: ENSP00000465647.1:p.Ala32Gly
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.79+16C>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.79+16C>G
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 50312
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala32Gly
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

19-56614496-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614496
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614496
    reference: chr 19
allele count: 3
allele frequency: 2.576611240895973e-5
allele num: 116432
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.79+12G>C
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.91G>C
  hgvsp: ENSP00000465647.1:p.Glu31Gln
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.79+12G>C
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43093
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 411
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Glu31Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

19-56614512-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614512
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614512
    reference: chr 19
allele count: 2
allele frequency: 1.732441703336683e-5
allele num: 115444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.75C>T
  hgvsp: ENST00000587279.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.75C>T
  hgvsp: ENST00000270459.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.75C>T
  hgvsp: ENST00000586787.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10907
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3811
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3310
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn25Asn
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

19-56614518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614518
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614518
    reference: chr 19
allele count: 2
allele frequency: 1.738948979236949e-5
allele num: 115012
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.69C>T
  hgvsp: ENST00000270459.3:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.69C>T
  hgvsp: ENST00000586787.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.69C>T
  hgvsp: ENST00000587279.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4011
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His23His
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-56614518-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614518
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614518
    reference: chr 19
allele count: 2
allele frequency: 1.738948979236949e-5
allele num: 115012
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.69C>G
  hgvsp: ENSP00000465647.1:p.His23Gln
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.69C>G
  hgvsp: ENSP00000471514.1:p.His23Gln
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.69C>G
  hgvsp: ENSP00000270459.3:p.His23Gln
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4011
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His23Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

19-56614525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614525
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614525
    reference: chr 19
allele count: 1
allele frequency: 8.744774996939329e-6
allele num: 114354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.62C>T
  hgvsp: ENSP00000471514.1:p.Ala21Val
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.62C>T
  hgvsp: ENSP00000465647.1:p.Ala21Val
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.62C>T
  hgvsp: ENSP00000270459.3:p.Ala21Val
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48874
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4259
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala21Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-56614529-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614529
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614529
    reference: chr 19
allele count: 1
allele frequency: 8.76731544800982e-6
allele num: 114060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.58A>G
  hgvsp: ENSP00000471514.1:p.Met20Val
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.58A>G
  hgvsp: ENSP00000270459.3:p.Met20Val
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.58A>G
  hgvsp: ENSP00000465647.1:p.Met20Val
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met20Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-56614552-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614552
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614552
    reference: chr 19
allele count: 5
allele frequency: 4.502638546188066e-5
allele num: 111046
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.35C>T
  hgvsp: ENSP00000270459.3:p.Pro12Leu
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.35C>T
  hgvsp: ENSP00000471514.1:p.Pro12Leu
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.35C>T
  hgvsp: ENSP00000465647.1:p.Pro12Leu
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro12Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

19-56614557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614557
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614557
    reference: chr 19
allele count: 3
allele frequency: 2.715128697100243e-5
allele num: 110492
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.30G>A
  hgvsp: ENST00000270459.3:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.30G>A
  hgvsp: ENST00000587279.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.30G>A
  hgvsp: ENST00000586787.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3802
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro10Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/19-56614557-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614557
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614557
    reference: chr 19
allele count: 2
allele frequency: 1.810085798066828e-5
allele num: 110492
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.30G>T
  hgvsp: ENST00000270459.3:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.30G>T
  hgvsp: ENST00000586787.1:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.30G>T
  hgvsp: ENST00000587279.1:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10843
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3802
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.75e1
  variant carriers: 1
hgvs: p.Pro10Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

19-56614574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614574
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614574
    reference: chr 19
allele count: 1
allele frequency: 9.207763986593496e-6
allele num: 108604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.13G>A
  hgvsp: ENSP00000471514.1:p.Glu5Lys
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.13G>A
  hgvsp: ENSP00000465647.1:p.Glu5Lys
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.13G>A
  hgvsp: ENSP00000270459.3:p.Glu5Lys
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu5Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

19-56614577-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614577
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614577
    reference: chr 19
allele count: 1
allele frequency: 9.244707405010632e-6
allele num: 108170
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.10C>T
  hgvsp: ENSP00000270459.3:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.10C>T
  hgvsp: ENSP00000471514.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.10C>T
  hgvsp: ENSP00000465647.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2211
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
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genotype quality: GenotypeQuality
  all individuals: 3880
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
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genotype quality: GenotypeQuality
  all individuals: 291
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genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 421
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 78
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genotype quality: GenotypeQuality
  all individuals: 299
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 229
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genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg4Trp
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

19-56614586-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614586
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614586
    reference: chr 19
allele count: 1
allele frequency: 9.3463184851487e-6
allele num: 106994
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.1A>G
  hgvsp: ENSP00000471514.1:p.Met1?
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.1A>G
  hgvsp: ENSP00000270459.3:p.Met1?
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.1A>G
  hgvsp: ENSP00000465647.1:p.Met1?
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
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genotype quality: GenotypeQuality
  all individuals: 146
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genotype quality: GenotypeQuality
  all individuals: 203
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4804
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 201
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3448
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genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 229
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genotype quality: GenotypeQuality
  all individuals: 79
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genotype quality: GenotypeQuality
  all individuals: 445
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 692
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 175
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genotype quality: GenotypeQuality
  all individuals: 44720
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

19-56614587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614587
    reference: chr 19
allele count: 1
allele frequency: 9.359790340696368e-6
allele num: 106840
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-1C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
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genotype depth: GenotypeDepth
  all individuals: 27
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
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genotype quality: GenotypeQuality
  all individuals: 79
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genotype quality: GenotypeQuality
  all individuals: 206
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 46
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genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

19-56614594-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614594
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614594
    reference: chr 19
allele count: 1
allele frequency: 9.496676163342831e-6
allele num: 105300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-8A>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-8A>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-8A>G
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34061
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 9.75e1
  variant carriers: 1
hgvs: c.-8A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-56614599-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614599
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614599
    reference: chr 19
allele count: 4
allele frequency: 3.847411653809899e-5
allele num: 103966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-3C>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-3C>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-13C>G
  variant of: http://identifiers.org/hgnc/26998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 82
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 35953
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 64
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 2.75e1
  variant carriers: 0
hgvs: c.-10-3C>G
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-56614605-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614605
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614605
    reference: chr 19
allele count: 2
allele frequency: 1.946282600233554e-5
allele num: 102760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-19T>C
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-9T>C
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-9T>C
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-56614606-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614606
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614606
    reference: chr 19
allele count: 2
allele frequency: 1.947836927092464e-5
allele num: 102678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-20C>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-10C>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-10C>G
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

19-56614612-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614612
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614612
    reference: chr 19
allele count: 58
allele frequency: 5.732471485896144e-4
allele num: 101178
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-16C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-16C>T
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16313
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4405
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6282
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11885
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4313
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21841
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

19-56614618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614618
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614618
    reference: chr 19
allele count: 1
allele frequency: 1.001321744703008e-5
allele num: 99868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11499
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1722
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 7402
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 316
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/19-56614623-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614623
    reference: chr 19
allele count: 6
allele frequency: 6.078042060051055e-5
allele num: 98716
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-27T>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-37T>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-27T>G
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17396
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13962
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4024
  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 694
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-56614623-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614623
    reference: chr 19
allele count: 1
allele frequency: 1.013007010008509e-5
allele num: 98716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-27T>C
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-27T>C
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-37T>C
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13962
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 17396
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 537
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-56614624-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614622
    reference: chr 19
allele count: 1
allele frequency: 1.017936032899693e-5
allele num: 98238
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-30_-10-29delCT
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-40_-39delCT
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-30_-10-29delCT
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 17313
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: CAG
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/19-56614625-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614625
    reference: chr 19
allele count: 1
allele frequency: 1.019575856443719e-5
allele num: 98080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-29T>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-29T>G
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-39T>G
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 929
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 307
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 5049
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genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 822
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 8157
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 11791
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 12633
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6530
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-56614634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614634
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614634
    reference: chr 19
allele count: 2
allele frequency: 2.123187328818022e-5
allele num: 94198
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-38C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-38C>T
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15515
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9920
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2218
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5035
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 302
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1380
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genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

19-56614637-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56614637
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56614637
    reference: chr 19
allele count: 1
allele frequency: 1.074806534823732e-5
allele num: 93040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000465647
  ensembl transcript: ENST00000587279
  gene symbol: ZNF787
  hgvsc: ENST00000587279.1:c.-10-41C>A
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000471514
  ensembl transcript: ENST00000586787
  gene symbol: ZNF787
  hgvsc: ENST00000586787.1:c.-51C>A
  variant of: http://identifiers.org/hgnc/26998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142409
  ensembl protein: ENSP00000270459
  ensembl transcript: ENST00000270459
  gene symbol: ZNF787
  hgvsc: ENST00000270459.3:c.-10-41C>A
  variant of: http://identifiers.org/hgnc/26998
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12261
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3637
  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 65
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genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-56658243-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658243
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658243
    reference: chr 19
allele count: 3
allele frequency: 3.393665158371041e-3
allele num: 884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.213-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.-22-16G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5517G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 8
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

19-56658260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658260
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658260
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 1024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.214C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5534C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
hgvs: c.-21C>T
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-56658278-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658278
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658278
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 1910
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5552C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.232C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33051
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS

19-56658298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658298
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658298
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 3298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.18C>T
  hgvsp: ENST00000587467.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.18C>T
  hgvsp: ENST00000586123.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.18C>T
  hgvsp: ENST00000588358.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.18C>T
  hgvsp: ENST00000588203.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.252C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.18C>T
  hgvsp: ENST00000337080.3:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.18C>T
  hgvsp: ENST00000591564.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.18C>T
  hgvsp: ENST00000593100.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.18C>T
  hgvsp: ENST00000592949.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5572C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20810
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro6Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

19-56658299-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658299
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658299
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 3410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.19G>A
  hgvsp: ENSP00000466287.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.253G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.19G>A
  hgvsp: ENSP00000468069.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.19G>A
  hgvsp: ENSP00000465171.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.19G>A
  hgvsp: ENSP00000338860.3:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.19G>A
  hgvsp: ENSP00000465070.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5573G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.19G>A
  hgvsp: ENSP00000468762.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.19G>A
  hgvsp: ENSP00000466666.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.19G>A
  hgvsp: ENSP00000465466.1:p.Val7Met
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20835
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val7Met
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

19-56658308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658308
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658308
    reference: chr 19
allele count: 1
allele frequency: 2.655337227827934e-4
allele num: 3766
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.28G>A
  hgvsp: ENSP00000338860.3:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.28G>A
  hgvsp: ENSP00000465070.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.262G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.28G>A
  hgvsp: ENSP00000468762.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.28G>A
  hgvsp: ENSP00000466666.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.28G>A
  hgvsp: ENSP00000465466.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.28G>A
  hgvsp: ENSP00000465171.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5582G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.28G>A
  hgvsp: ENSP00000468069.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.28G>A
  hgvsp: ENSP00000466287.1:p.Glu10Lys
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28968
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu10Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-56658313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658313
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658313
    reference: chr 19
allele count: 1
allele frequency: 2.630194634402946e-4
allele num: 3802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.33C>T
  hgvsp: ENST00000592949.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.33C>T
  hgvsp: ENST00000588358.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.267C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.33C>T
  hgvsp: ENST00000591564.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.33C>T
  hgvsp: ENST00000337080.3:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.33C>T
  hgvsp: ENST00000593100.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.33C>T
  hgvsp: ENST00000587467.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.33C>T
  hgvsp: ENST00000588203.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5587C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.33C>T
  hgvsp: ENST00000586123.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19663
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28860
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala11Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-56658316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658316
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658316
    reference: chr 19
allele count: 1
allele frequency: 2.539360081259522e-4
allele num: 3938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5590G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.36G>A
  hgvsp: ENST00000587467.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.36G>A
  hgvsp: ENST00000593100.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.36G>A
  hgvsp: ENST00000591564.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.36G>A
  hgvsp: ENST00000586123.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.36G>A
  hgvsp: ENST00000592949.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.270G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.36G>A
  hgvsp: ENST00000337080.3:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.36G>A
  hgvsp: ENST00000588203.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.36G>A
  hgvsp: ENST00000588358.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu12Glu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

19-56658333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658333
    reference: chr 19
allele count: 2
allele frequency: 4.589261128958238e-4
allele num: 4358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.53C>T
  hgvsp: ENSP00000465070.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.53C>T
  hgvsp: ENSP00000466287.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.53C>T
  hgvsp: ENSP00000465466.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.53C>T
  hgvsp: ENSP00000468069.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.287C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.53C>T
  hgvsp: ENSP00000468762.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5607C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.53C>T
  hgvsp: ENSP00000466666.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.53C>T
  hgvsp: ENSP00000465171.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.53C>T
  hgvsp: ENSP00000338860.3:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser18Phe
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

19-56658335-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658335
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658335
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 4510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.55C>T
  hgvsp: ENSP00000465070.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.289C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.55C>T
  hgvsp: ENSP00000468069.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.55C>T
  hgvsp: ENSP00000465171.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.55C>T
  hgvsp: ENSP00000466666.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.55C>T
  hgvsp: ENSP00000338860.3:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.55C>T
  hgvsp: ENSP00000466287.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.55C>T
  hgvsp: ENSP00000465466.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.55C>T
  hgvsp: ENSP00000468762.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5609C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29231
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro19Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

19-56658337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658337
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658337
    reference: chr 19
allele count: 1
allele frequency: 2.141327623126338e-4
allele num: 4670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.57G>A
  hgvsp: ENST00000588203.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.57G>A
  hgvsp: ENST00000592949.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.57G>A
  hgvsp: ENST00000586123.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.57G>A
  hgvsp: ENST00000588358.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.57G>A
  hgvsp: ENST00000591564.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.57G>A
  hgvsp: ENST00000593100.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.57G>A
  hgvsp: ENST00000337080.3:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.57G>A
  hgvsp: ENST00000587467.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5611G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.291G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19307
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Pro19Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

19-56658340-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658340
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658340
    reference: chr 19
allele count: 1
allele frequency: 2.095557418273261e-4
allele num: 4772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5614G>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.294G>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.60G>T
  hgvsp: ENSP00000468069.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.60G>T
  hgvsp: ENSP00000465466.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.60G>T
  hgvsp: ENSP00000465171.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.60G>T
  hgvsp: ENSP00000466287.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.60G>T
  hgvsp: ENSP00000338860.3:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.60G>T
  hgvsp: ENSP00000468762.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.60G>T
  hgvsp: ENSP00000465070.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.60G>T
  hgvsp: ENSP00000466666.1:p.Trp20Cys
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19513
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp20Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-56658342-A-ACCGCTTCCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658342
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658351
    reference: chr 19
allele count: 1
allele frequency: 2.055921052631579e-4
allele num: 4864
alternate allele: ACCGCTTCCG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.305_313dupGCCGCTTCC
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000466666.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000466287.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000465171.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000338860.3:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000468762.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000465070.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000465466.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.71_79dupGCCGCTTCC
  hgvsp: ENSP00000468069.1:p.Arg24_Phe26dup
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13617
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3220
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg24_Phe26dup
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/19-56658352-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658352
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658352
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 5984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.306C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.72C>A
  hgvsp: ENST00000588358.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.72C>A
  hgvsp: ENST00000588203.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.72C>A
  hgvsp: ENST00000592949.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.72C>A
  hgvsp: ENST00000591564.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5626C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.72C>A
  hgvsp: ENST00000337080.3:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.72C>A
  hgvsp: ENST00000586123.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.72C>A
  hgvsp: ENST00000593100.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.72C>A
  hgvsp: ENST00000587467.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26995
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2046
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg24Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-56658361-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658361
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658361
    reference: chr 19
allele count: 1
allele frequency: 1.349527665317139e-4
allele num: 7410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.81C>T
  hgvsp: ENST00000591564.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.81C>T
  hgvsp: ENST00000592949.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.315C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.81C>T
  hgvsp: ENST00000593100.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.81C>T
  hgvsp: ENST00000337080.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.81C>T
  hgvsp: ENST00000586123.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.81C>T
  hgvsp: ENST00000587467.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.81C>T
  hgvsp: ENST00000588358.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5635C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.81C>T
  hgvsp: ENST00000588203.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25024
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His27His
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-56658370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658370
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658370
    reference: chr 19
allele count: 1
allele frequency: 1.058873358746294e-4
allele num: 9444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.90C>T
  hgvsp: ENST00000587467.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.90C>T
  hgvsp: ENST00000593100.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.90C>T
  hgvsp: ENST00000592949.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.324C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5644C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.90C>T
  hgvsp: ENST00000586123.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.90C>T
  hgvsp: ENST00000337080.3:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.90C>T
  hgvsp: ENST00000588203.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.90C>T
  hgvsp: ENST00000591564.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.90C>T
  hgvsp: ENST00000588358.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27521
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Asp30Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

19-56658374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658374
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658374
    reference: chr 19
allele count: 115
allele frequency: 9.800579512527698e-3
allele num: 11734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.94C>T
  hgvsp: ENSP00000468762.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.94C>T
  hgvsp: ENSP00000465070.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.94C>T
  hgvsp: ENSP00000338860.3:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.94C>T
  hgvsp: ENSP00000466666.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5648C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.94C>T
  hgvsp: ENSP00000465466.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.94C>T
  hgvsp: ENSP00000468069.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.94C>T
  hgvsp: ENSP00000466287.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.94C>T
  hgvsp: ENSP00000465171.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.328C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 29975
  bin: 7.5e0
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19277
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 1.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 2.75e1
  variant carriers: 5
hgvs: p.Pro32Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-56658375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658375
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658375
    reference: chr 19
allele count: 1
allele frequency: 8.347245409015025e-5
allele num: 11980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.95C>T
  hgvsp: ENSP00000465466.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.95C>T
  hgvsp: ENSP00000338860.3:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.95C>T
  hgvsp: ENSP00000466666.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.95C>T
  hgvsp: ENSP00000465070.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.95C>T
  hgvsp: ENSP00000465171.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5649C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.95C>T
  hgvsp: ENSP00000468069.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.95C>T
  hgvsp: ENSP00000466287.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.329C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.95C>T
  hgvsp: ENSP00000468762.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18874
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro32Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

19-56658376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658376
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658376
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 12714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.96G>A
  hgvsp: ENST00000587467.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.96G>A
  hgvsp: ENST00000586123.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.96G>A
  hgvsp: ENST00000593100.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.96G>A
  hgvsp: ENST00000337080.3:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.96G>A
  hgvsp: ENST00000591564.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.96G>A
  hgvsp: ENST00000588203.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.96G>A
  hgvsp: ENST00000592949.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.330G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.96G>A
  hgvsp: ENST00000588358.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5650G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30967
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Pro32Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

19-56658378-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658378
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658378
    reference: chr 19
allele count: 1
allele frequency: 7.359434795407713e-5
allele num: 13588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.98G>A
  hgvsp: ENSP00000465070.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.98G>A
  hgvsp: ENSP00000466287.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.98G>A
  hgvsp: ENSP00000468069.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.98G>A
  hgvsp: ENSP00000468762.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5652G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.98G>A
  hgvsp: ENSP00000338860.3:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.98G>A
  hgvsp: ENSP00000465171.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.98G>A
  hgvsp: ENSP00000465466.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.98G>A
  hgvsp: ENSP00000466666.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.332G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly33Asp
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-56658379-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658379
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658379
    reference: chr 19
allele count: 96
allele frequency: 6.793093688083782e-3
allele num: 14132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.99C>T
  hgvsp: ENST00000588203.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.99C>T
  hgvsp: ENST00000337080.3:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.333C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.99C>T
  hgvsp: ENST00000586123.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.99C>T
  hgvsp: ENST00000591564.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.99C>T
  hgvsp: ENST00000588358.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.99C>T
  hgvsp: ENST00000593100.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.99C>T
  hgvsp: ENST00000592949.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.99C>T
  hgvsp: ENST00000587467.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5653C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17484
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31544
  bin: 7.5e0
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 1.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 2.75e1
  variant carriers: 4
hgvs: p.Gly33Gly
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-56658391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658391
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658391
    reference: chr 19
allele count: 1
allele frequency: 4.644250417982538e-5
allele num: 21532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.345G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.111G>A
  hgvsp: ENST00000592949.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.111G>A
  hgvsp: ENST00000588358.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.111G>A
  hgvsp: ENST00000593100.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.111G>A
  hgvsp: ENST00000587467.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.111G>A
  hgvsp: ENST00000591564.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.111G>A
  hgvsp: ENST00000588203.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.111G>A
  hgvsp: ENST00000337080.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5665G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.111G>A
  hgvsp: ENST00000586123.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala37Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

19-56658395-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658395
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658395
    reference: chr 19
allele count: 1
allele frequency: 4.113195129976966e-5
allele num: 24312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.115G>C
  hgvsp: ENSP00000465070.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.115G>C
  hgvsp: ENSP00000466666.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.115G>C
  hgvsp: ENSP00000468069.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.115G>C
  hgvsp: ENSP00000468762.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.349G>C
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.115G>C
  hgvsp: ENSP00000465466.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5669G>C
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.115G>C
  hgvsp: ENSP00000465171.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.115G>C
  hgvsp: ENSP00000466287.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.115G>C
  hgvsp: ENSP00000338860.3:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11090
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2003
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly39Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

19-56658403-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658403
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658403
    reference: chr 19
allele count: 1
allele frequency: 3.453992815694943e-5
allele num: 28952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.123C>T
  hgvsp: ENST00000586123.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.123C>T
  hgvsp: ENST00000593100.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.123C>T
  hgvsp: ENST00000587467.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.123C>T
  hgvsp: ENST00000337080.3:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.123C>T
  hgvsp: ENST00000588203.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5677C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.357C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.123C>T
  hgvsp: ENST00000592949.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.123C>T
  hgvsp: ENST00000591564.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.123C>T
  hgvsp: ENST00000588358.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu41Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

19-56658409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658409
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658409
    reference: chr 19
allele count: 1
allele frequency: 2.819124943617501e-5
allele num: 35472
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.129C>T
  hgvsp: ENST00000337080.3:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5683C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.129C>T
  hgvsp: ENST00000586123.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.363C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.129C>T
  hgvsp: ENST00000588203.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.129C>T
  hgvsp: ENST00000593100.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.129C>T
  hgvsp: ENST00000588358.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.129C>T
  hgvsp: ENST00000591564.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.129C>T
  hgvsp: ENST00000592949.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.129C>T
  hgvsp: ENST00000587467.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala43Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-56658412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658412
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658412
    reference: chr 19
allele count: 8
allele frequency: 2.073505779897361e-4
allele num: 38582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.132G>A
  hgvsp: ENST00000593100.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465466
  ensembl transcript: ENST00000588203
  gene symbol: ZNF444
  hgvsc: ENST00000588203.1:c.132G>A
  hgvsp: ENST00000588203.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.132G>A
  hgvsp: ENST00000591564.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.132G>A
  hgvsp: ENST00000337080.3:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.132G>A
  hgvsp: ENST00000588358.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.132G>A
  hgvsp: ENST00000586123.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5686G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.132G>A
  hgvsp: ENST00000592949.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.132G>A
  hgvsp: ENST00000587467.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.366G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33438
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10416
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6303
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6531
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu44Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

19-56658419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658419
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658419
    reference: chr 19
allele count: 1
allele frequency: 2.125127507650459e-5
allele num: 47056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.139G>A
  hgvsp: ENSP00000465171.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.139G>A
  hgvsp: ENSP00000338860.3:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5693G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.139G>A
  hgvsp: ENSP00000466666.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.139G>A
  hgvsp: ENSP00000466287.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.139G>A
  hgvsp: ENSP00000468762.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.139G>A
  hgvsp: ENSP00000468069.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.139G>A
  hgvsp: ENSP00000465070.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.373G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp47Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-56658433-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658433
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658433
    reference: chr 19
allele count: 1
allele frequency: 1.697677577074562e-5
allele num: 58904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.387C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.153C>T
  hgvsp: ENST00000586123.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.153C>T
  hgvsp: ENST00000587467.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.153C>T
  hgvsp: ENST00000591564.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.153C>T
  hgvsp: ENST00000337080.3:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.153C>T
  hgvsp: ENST00000592949.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.153C>T
  hgvsp: ENST00000593100.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.153C>T
  hgvsp: ENST00000588358.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5707C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19434
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro51Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/19-56658445-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658445
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658445
    reference: chr 19
allele count: 2
allele frequency: 2.99526747738573e-5
allele num: 66772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.165C>A
  hgvsp: ENST00000586123.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.165C>A
  hgvsp: ENST00000591564.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.165C>A
  hgvsp: ENST00000592949.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5719C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.399C>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.165C>A
  hgvsp: ENST00000593100.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.165C>A
  hgvsp: ENST00000337080.3:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.165C>A
  hgvsp: ENST00000587467.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.165C>A
  hgvsp: ENST00000588358.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22533
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3526
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr55Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

19-56658484-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658484
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658484
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 60930
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.204C>G
  hgvsp: ENSP00000468069.1:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.204C>G
  hgvsp: ENSP00000466287.1:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.204C>G
  hgvsp: ENSP00000466666.1:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.204C>G
  hgvsp: ENSP00000465171.1:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.204C>G
  hgvsp: ENSP00000468762.1:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.204C>G
  hgvsp: ENSP00000465070.1:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.204C>G
  hgvsp: ENSP00000338860.3:p.Phe68Leu
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.438C>G
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5758C>G
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24060
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15494
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34818
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe68Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

19-56658487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658487
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658487
    reference: chr 19
allele count: 2
allele frequency: 3.345600535296086e-5
allele num: 59780
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.207G>C
  hgvsp: ENST00000587467.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.207G>C
  hgvsp: ENST00000586123.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.207G>C
  hgvsp: ENST00000337080.3:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.207G>C
  hgvsp: ENST00000592949.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.207G>C
  hgvsp: ENST00000593100.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.441G>C
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.207G>C
  hgvsp: ENST00000588358.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.207G>C
  hgvsp: ENST00000591564.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5761G>C
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8106
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35236
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu69Leu
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-56658490-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658490
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658490
    reference: chr 19
allele count: 1
allele frequency: 1.797914419273643e-5
allele num: 55620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.210C>G
  hgvsp: ENSP00000465070.1:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.210C>G
  hgvsp: ENSP00000468762.1:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5764C>G
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.444C>G
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.210C>G
  hgvsp: ENSP00000465171.1:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.210C>G
  hgvsp: ENSP00000468069.1:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.210C>G
  hgvsp: ENSP00000338860.3:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.210C>G
  hgvsp: ENSP00000466666.1:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.210C>G
  hgvsp: ENSP00000466287.1:p.Ser70Arg
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17070
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7791
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6344
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser70Arg
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-56658490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658490
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658490
    reference: chr 19
allele count: 26
allele frequency: 4.674577490111471e-4
allele num: 55620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.210C>T
  hgvsp: ENST00000591564.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.210C>T
  hgvsp: ENST00000592949.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.210C>T
  hgvsp: ENST00000337080.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.210C>T
  hgvsp: ENST00000587467.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5764C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.444C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.210C>T
  hgvsp: ENST00000593100.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.210C>T
  hgvsp: ENST00000586123.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.210C>T
  hgvsp: ENST00000588358.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17070
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser70Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

19-56658492-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658492
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658492
    reference: chr 19
allele count: 2
allele frequency: 3.755022342382937e-5
allele num: 53262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.212C>T
  hgvsp: ENSP00000465171.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.212C>T
  hgvsp: ENSP00000338860.3:p.Ala71Val
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.212C>T
  hgvsp: ENSP00000465070.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.212C>T
  hgvsp: ENSP00000468762.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.446C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.212C>T
  hgvsp: ENSP00000466287.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466666
  ensembl transcript: ENST00000586123
  gene symbol: ZNF444
  hgvsc: ENST00000586123.1:c.212C>T
  hgvsp: ENST00000586123.1:c.212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5766C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.212C>T
  hgvsp: ENSP00000468069.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24739
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala71Val
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-56658493-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658493
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658493
    reference: chr 19
allele count: 3
allele frequency: 5.686556979300932e-5
allele num: 52756
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.213G>A
  hgvsp: ENST00000337080.3:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.213G>A
  hgvsp: ENST00000593100.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.213G>A
  hgvsp: ENST00000592949.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.213G>A
  hgvsp: ENST00000587467.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.447G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.213G>A
  hgvsp: ENST00000588358.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.213G>A
  hgvsp: ENST00000591564.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5767G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17524
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala71Ala
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

19-56658493-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658493
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658493
    reference: chr 19
allele count: 1
allele frequency: 1.895518993100311e-5
allele num: 52756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.213G>C
  hgvsp: ENST00000587467.1:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.213G>C
  hgvsp: ENST00000337080.3:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.447G>C
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.213G>C
  hgvsp: ENST00000593100.1:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.213G>C
  hgvsp: ENST00000592949.1:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.213G>C
  hgvsp: ENST00000591564.1:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5767G>C
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000466287
  ensembl transcript: ENST00000588358
  gene symbol: ZNF444
  hgvsc: ENST00000588358.1:c.213G>C
  hgvsp: ENST00000588358.1:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17524
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8643
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala71Ala
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

19-56658499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658499
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658499
    reference: chr 19
allele count: 4
allele frequency: 8.287750704458811e-5
allele num: 48264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.219C>T
  hgvsp: ENST00000593100.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.453C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.219C>T
  hgvsp: ENST00000591564.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5773C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.219C>T
  hgvsp: ENST00000592949.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.219C>T
  hgvsp: ENST00000337080.3:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.219C>T
  hgvsp: ENST00000587467.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17698
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9547
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro73Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

19-56658502-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658502
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658502
    reference: chr 19
allele count: 1
allele frequency: 2.199929602252728e-5
allele num: 45456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5776C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.456C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.222C>T
  hgvsp: ENST00000337080.3:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.222C>T
  hgvsp: ENST00000592949.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.222C>T
  hgvsp: ENST00000593100.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468762
  ensembl transcript: ENST00000591564
  gene symbol: ZNF444
  hgvsc: ENST00000591564.1:c.222C>T
  hgvsp: ENST00000591564.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.222C>T
  hgvsp: ENST00000587467.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12176
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33836
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala74Ala
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

19-56658520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658520
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658520
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 26988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5794G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.240G>A
  hgvsp: ENST00000592949.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.240G>A
  hgvsp: ENST00000337080.3:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.474G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.240G>A
  hgvsp: ENST00000593100.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.240G>A
  hgvsp: ENST00000587467.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 16370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26334
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val80Val
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

19-56658527-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658527
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658527
    reference: chr 19
allele count: 1
allele frequency: 5.367686527106817e-5
allele num: 18630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465070
  ensembl transcript: ENST00000593100
  gene symbol: ZNF444
  hgvsc: ENST00000593100.1:c.247C>T
  hgvsp: ENSP00000465070.1:p.Arg83Trp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.247C>T
  hgvsp: ENSP00000468069.1:p.Arg83Trp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000465171
  ensembl transcript: ENST00000587467
  gene symbol: ZNF444
  hgvsc: ENST00000587467.1:c.247C>T
  hgvsp: ENSP00000465171.1:p.Arg83Trp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5801C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.247C>T
  hgvsp: ENSP00000338860.3:p.Arg83Trp
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.481C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3254
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg83Trp
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

19-56658588-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658588
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658588
    reference: chr 19
allele count: 4
allele frequency: 9.945300845350571e-4
allele num: 4022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.297+11C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5862C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.531+11C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.297+11C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38997
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11439
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37657
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8226
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

19-56658596-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658596
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658596
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 2934
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.297+19C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5870C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.531+19C>T
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.297+19C>T
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39841
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2003
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3895
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37083
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD

19-56658622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56658622
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56658622
    reference: chr 19
allele count: 2
allele frequency: 1.189060642092747e-3
allele num: 1682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.531+45G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.297+45G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.45+5896G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.297+45G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38158
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1927
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
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genotype quality: GenotypeQuality
  all individuals: 6
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genotype quality: GenotypeQuality
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

19-56662265-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56662265
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 56662265
    reference: chr 19
allele count: 13
allele frequency: 7.68321513002364e-3
allele num: 1692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587664
  gene symbol: ZNF444
  hgvsc: ENST00000587664.1:n.46-7598G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000338860
  ensembl transcript: ENST00000337080
  gene symbol: ZNF444
  hgvsc: ENST00000337080.3:c.297+3688G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl transcript: ENST00000587195
  gene symbol: ZNF444
  hgvsc: ENST00000587195.1:n.531+3688G>A
  variant of: http://identifiers.org/hgnc/16052
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167685
  ensembl protein: ENSP00000468069
  ensembl transcript: ENST00000592949
  gene symbol: ZNF444
  hgvsc: ENST00000592949.1:c.297+3688G>A
  variant of: http://identifiers.org/hgnc/16052
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS

GenotypeQuality
all individuals: 83
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 1
allele frequency: 8.776549060909251e-5
allele num: 11394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.172267999876555e-5
allele num: 64806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.337809e6

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

FS
type: SiteQuality
SIO_000300: 5.907e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

QD
type: SiteQuality
SIO_000300: 9.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 50601
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.083469519903795e-5
allele num: 64862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.277e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 8.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.504e-1

DP
type: SiteQuality
SIO_000300: 1.339192e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
all individuals: 294
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53955106690889e-5
allele num: 64954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15212
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.336478e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 6.63e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65006
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.50385423966363e-4
allele num: 8562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.59e-1

DP
type: SiteQuality
SIO_000300: 1.337193e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 6.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

GenotypeQuality
all individuals: 49602
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.081949024563134e-5
allele num: 64894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.143e1

DP
type: SiteQuality
SIO_000300: 1.320138e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

FS
type: SiteQuality
SIO_000300: 8.288e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
all individuals: 49328
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.319572536963841e-5
allele num: 13662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543114622554163e-5
allele num: 64804
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.173e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.315873e6

QD
type: SiteQuality
SIO_000300: 8.52e0

GenotypeQuality
all individuals: 49328
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64804
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.319572536963841e-5
allele num: 13662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.173e0

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.315873e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

QD
type: SiteQuality
SIO_000300: 8.52e0

GenotypeQuality
all individuals: 217
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.040366208905535e-4
allele num: 9612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64700
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.738e0

QD
type: SiteQuality
SIO_000300: 1.37e1

MQRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQ
type: SiteQuality
SIO_000300: 5.859e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.30953e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.498e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.799095304944626e-5
allele num: 12822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

DP
type: SiteQuality
SIO_000300: 1.307202e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

QD
type: SiteQuality
SIO_000300: 1.527e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 206
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6184
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.749781277340332e-4
allele num: 11430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.38790837401427e-5
allele num: 10652
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.350176263219741e-4
allele num: 8510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.166e1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.074e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

FS
type: SiteQuality
SIO_000300: 2.619e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.287498e6

GenotypeQuality
all individuals: 48303
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.761170492377782e-5
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.1379440190787e-5
allele num: 63736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
type: SiteQuality
SIO_000300: 1.283546e6

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

QD
type: SiteQuality
SIO_000300: 7.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.1684e1

GenotypeQuality
all individuals: 205
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175640724194686e-4
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56897200953935e-5
allele num: 63736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
type: SiteQuality
SIO_000300: 1.283546e6

VQSLOD
type: SiteQuality
SIO_000300: -1.6e0

QD
type: SiteQuality
SIO_000300: 7.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

FS
type: SiteQuality
SIO_000300: 1.1684e1

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584484725567246e-5
allele num: 63112
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.919e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.065e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

QD
type: SiteQuality
SIO_000300: 1.019e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 1.258788e6

VQSLOD
type: SiteQuality
SIO_000300: -1.062e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-1

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.588865232450984e-5
allele num: 62938
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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FS
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 9316
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European (Non-Finnish)
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allele frequency: 1.603232115945747e-5
allele num: 62374
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6004
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Other
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East Asian
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South Asian
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Latino
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.122838535818549e-4
allele num: 8906
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Other
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Latino
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allele frequency: 0.0e0
allele num: 11240
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African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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DP
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ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 9.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.674e0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61484
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Other
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 1.085776330076004e-4
allele num: 9210
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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DP
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 9090
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Latino
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allele frequency: 2.726281352235551e-4
allele num: 11004
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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BaseQRankSum
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QD
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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African
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allele num: 8978
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Latino
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East Asian
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Other
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allele frequency: 0.0e0
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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East Asian
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South Asian
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African
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allele frequency: 2.224694104560623e-4
allele num: 8990
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Other
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allele frequency: 0.0e0
allele num: 720
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European (Finnish)
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allele frequency: 0.0e0
allele num: 5784
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 60012
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QD
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.22e-1

MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

South Asian
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African
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allele frequency: 5.756207674943566e-3
allele num: 8860
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 8.442808415791429e-5
allele num: 59222
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Latino
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allele frequency: 1.863932898415657e-4
allele num: 10730
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
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QD
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BaseQRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.710922529427867e-5
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Latino
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East Asian
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African
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South Asian
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Other
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QD
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DP
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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MQ
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

South Asian
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East Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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African
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MQRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Latino
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South Asian
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Other
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European (Non-Finnish)
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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Latino
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Other
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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QD
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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Other
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DP
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BaseQRankSum
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VQSLOD
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FS
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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South Asian
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -1.029e0

QD
type: SiteQuality
SIO_000300: 1.888e1

MQRankSum
type: SiteQuality
SIO_000300: 9.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 8.93749e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 882
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.336183858898984e-4
allele num: 7484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.95003e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.282e1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.634e0

MQRankSum
type: SiteQuality
SIO_000300: -6.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.77e-1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1052
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 6

African
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allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.777777777777778e-2
allele num: 36
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.174603174603175e-3
allele num: 630
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.96e-2

DP
type: SiteQuality
SIO_000300: 1.39536e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.635e1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.68869e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.29e-2

FS
type: SiteQuality
SIO_000300: 3.68e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.869e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.850000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.094e1

DP
type: SiteQuality
SIO_000300: 2.20706e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.896e0

QD
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 1.508e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 2.43572e5

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.510000000000001e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.763e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.49e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.27e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.44567e5

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.240694789081886e-3
allele num: 806
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1832
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.794e0

FS
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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DP
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QD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.382131324004305e-4
allele num: 1858
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.660000000000001e-2

VQSLOD
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DP
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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MQRankSum
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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ReadPosRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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East Asian
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Other
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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European (Finnish)
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FS
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ClippingRankSum
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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Latino
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Other
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ClippingRankSum
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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African
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Other
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ReadPosRankSum
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QD
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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East Asian
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Other
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African
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.003205128205128e-4
allele num: 4992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.63e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

DP
type: SiteQuality
SIO_000300: 3.23533e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.687e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1908
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 95
allele frequency: 1.466049382716049e-2
allele num: 6480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.436426116838488e-3
allele num: 582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1028
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.784735812133072e-4
allele num: 1022
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.571428571428571e-2
allele num: 84
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 2.325581395348837e-2
allele num: 602
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.382e1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

FS
type: SiteQuality
SIO_000300: 1.538e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.92e-2

DP
type: SiteQuality
SIO_000300: 3.56511e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1101
bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6662
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 5.149330587023687e-4
allele num: 1942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-2

DP
type: SiteQuality
SIO_000300: 3.62768e5

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

FS
type: SiteQuality
SIO_000300: 6.421e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.003e0

VQSLOD
type: SiteQuality
SIO_000300: -2.854e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

QD
type: SiteQuality
SIO_000300: 2.45e0

GenotypeQuality
all individuals: 17952
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GenotypeQuality
all individuals: 172
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1545
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GenotypeQuality
all individuals: 38
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 3.72131e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

MQ
type: SiteQuality
SIO_000300: 5.79e1

VQSLOD
type: SiteQuality
SIO_000300: -1.405e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.71e1

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1311
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GenotypeQuality
all individuals: 1
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 8.403361344537816e-4
allele num: 1190
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

VQSLOD
type: SiteQuality
SIO_000300: -1.635e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.75e-2

QD
type: SiteQuality
SIO_000300: 8.369999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.79567e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 29071
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GenotypeQuality
all individuals: 2059
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 197
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 90

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 7

GenotypeQuality
all individuals: 1499
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 88
allele frequency: 1.102756892230576e-2
allele num: 7980
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.021148036253776e-3
allele num: 662
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.677852348993289e-3
allele num: 1192
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.846153846153846e-3
allele num: 780
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 9.09090909090909e-3
allele num: 110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2170
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.85525e5

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.406e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.61e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.23e0

QD
type: SiteQuality
SIO_000300: 1.353e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1696
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South Asian
type: Population
allele count: 1
allele frequency: 3.265839320705421e-4
allele num: 3062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 936
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

DP
type: SiteQuality
SIO_000300: 4.66639e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.84e-2

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.622e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33930
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GenotypeQuality
all individuals: 284
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3334
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 1908
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2174
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Latino
type: Population
allele count: 1
allele frequency: 6.180469715698393e-4
allele num: 1618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14052
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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FS
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ClippingRankSum
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SIO_000300: 1.43e-1

BaseQRankSum
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DP
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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SIO_000300: -2.637e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 3.861003861003861e-4
allele num: 2590
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-2

DP
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 3.750937734433609e-4
allele num: 2666
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.566015868770616e-4
allele num: 22434
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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QD
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 27238
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3918
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1912
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.625487646293888e-4
allele num: 6152
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

InbreedingCoeff
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SIO_000300: -1.33e-2

MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
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MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 8000
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele num: 33736
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Other
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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FS
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 9168
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Latino
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Other
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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South Asian
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Latino
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African
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.216054544285071e-5
allele num: 31094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.44814e5

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

QD
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SIO_000300: 9.970000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 26

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.216054544285071e-5
allele num: 31094
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.133611691022964e-4
allele num: 7664
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.973164956590371e-4
allele num: 5068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2354
num of homozygotes: 0

East Asian
type: Population
allele count: 17
allele frequency: 3.626279863481229e-3
allele num: 4688
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

DP
type: SiteQuality
SIO_000300: 6.44814e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.727664155005382e-5
allele num: 29728
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.569e0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
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SIO_000300: -1.96e-2

DP
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SIO_000300: 6.23545e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

QD
type: SiteQuality
SIO_000300: 1.294e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.253267237494367e-4
allele num: 4438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.77323218639935e-5
allele num: 29528
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: -1.405e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

FS
type: SiteQuality
SIO_000300: 2.864e0

DP
type: SiteQuality
SIO_000300: 6.23076e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 3
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.253267237494367e-4
allele num: 4438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: -1.405e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

FS
type: SiteQuality
SIO_000300: 2.864e0

DP
type: SiteQuality
SIO_000300: 6.23076e5

BaseQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

QD
type: SiteQuality
SIO_000300: 4.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 22
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.116071428571429e-4
allele num: 26880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3826
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.484560570071259e-4
allele num: 6736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1998
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

QD
type: SiteQuality
SIO_000300: 3.164e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

DP
type: SiteQuality
SIO_000300: 5.76026e5

VQSLOD
type: SiteQuality
SIO_000300: -1.31e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2255
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.443792766373412e-4
allele num: 4092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25318
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.5204e5

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

QD
type: SiteQuality
SIO_000300: 1.418e1

FS
type: SiteQuality
SIO_000300: 3.819e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.22e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1910
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4292
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15160
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.88e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 525
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.46969696969697e-5
allele num: 10560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.87274e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 22
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.792114695340502e-3
allele num: 2232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 4.071e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.11246e5

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.33e-2

QD
type: SiteQuality
SIO_000300: 1.413e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.76e-2

DP
type: SiteQuality
SIO_000300: 1.84207e5

QD
type: SiteQuality
SIO_000300: 6.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.125e-1

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.851851851851852e-2
allele num: 108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.053e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.003e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.47781e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

FS
type: SiteQuality
SIO_000300: 4.172e0

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.787878787878788e-2
allele num: 132
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.125e-2
allele num: 64
num of homozygotes: 1

African
type: Population
allele count: 5
allele frequency: 1.506024096385542e-2
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

DP
type: SiteQuality
SIO_000300: 3.1734e4

FS
type: SiteQuality
SIO_000300: 6.104e0