X-128674850-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128674850
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128674850
    reference: chr 0
allele count: 1
allele frequency: 1.169057389027227e-5
allele num: 85539
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.119+50C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.119+50C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.91+934C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

X-128678899-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678899
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678899
    reference: chr 0
allele count: 1
allele frequency: 1.25768761555005e-5
allele num: 79511
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-36A>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-36A>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-36A>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

X-128678899-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678899
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678899
    reference: chr 0
allele count: 1
allele frequency: 1.25768761555005e-5
allele num: 79511
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-36A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-36A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-36A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

X-128678907-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678907
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678907
    reference: chr 0
allele count: 1055
allele frequency: 1.365483678910719e-2
allele num: 77262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-28T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-28T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-28T>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 20753
  bin: 2.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1076
genotype quality: GenotypeQuality
  all individuals: 574
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  variant carriers: 14
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

X-128678909-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678909
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678909
    reference: chr 0
allele count: 4
allele frequency: 4.872700694359849e-5
allele num: 82090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-26C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-26C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-26C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

X-128678910-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678910
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678910
    reference: chr 0
allele count: 1
allele frequency: 1.210961624626116e-5
allele num: 82579
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-25T>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-25T>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-25T>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-128678910-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678910
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678910
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 82579
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-25T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-25T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-25T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 187
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

X-128678913-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678913
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678913
    reference: chr 0
allele count: 1
allele frequency: 1.207321195730912e-5
allele num: 82828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-22G>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-22G>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-22G>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

X-128678914-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678914
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678914
    reference: chr 0
allele count: 1
allele frequency: 1.203861989261551e-5
allele num: 83066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-21A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-21A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-21A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
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site quality: QD
site quality: FS
site quality: InbreedingCoeff
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X-128678914-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678914
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678914
    reference: chr 0
allele count: 1
allele frequency: 1.203861989261551e-5
allele num: 83066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-21A>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-21A>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
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  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-21A>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
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site quality: QD
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site quality: FS
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X-128678921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678921
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678921
    reference: chr 0
allele count: 1
allele frequency: 1.188043529914936e-5
allele num: 84172
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-14C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-14C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-14C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
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X-128678931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678931
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678931
    reference: chr 0
allele count: 3
allele frequency: 3.513209668353007e-5
allele num: 85392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-4C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-4C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-4C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
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filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.120-4C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
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site quality: InbreedingCoeff
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X-128678932-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678932
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678932
    reference: chr 0
allele count: 1
allele frequency: 1.16982323970848e-5
allele num: 85483
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.92-3T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.120-3T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.120-3T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
hgvs: c.120-3T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

X-128678967-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678967
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678967
    reference: chr 0
allele count: 23
allele frequency: 2.646629000149592e-4
allele num: 86903
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.152A>G
  hgvsp: ENSP00000360154.4:p.His51Arg
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.124A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.152A>G
  hgvsp: ENSP00000349635.5:p.His51Arg
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.75e1
  variant carriers: 1
hgvs: p.His51Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

X-128678987-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678987
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678987
    reference: chr 0
allele count: 3
allele frequency: 3.456340656935148e-5
allele num: 86797
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.172A>G
  hgvsp: ENSP00000349635.5:p.Ile58Val
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.172A>G
  hgvsp: ENSP00000360154.4:p.Ile58Val
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.144A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile58Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

X-128678990-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678990
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678990
    reference: chr 0
allele count: 1
allele frequency: 1.152591602217586e-5
allele num: 86761
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.175A>G
  hgvsp: ENSP00000349635.5:p.Asn59Asp
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.147A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.175A>G
  hgvsp: ENSP00000360154.4:p.Asn59Asp
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn59Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

X-128678995-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128678995
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128678995
    reference: chr 0
allele count: 1
allele frequency: 1.154587754442276e-5
allele num: 86611
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.180C>G
  hgvsp: ENSP00000360154.4:p.Ser60Arg
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.152C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.180C>G
  hgvsp: ENSP00000349635.5:p.Ser60Arg
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8764
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser60Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

X-128679002-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679002
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679002
    reference: chr 0
allele count: 1
allele frequency: 1.157903268760928e-5
allele num: 86363
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.159A>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.187A>C
  hgvsp: ENST00000371113.4:c.187A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.187A>C
  hgvsp: ENST00000357121.5:c.187A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 34676
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg63Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

X-128679012-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679012
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679012
    reference: chr 0
allele count: 1
allele frequency: 1.164727395553071e-5
allele num: 85857
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.169A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.197A>G
  hgvsp: ENSP00000360154.4:p.Gln66Arg
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.197A>G
  hgvsp: ENSP00000349635.5:p.Gln66Arg
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
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  variant carriers: 0
hgvs: p.Gln66Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

X-128679018-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679018
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679018
    reference: chr 0
allele count: 7
allele frequency: 8.197777231259295e-5
allele num: 85389
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+4C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+4C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+4C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.199+4C>G
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

X-128679030-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679030
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679030
    reference: chr 0
allele count: 15249
allele frequency: 1.818344422980611e-1
allele num: 83862
alternate allele: G
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+16C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+16C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+16C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 2.75e1
  variant carriers: 1078
genotype depth: GenotypeDepth
  all individuals: 287
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 152
genotype quality: GenotypeQuality
  all individuals: 21331
  bin: 6.25e1
  variant carriers: 317
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 4.25e1
  variant carriers: 114
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 57
num of homozygotes: 2761
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

X-128679046-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679046
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679046
    reference: chr 0
allele count: 308
allele frequency: 3.752070948250658e-3
allele num: 82088
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+32A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+32A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+32A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 13984
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2803
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11391
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17885
  bin: 6.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7065
  bin: 9.75e1
  variant carriers: 248
genotype quality: GenotypeQuality
  all individuals: 4691
  bin: 3.25e1
  variant carriers: 3
num of homozygotes: 3
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ

X-128679049-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679049
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679050
    reference: chr 0
allele count: 1
allele frequency: 1.228999471530227e-5
allele num: 81367
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+41dupT
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+41dupT
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+41dupT
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8457
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6902
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10909
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14017
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

X-128679058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679058
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679058
    reference: chr 0
allele count: 2
allele frequency: 2.514458134272064e-5
allele num: 79540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+44C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+44C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+44C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1220
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

X-128679059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679059
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679059
    reference: chr 0
allele count: 3
allele frequency: 3.801317790167258e-5
allele num: 78920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+45G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+45G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+45G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9060
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

X-128679060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128679060
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128679060
    reference: chr 0
allele count: 1
allele frequency: 1.26350369574831e-5
allele num: 79145
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.199+46G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.171+46G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.199+46G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-128682490-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682490
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682490
    reference: chr 0
allele count: 4
allele frequency: 4.559443747862761e-5
allele num: 87730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-50T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-50T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-50T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

X-128682513-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682513
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682513
    reference: chr 0
allele count: 4
allele frequency: 4.559028015227153e-5
allele num: 87738
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-27C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-27C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-27C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 4
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

X-128682516-ACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682516
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682514
    reference: chr 0
allele count: 1
allele frequency: 1.139782985319595e-5
allele num: 87736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-19_200-18delCT
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-19_172-18delCT
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-19_200-18delCT
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: ACT
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-128682518-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682518
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682518
    reference: chr 0
allele count: 1
allele frequency: 1.139782985319595e-5
allele num: 87736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-22T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-22T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-22T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

X-128682521-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682521
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682522
    reference: chr 0
allele count: 15
allele frequency: 1.710805447204544e-4
allele num: 87678
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-11dupT
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-11dupT
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-11dupT
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

X-128682522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682522
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682522
    reference: chr 0
allele count: 1
allele frequency: 1.141031492469192e-5
allele num: 87640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-18T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-18T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-18T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS

X-128682529-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682529
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682529
    reference: chr 0
allele count: 2
allele frequency: 2.279488026989138e-5
allele num: 87739
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-11T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-11T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-11T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

X-128682532-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682532
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682530
    reference: chr 0
allele count: 2
allele frequency: 2.279539988830254e-5
allele num: 87737
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-4_172-3delTC
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-4_200-3delTC
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-4_200-3delTC
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: c.200-4_200-3delTC
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: CCT
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

X-128682536-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682536
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682536
    reference: chr 0
allele count: 1
allele frequency: 1.139795976520203e-5
allele num: 87735
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.172-4T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.200-4T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.200-4T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3388
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33565
  bin: 9.75e1
  variant carriers: 1
hgvs: c.200-4T>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-128682545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682545
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682545
    reference: chr 0
allele count: 1
allele frequency: 1.139834951898965e-5
allele num: 87732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.177G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.205G>A
  hgvsp: ENSP00000349635.5:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.205G>A
  hgvsp: ENSP00000360154.4:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8914
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4326
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genotype quality: GenotypeQuality
  all individuals: 33565
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu69Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

X-128682575-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682575
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682575
    reference: chr 0
allele count: 2
allele frequency: 2.279981760145919e-5
allele num: 87720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.235A>G
  hgvsp: ENSP00000349635.5:p.Asn79Asp
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.207A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.235A>G
  hgvsp: ENSP00000360154.4:p.Asn79Asp
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8461
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn79Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

X-128682616-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682616
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682616
    reference: chr 0
allele count: 1
allele frequency: 1.141409183778293e-5
allele num: 87611
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.238+38C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.238+38C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.210+38C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2658
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3519
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2687
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-128682620-T-TATTTACTTGAACACTCACTAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682620
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682641
    reference: chr 0
allele count: 5
allele frequency: 5.706720233747261e-5
allele num: 87616
alternate allele: TATTTACTTGAACACTCACTAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-128682626-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128682626
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128682626
    reference: chr 0
allele count: 1
allele frequency: 1.142087049874942e-5
allele num: 87559
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.238+48C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.210+48C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.238+48C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

X-128691251-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691251
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691251
    reference: chr 0
allele count: 1
allele frequency: 1.249219237976265e-5
allele num: 80050
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.481-51T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.239-51T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.239-51T>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

X-128691275-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691275
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691275
    reference: chr 0
allele count: 1
allele frequency: 1.222284694551055e-5
allele num: 81814
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.239-27A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.481-27A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.239-27A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

X-128691282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691282
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691282
    reference: chr 0
allele count: 59
allele frequency: 7.103983046765882e-4
allele num: 83052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.239-20T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.239-20T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.481-20T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27055
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12739
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
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  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1500
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  variant carriers: 3
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6083
  bin: 9.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36269
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1306
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

X-128691283-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691283
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691283
    reference: chr 0
allele count: 1
allele frequency: 1.2017930752683e-5
allele num: 83209
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.481-19G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.239-19G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.239-19G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4422
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 837
  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 564
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

X-128691284-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691284
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691284
    reference: chr 0
allele count: 2
allele frequency: 2.397276693675984e-5
allele num: 83428
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.239-18G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.239-18G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.481-18G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

X-128691294-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691294
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691294
    reference: chr 0
allele count: 2
allele frequency: 2.351668508806999e-5
allele num: 85046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.239-8C>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.481-8C>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.239-8C>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1130
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 9.25e1
  variant carriers: 0
hgvs: c.239-8C>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum

X-128691307-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691307
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691307
    reference: chr 0
allele count: 1
allele frequency: 1.157501186438716e-5
allele num: 86393
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.244T>C
  hgvsp: ENSP00000360154.4:p.Cys82Arg
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.244T>C
  hgvsp: ENSP00000349635.5:p.Cys82Arg
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.486T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys82Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

X-128691324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691324
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691324
    reference: chr 0
allele count: 1
allele frequency: 1.149649931595829e-5
allele num: 86983
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.261G>A
  hgvsp: ENST00000357121.5:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.261G>A
  hgvsp: ENST00000371113.4:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.503G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 407
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 559
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genotype quality: GenotypeQuality
  all individuals: 859
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln87Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ

X-128691328-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691328
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691328
    reference: chr 0
allele count: 5
allele frequency: 5.746267799064508e-5
allele num: 87013
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.265G>C
  hgvsp: ENSP00000349635.5:p.Asp89His
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.265G>C
  hgvsp: ENSP00000360154.4:p.Asp89His
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.507G>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31801
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 300
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4862
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp89His
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP

X-128691346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691346
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691346
    reference: chr 0
allele count: 2
allele frequency: 2.300516465946605e-5
allele num: 86937
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.283C>T
  hgvsp: ENSP00000349635.5:p.Arg95Cys
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.525C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.283C>T
  hgvsp: ENSP00000360154.4:p.Arg95Cys
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 142
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genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 42344
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg95Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

X-128691347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691347
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691347
    reference: chr 0
allele count: 3
allele frequency: 3.451052571034165e-5
allele num: 86930
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.284G>A
  hgvsp: ENSP00000360154.4:p.Arg95His
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.526G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.284G>A
  hgvsp: ENSP00000349635.5:p.Arg95His
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg95His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-128691384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691384
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691384
    reference: chr 0
allele count: 1
allele frequency: 1.170398286536909e-5
allele num: 85441
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.563C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.321C>T
  hgvsp: ENST00000357121.5:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.321C>T
  hgvsp: ENST00000371113.4:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe107Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

X-128691387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691387
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691387
    reference: chr 0
allele count: 7
allele frequency: 8.232775856796745e-5
allele num: 85026
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.324C>T
  hgvsp: ENST00000371113.4:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.566C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.324C>T
  hgvsp: ENST00000357121.5:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu108Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-128691412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691412
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691412
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 81081
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349G>A
  hgvsp: ENSP00000349635.5:p.Ala117Thr
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349G>A
  hgvsp: ENSP00000360154.4:p.Ala117Thr
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala117Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-128691416-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691416
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691416
    reference: chr 0
allele count: 1
allele frequency: 1.242513854029472e-5
allele num: 80482
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+4A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+4A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+4A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: c.349+4A>G
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: QD

X-128691430-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691430
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691429
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 75966
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+19delA
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+19delA
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+19delA
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: GA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
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X-128691438-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691438
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691438
    reference: chr 0
allele count: 1
allele frequency: 1.364610199096628e-5
allele num: 73281
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+26T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+26T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+26T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

X-128691443-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691443
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691443
    reference: chr 0
allele count: 3
allele frequency: 4.176760504552669e-5
allele num: 71826
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+31C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+31C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+31C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10580
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

X-128691444-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691444
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691444
    reference: chr 0
allele count: 10
allele frequency: 1.399638893165563e-4
allele num: 71447
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+32T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+32T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+32T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 872
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

X-128691445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691445
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691445
    reference: chr 0
allele count: 12
allele frequency: 1.686340640809444e-4
allele num: 71160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+33A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+33A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+33A>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

X-128691447-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691447
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691447
    reference: chr 0
allele count: 1
allele frequency: 1.418379359743557e-5
allele num: 70503
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+35T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+35T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+35T>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

X-128691452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691452
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691452
    reference: chr 0
allele count: 5
allele frequency: 7.297778556207491e-5
allele num: 68514
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+40C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+40C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+40C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-128691453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691453
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691453
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 68197
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.349+41G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.349+41G>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.591+41G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 529
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3807
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

X-128691795-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691795
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691795
    reference: chr 0
allele count: 3
allele frequency: 3.418374904570367e-5
allele num: 87761
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350-43T>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592-43T>A
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350-43T>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

X-128691801-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691801
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691801
    reference: chr 0
allele count: 2
allele frequency: 2.278864669621595e-5
allele num: 87763
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350-37A>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350-37A>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592-37A>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-128691832-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691832
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691832
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350-6C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350-6C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592-6C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: c.350-6C>G
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-128691833-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691833
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691833
    reference: chr 0
allele count: 5
allele frequency: 5.697161674053986e-5
allele num: 87763
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592-5T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350-5T>C
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350-5T>C
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: c.350-5T>C
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

X-128691834-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691834
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691834
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350-4C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350-4C>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592-4C>G
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29236
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: c.350-4C>G
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

X-128691837-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691837
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691837
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592-1G>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350-1G>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350-1G>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29235
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: c.350-1G>T
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-128691838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691838
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691838
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.592C>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.350C>T
  hgvsp: ENSP00000349635.5:p.Ala117Val
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.350C>T
  hgvsp: ENSP00000360154.4:p.Ala117Val
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5300
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  variant carriers: 0
hgvs: p.Ala117Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-128691839-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691839
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691839
    reference: chr 0
allele count: 4
allele frequency: 4.557729339243189e-5
allele num: 87763
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.593T>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.351T>G
  hgvsp: ENST00000371113.4:c.351T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.351T>G
  hgvsp: ENST00000357121.5:c.351T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3272
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genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
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  variant carriers: 0
hgvs: c.351T>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-128691863-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691863
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691863
    reference: chr 0
allele count: 1
allele frequency: 1.139406369281604e-5
allele num: 87765
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.375G>A
  hgvsp: ENST00000357121.5:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.375G>A
  hgvsp: ENST00000371113.4:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.617G>A
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu125Glu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

X-128691863-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691863
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691863
    reference: chr 0
allele count: 86
allele frequency: 9.798894775821796e-4
allele num: 87765
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.617G>T
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.375G>T
  hgvsp: ENSP00000349635.5:p.Glu125Asp
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.375G>T
  hgvsp: ENSP00000360154.4:p.Glu125Asp
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 5
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu125Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-128691887-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691887
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691887
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.399C>T
  hgvsp: ENST00000371113.4:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.399C>T
  hgvsp: ENST00000357121.5:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.641C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1459
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hgvs: p.Tyr133Tyr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

X-128691911-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691911
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691911
    reference: chr 0
allele count: 2
allele frequency: 2.279176305683126e-5
allele num: 87751
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.665A>G
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.423A>G
  hgvsp: ENST00000371113.4:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.423A>G
  hgvsp: ENST00000357121.5:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
hgvs: p.Lys141Lys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

X-128691913-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691913
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691913
    reference: chr 0
allele count: 1
allele frequency: 1.139627114008296e-5
allele num: 87748
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.425C>T
  hgvsp: ENSP00000360154.4:p.Pro142Leu
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.425C>T
  hgvsp: ENSP00000349635.5:p.Pro142Leu
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.667C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29202
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3273
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13986
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2908
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro142Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD

X-128691916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24128691916
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24128691916
    reference: chr 0
allele count: 1
allele frequency: 1.139666077839193e-5
allele num: 87745
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000349635
  ensembl transcript: ENST00000357121
  gene symbol: OCRL
  hgvsc: ENST00000357121.5:c.428C>T
  hgvsp: ENSP00000349635.5:p.Ser143Phe
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122126
  ensembl protein: ENSP00000360154
  ensembl transcript: ENST00000371113
  gene symbol: OCRL
  hgvsc: ENST00000371113.4:c.428C>T
  hgvsp: ENSP00000360154.4:p.Ser143Phe
  variant of: http://identifiers.org/hgnc/8108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122126
  ensembl transcript: ENST00000486673
  gene symbol: OCRL
  hgvsc: ENST00000486673.1:n.670C>T
  variant of: http://identifiers.org/hgnc/8108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser143Phe
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 4013
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9941
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.531159087429184e-4
allele num: 6531
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46696
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.839e0

DP
type: SiteQuality
SIO_000300: 1.882708e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

GenotypeQuality
all individuals: 1497
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3867
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.137397634212921e-4
allele num: 8792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.816e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

DP
type: SiteQuality
SIO_000300: 1.93865e6

VQSLOD
type: SiteQuality
SIO_000300: -2.625e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

GenotypeQuality
all individuals: 8322
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3867
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.339290727051558e-5
allele num: 42748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.816e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.625e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 1.93865e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 1102
bin: 9.25e1
variant carriers: 32

European (Non-Finnish)
type: Population
allele count: 595
allele frequency: 1.439736733854381e-2
allele num: 41327
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.283113823749866e-4
allele num: 9339
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 3.598484848484849e-2
allele num: 528
num of homozygotes: 0

East Asian
type: Population
allele count: 26
allele frequency: 4.160665706513042e-3
allele num: 6249
num of homozygotes: 0

African
type: Population
allele count: 174
allele frequency: 2.392410284614327e-2
allele num: 7273
num of homozygotes: 0

Latino
type: Population
allele count: 18
allele frequency: 2.040122407344441e-3
allele num: 8823
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 219
allele frequency: 5.882352941176471e-2
allele num: 3723
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.339e2

QD
type: SiteQuality
SIO_000300: 2.8e0

FS
type: SiteQuality
SIO_000300: 1.68576e2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.097e0

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 5.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.842e0

DP
type: SiteQuality
SIO_000300: 1.870578e6

GenotypeQuality
all individuals: 1151
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6377
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 585
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9373
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.366863905325444e-4
allele num: 4225
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.761172838114986e-5
allele num: 44371
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8909
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.884e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.918e0

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

QD
type: SiteQuality
SIO_000300: 3.44e0

FS
type: SiteQuality
SIO_000300: 7.0893e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.506e0

DP
type: SiteQuality
SIO_000300: 1.854351e6

VQSLOD
type: SiteQuality
SIO_000300: -2.527e1

GenotypeQuality
all individuals: 1640
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.321801718133271e-4
allele num: 4307
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 593
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44669
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8299
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8933
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.22e0

DP
type: SiteQuality
SIO_000300: 1.859899e6

VQSLOD
type: SiteQuality
SIO_000300: -6.949e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
all individuals: 739
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 593
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8299
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4307
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44669
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8933
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 7.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.859899e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.949e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 8723
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4302
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.204238921001927e-4
allele num: 8304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8959
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6413
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 2.8122e1

VQSLOD
type: SiteQuality
SIO_000300: -5.177e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.699e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 1.877652e6

GenotypeQuality
all individuals: 743
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4311
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9435
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.202935161794779e-4
allele num: 8313
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45005
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8985
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6423
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.883121e6

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.111e1

FS
type: SiteQuality
SIO_000300: 7.662e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.91e-1

GenotypeQuality
all individuals: 363
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6423
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9435
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.22197533607377e-5
allele num: 45005
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8985
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8313
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.91e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.883121e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele frequency: 1.19717466778403e-4
allele num: 8353
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45733
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6487
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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SIO_000300: -3.198e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.075e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.471e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
type: SiteQuality
SIO_000300: 1.922662e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4449
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9163
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46531
num of homozygotes: 0

South Asian
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allele frequency: 3.105268605734396e-4
allele num: 9661
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 2.613e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

DP
type: SiteQuality
SIO_000300: 1.955357e6

FS
type: SiteQuality
SIO_000300: 1.078e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.46e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.965e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6559
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46595
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.034340091021928e-4
allele num: 9668
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9168
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8423
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DP
type: SiteQuality
SIO_000300: 1.95718e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.316e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.78e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47543
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 2.331474911302585e-3
allele num: 9865
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4511
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 2.07e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.254e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.076e1

DP
type: SiteQuality
SIO_000300: 1.994512e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 3
allele frequency: 3.237642995898986e-4
allele num: 9266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47453
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9853
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8486
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6605
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4507
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.897e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 1.990388e6

FS
type: SiteQuality
SIO_000300: 9.954000000000001e0

QD
type: SiteQuality
SIO_000300: 1.487e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

GenotypeQuality
all individuals: 5665
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.108592514496573e-5
allele num: 47425
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4506
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9853
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9261
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6605
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e0

VQSLOD
type: SiteQuality
SIO_000300: -4.055e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.988985e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

FS
type: SiteQuality
SIO_000300: 9.272e0

QD
type: SiteQuality
SIO_000300: 1.333e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

GenotypeQuality
all individuals: 186
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.113360666131282e-5
allele num: 47318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4501
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9254
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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South Asian
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DP
type: SiteQuality
SIO_000300: 1.985076e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.115e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-2

QD
type: SiteQuality
SIO_000300: 1.099e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.122060945590357e-5
allele num: 47124
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
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African
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4498
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DP
type: SiteQuality
SIO_000300: 1.976057e6

VQSLOD
type: SiteQuality
SIO_000300: -3.412e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.052e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.029e1

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.138671457290731e-5
allele num: 46758
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4476
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Latino
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allele frequency: 0.0e0
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South Asian
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.59e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6589
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.508328126010041e-4
allele num: 46409
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9171
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4453
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Other
type: Population
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allele num: 619
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.2337e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.5e-2

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.358e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.935142e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 200

Other
type: Population
allele count: 67
allele frequency: 1.101973684210526e-1
allele num: 608
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East Asian
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allele count: 4975
allele frequency: 7.679839456622415e-1
allele num: 6478
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European (Non-Finnish)
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allele count: 731
allele frequency: 1.609246009906439e-2
allele num: 45425
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African
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allele count: 4925
allele frequency: 5.84708536151015e-1
allele num: 8423
num of homozygotes: 1133

European (Finnish)
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allele count: 135
allele frequency: 3.072371415566682e-2
allele num: 4394
num of homozygotes: 0

Latino
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allele count: 2021
allele frequency: 2.255076991742914e-1
allele num: 8962
num of homozygotes: 179

South Asian
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allele count: 2395
allele frequency: 2.502089427496866e-1
allele num: 9572
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MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

FS
type: SiteQuality
SIO_000300: 7.61e-1

QD
type: SiteQuality
SIO_000300: 2.619e1

DP
type: SiteQuality
SIO_000300: 2.092587e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.937e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.974e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.07e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 3

Latino
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allele count: 14
allele frequency: 1.57799819657349e-3
allele num: 8872
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.250478226623158e-5
allele num: 44435
num of homozygotes: 0

South Asian
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African
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allele frequency: 3.533100204992162e-2
allele num: 8293
num of homozygotes: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 597
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4333
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East Asian
type: Population
allele count: 0
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allele num: 6280
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.376e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele frequency: 1.087665869045029e-4
allele num: 9194
num of homozygotes: 0

Latino
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Other
type: Population
allele count: 0
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African
type: Population
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East Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43990
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4312
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.602e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 8195
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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Other
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MQ
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FS
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BaseQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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Other
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African
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East Asian
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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Latino
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East Asian
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BaseQRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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East Asian
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African
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
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FS
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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Latino
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European (Non-Finnish)
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East Asian
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DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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Other
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DP
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VQSLOD
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ClippingRankSum
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MQ
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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Other
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European (Non-Finnish)
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allele frequency: 2.084071441969031e-5
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South Asian
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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QD
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DP
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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allele num: 4529
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African
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Other
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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DP
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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MQRankSum
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DP
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MQ
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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QD
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FS
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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Other
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African
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European (Finnish)
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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South Asian
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Other
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East Asian
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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South Asian
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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South Asian
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African
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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variant carriers: 1

Latino
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allele num: 9320
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African
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East Asian
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European (Finnish)
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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QD
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DP
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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African
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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European (Finnish)
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allele frequency: 2.208968411751712e-4
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Other
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DP
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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African
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Latino
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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East Asian
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South Asian
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African
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European (Non-Finnish)
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allele frequency: 2.27009602506186e-5
allele num: 44051
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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African
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South Asian
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East Asian
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European (Finnish)
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QD
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MQ
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FS
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VQSLOD
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DP
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InbreedingCoeff
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GenotypeQuality
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South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.223428658816333e-3
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Latino
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European (Finnish)
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allele count: 1
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African
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allele num: 8190
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East Asian
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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GenotypeQuality
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variant carriers: 0

South Asian
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European (Non-Finnish)
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Latino
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East Asian
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Other
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African
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European (Finnish)
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allele frequency: 0.0e0
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DP
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MQRankSum
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MQ
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 4.349906477010744e-5
allele num: 45978
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Other
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Latino
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African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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FS
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MQ
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ReadPosRankSum
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DP
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VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -2.08e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9103
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.272317518637985e-5
allele num: 46813
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Other
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African
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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MQRankSum
type: SiteQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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DP
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 0

Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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African
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East Asian
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DP
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InbreedingCoeff
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FS
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QD
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VQSLOD
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MQ
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
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Latino
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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DP
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GenotypeQuality
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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MQ
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QD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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DP
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GenotypeQuality
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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East Asian
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South Asian
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Latino
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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DP
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QD
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SIO_000300: 1.281e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8371
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47008
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9409
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4402
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9112
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.530221882172915e-4
allele num: 6535
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.677226e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.732e1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.346e0

VQSLOD
type: SiteQuality
SIO_000300: -1.576e0

QD
type: SiteQuality
SIO_000300: 8.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.013e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.104362230811706e-4
allele num: 9055
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4376
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8357
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46775
num of homozygotes: 0

South Asian
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allele frequency: 6.417112299465241e-4
allele num: 9350
num of homozygotes: 0

MQRankSum
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.47e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.400000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.665226e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8893
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 571
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 44544
num of homozygotes: 0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.555813e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.56e-2

QD
type: SiteQuality
SIO_000300: 2.953e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8119
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8479
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 44179
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4105
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 569
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6175
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.129177958446251e-4
allele num: 8856
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.532512e6

MQ
type: SiteQuality
SIO_000300: 5.883e1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.377e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.685e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.744e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3880
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7881
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 551
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 41618
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8387
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.399762e6

MQ
type: SiteQuality
SIO_000300: 6.072e1

QD
type: SiteQuality
SIO_000300: 1.343e1

MQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40068
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 531
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.791793585378964e-4
allele num: 5581
num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.310227e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.34e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.139e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7279
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 519
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.645649625363168e-5
allele num: 39238
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

DP
type: SiteQuality
SIO_000300: 1.275693e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.831e0

VQSLOD
type: SiteQuality
SIO_000300: -2.561e0

MQRankSum
type: SiteQuality
SIO_000300: -1.306e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 1.305312622373058e-4
allele num: 7661
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.945525291828794e-3
allele num: 514
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 2.051176862724988e-4
allele num: 39002
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7939
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7253
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5428
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 1.902e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

DP
type: SiteQuality
SIO_000300: 1.266577e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

FS
type: SiteQuality
SIO_000300: 6.691e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7917
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5401
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3631
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 38847
num of homozygotes: 0

African
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allele count: 8
allele frequency: 1.046709407300798e-3
allele num: 7643
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 5.548619780829519e-4
allele num: 7209
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 512
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FS
type: SiteQuality
SIO_000300: 3.818e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.600036400509607e-5
allele num: 38461
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 510
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.247687e6

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 1.339692406623439e-4
allele num: 37322
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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InbreedingCoeff
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ReadPosRankSum
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FS
type: SiteQuality
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DP
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.250390649415588e-5
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East Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 9324
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European (Non-Finnish)
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allele count: 2
allele frequency: 4.166840285011876e-5
allele num: 47998
num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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African
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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FS
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MQ
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InbreedingCoeff
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DP
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Latino
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East Asian
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Other
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European (Finnish)
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FS
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MQ
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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African
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InbreedingCoeff
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QD
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FS
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MQ
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VQSLOD
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DP
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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DP
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Latino
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European (Non-Finnish)
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Other
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South Asian
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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African
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South Asian
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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FS
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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GenotypeQuality
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Latino
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European (Finnish)
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African
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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African
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ClippingRankSum
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DP
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FS
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ReadPosRankSum
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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East Asian
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DP
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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MQ
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MQRankSum
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QD
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