20-47752393-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752393
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752393
    reference: chr 20
allele count: 2
allele frequency: 1.661792076575379e-5
allele num: 120352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.343C>T
  hgvsp: ENSP00000416779.1:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.343C>T
  hgvsp: ENSP00000360893.3:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.586C>T
  hgvsp: ENSP00000360922.2:p.Arg196Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.343C>T
  hgvsp: ENSP00000360867.1:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.343C>T
  hgvsp: ENSP00000323443.7:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.343C>T
  hgvsp: ENSP00000360857.1:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.343C>T
  hgvsp: ENSP00000353604.4:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.343C>T
  hgvsp: ENSP00000345425.6:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg196Trp
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

20-47752407-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752407
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752407
    reference: chr 20
allele count: 1
allele frequency: 8.308408109006315e-6
allele num: 120360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.329A>C
  hgvsp: ENSP00000416779.1:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.329A>C
  hgvsp: ENSP00000360893.3:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.572A>C
  hgvsp: ENSP00000360922.2:p.Glu191Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.329A>C
  hgvsp: ENSP00000323443.7:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.329A>C
  hgvsp: ENSP00000360857.1:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.329A>C
  hgvsp: ENSP00000360867.1:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.329A>C
  hgvsp: ENSP00000345425.6:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.329A>C
  hgvsp: ENSP00000353604.4:p.Glu110Ala
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49544
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu191Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD

20-47752414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752414
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752414
    reference: chr 20
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.322G>A
  hgvsp: ENSP00000360857.1:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.322G>A
  hgvsp: ENSP00000360893.3:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.322G>A
  hgvsp: ENSP00000416779.1:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.565G>A
  hgvsp: ENSP00000360922.2:p.Val189Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.322G>A
  hgvsp: ENSP00000323443.7:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.322G>A
  hgvsp: ENSP00000353604.4:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.322G>A
  hgvsp: ENSP00000345425.6:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.322G>A
  hgvsp: ENSP00000360867.1:p.Val108Met
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16103
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val189Met
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

20-47752420-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752420
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752420
    reference: chr 20
allele count: 1
allele frequency: 8.33541718763024e-6
allele num: 119970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.316A>G
  hgvsp: ENSP00000353604.4:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.316A>G
  hgvsp: ENSP00000323443.7:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.316A>G
  hgvsp: ENSP00000416779.1:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.316A>G
  hgvsp: ENSP00000360857.1:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.316A>G
  hgvsp: ENSP00000360867.1:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.559A>G
  hgvsp: ENSP00000360922.2:p.Ser187Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.316A>G
  hgvsp: ENSP00000360893.3:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.316A>G
  hgvsp: ENSP00000345425.6:p.Ser106Gly
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4212
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser187Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

20-47752424-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752424
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752424
    reference: chr 20
allele count: 1
allele frequency: 8.347663488989432e-6
allele num: 119794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.312A>G
  hgvsp: ENST00000360426.4:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.312A>G
  hgvsp: ENST00000437404.2:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.312A>G
  hgvsp: ENST00000340954.7:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.312A>G
  hgvsp: ENST00000371792.1:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.555A>G
  hgvsp: ENST00000371856.2:c.555A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.312A>G
  hgvsp: ENST00000371828.3:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.312A>G
  hgvsp: ENST00000371802.1:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.312A>G
  hgvsp: ENST00000347458.5:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu185Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

20-47752434-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752434
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752434
    reference: chr 20
allele count: 3
allele frequency: 2.516398530423258e-5
allele num: 119218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.302A>G
  hgvsp: ENSP00000360857.1:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.302A>G
  hgvsp: ENSP00000360893.3:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.302A>G
  hgvsp: ENSP00000345425.6:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.302A>G
  hgvsp: ENSP00000416779.1:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.302A>G
  hgvsp: ENSP00000323443.7:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.302A>G
  hgvsp: ENSP00000360867.1:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.545A>G
  hgvsp: ENSP00000360922.2:p.Asn182Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.302A>G
  hgvsp: ENSP00000353604.4:p.Asn101Ser
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn182Ser
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

20-47752434-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752434
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752434
    reference: chr 20
allele count: 1
allele frequency: 8.38799510141086e-6
allele num: 119218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.302A>C
  hgvsp: ENSP00000360857.1:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.302A>C
  hgvsp: ENSP00000323443.7:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.545A>C
  hgvsp: ENSP00000360922.2:p.Asn182Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.302A>C
  hgvsp: ENSP00000360867.1:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.302A>C
  hgvsp: ENSP00000416779.1:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.302A>C
  hgvsp: ENSP00000360893.3:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.302A>C
  hgvsp: ENSP00000345425.6:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.302A>C
  hgvsp: ENSP00000353604.4:p.Asn101Thr
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn182Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

20-47752435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752435
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752435
    reference: chr 20
allele count: 1
allele frequency: 8.404491360182881e-6
allele num: 118984
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.301A>G
  hgvsp: ENSP00000353604.4:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.301A>G
  hgvsp: ENSP00000360893.3:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.301A>G
  hgvsp: ENSP00000360867.1:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.301A>G
  hgvsp: ENSP00000360857.1:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.301A>G
  hgvsp: ENSP00000416779.1:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.301A>G
  hgvsp: ENSP00000345425.6:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.544A>G
  hgvsp: ENSP00000360922.2:p.Asn182Asp
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.301A>G
  hgvsp: ENSP00000323443.7:p.Asn101Asp
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn182Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

20-47752435-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752435
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752435
    reference: chr 20
allele count: 1
allele frequency: 8.404491360182881e-6
allele num: 118984
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.301A>C
  hgvsp: ENSP00000416779.1:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.301A>C
  hgvsp: ENSP00000345425.6:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.301A>C
  hgvsp: ENSP00000360893.3:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.301A>C
  hgvsp: ENSP00000323443.7:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.301A>C
  hgvsp: ENSP00000360857.1:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.544A>C
  hgvsp: ENSP00000360922.2:p.Asn182His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.301A>C
  hgvsp: ENSP00000360867.1:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.301A>C
  hgvsp: ENSP00000353604.4:p.Asn101His
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn182His
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

20-47752436-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752436
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752436
    reference: chr 20
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.300C>A
  hgvsp: ENST00000340954.7:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.300C>A
  hgvsp: ENST00000371828.3:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.300C>A
  hgvsp: ENST00000437404.2:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.300C>A
  hgvsp: ENST00000371802.1:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.300C>A
  hgvsp: ENST00000347458.5:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.300C>A
  hgvsp: ENST00000360426.4:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.300C>A
  hgvsp: ENST00000371792.1:c.300C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.543C>A
  hgvsp: ENST00000371856.2:c.543C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu181Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/20-47752468-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752468
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752468
    reference: chr 20
allele count: 1
allele frequency: 9.038159107752934e-6
allele num: 110642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.268G>T
  hgvsp: ENSP00000360893.3:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.268G>T
  hgvsp: ENSP00000353604.4:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.511G>T
  hgvsp: ENSP00000360922.2:p.Val171Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.268G>T
  hgvsp: ENSP00000323443.7:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.268G>T
  hgvsp: ENSP00000360857.1:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.268G>T
  hgvsp: ENSP00000416779.1:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.268G>T
  hgvsp: ENSP00000345425.6:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.268G>T
  hgvsp: ENSP00000360867.1:p.Val90Leu
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14616
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val171Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

20-47752477-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752477
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752477
    reference: chr 20
allele count: 1
allele frequency: 9.383327703336711e-6
allele num: 106572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.511-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.268-9T>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13033
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14933
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28655
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2518
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

20-47752481-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752481
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752481
    reference: chr 20
allele count: 1
allele frequency: 9.490187146490529e-6
allele num: 105372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.511-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.268-13A>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26100
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

20-47752484-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752484
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752484
    reference: chr 20
allele count: 1
allele frequency: 9.605040725372675e-6
allele num: 104112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.511-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.268-16A>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11607
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3764
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

20-47752493-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752493
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752493
    reference: chr 20
allele count: 1
allele frequency: 1.002827974889188e-5
allele num: 99718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.511-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.268-25A>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3352
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

20-47752508-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47752508
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47752508
    reference: chr 20
allele count: 1
allele frequency: 1.072156105929023e-5
allele num: 93270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.268-40A>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.511-40A>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5649
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5696
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

20-47768069-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768069
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768069
    reference: chr 20
allele count: 117
allele frequency: 1.018400849537803e-3
allele num: 114886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+50A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+50A>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 11223
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28128
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 9.75e1
  variant carriers: 116
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

20-47768081-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768081
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768081
    reference: chr 20
allele count: 1
allele frequency: 8.675434639275428e-6
allele num: 115268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+38G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+38G>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP

20-47768085-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768085
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768085
    reference: chr 20
allele count: 4
allele frequency: 3.466985629344567e-5
allele num: 115374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+34G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+34G>A
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28639
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40891
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

20-47768086-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768086
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768086
    reference: chr 20
allele count: 6
allele frequency: 5.191209551825575e-5
allele num: 115580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+33C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+33C>T
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28675
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum

20-47768090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768090
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768090
    reference: chr 20
allele count: 6
allele frequency: 5.187529179851637e-5
allele num: 115662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+29G>A
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28743
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

20-47768091-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768091
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768091
    reference: chr 20
allele count: 4
allele frequency: 3.45059609047463e-5
allele num: 115922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+28C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+28C>T
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

20-47768094-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768094
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768094
    reference: chr 20
allele count: 2
allele frequency: 1.723157513828339e-5
allele num: 116066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+25T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+25T>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum

20-47768103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768103
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768103
    reference: chr 20
allele count: 1
allele frequency: 8.556808652644909e-6
allele num: 116866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+16C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+16C>T
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2258
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

20-47768110-ACTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768110
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768107
    reference: chr 20
allele count: 1
allele frequency: 8.502533755059007e-6
allele num: 117612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+6_510+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+6_267+8delGAG
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7084
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 7.75e1
  variant carriers: 0
hgvs: c.510+6_510+8delGAG
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: ACTC
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff

20-47768114-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768114
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768114
    reference: chr 20
allele count: 1
allele frequency: 8.476300264460568e-6
allele num: 117976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.510+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.267+5G>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
hgvs: c.510+5G>C
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

20-47768135-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768135
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768135
    reference: chr 20
allele count: 477
allele frequency: 3.97003745318352e-3
allele num: 120150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.251T>C
  hgvsp: ENSP00000360893.3:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.371T>C
  hgvsp: ENSP00000398785.2:p.Leu124Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.494T>C
  hgvsp: ENSP00000360922.2:p.Leu165Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.251T>C
  hgvsp: ENSP00000323443.7:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.251T>C
  hgvsp: ENSP00000353604.4:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.251T>C
  hgvsp: ENSP00000360867.1:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.251T>C
  hgvsp: ENSP00000360857.1:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.251T>C
  hgvsp: ENSP00000345425.6:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.251T>C
  hgvsp: ENSP00000416779.1:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15258
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9404
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 241
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 29811
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu165Pro
num of homozygotes: 8
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

20-47768139-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768139
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768139
    reference: chr 20
allele count: 3
allele frequency: 2.491859924247458e-5
allele num: 120392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.247C>T
  hgvsp: ENSP00000345425.6:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.247C>T
  hgvsp: ENSP00000360857.1:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.247C>T
  hgvsp: ENSP00000360867.1:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.247C>T
  hgvsp: ENSP00000360893.3:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.247C>T
  hgvsp: ENSP00000416779.1:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.247C>T
  hgvsp: ENSP00000323443.7:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.367C>T
  hgvsp: ENSP00000398785.2:p.Pro123Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.490C>T
  hgvsp: ENSP00000360922.2:p.Pro164Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.247C>T
  hgvsp: ENSP00000353604.4:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15459
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3076
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro164Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

20-47768161-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768161
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768161
    reference: chr 20
allele count: 49
allele frequency: 4.044172265231673e-4
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.468G>A
  hgvsp: ENST00000371856.2:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.225G>A
  hgvsp: ENST00000340954.7:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.225G>A
  hgvsp: ENST00000371802.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.225G>A
  hgvsp: ENST00000371828.3:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.225G>A
  hgvsp: ENST00000360426.4:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.345G>A
  hgvsp: ENST00000456866.2:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.225G>A
  hgvsp: ENST00000437404.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.225G>A
  hgvsp: ENST00000347458.5:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.225G>A
  hgvsp: ENST00000371792.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30531
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala156Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

20-47768162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768162
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768162
    reference: chr 20
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.344C>T
  hgvsp: ENSP00000398785.2:p.Ala115Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.224C>T
  hgvsp: ENSP00000360857.1:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.224C>T
  hgvsp: ENSP00000360893.3:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.224C>T
  hgvsp: ENSP00000323443.7:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.224C>T
  hgvsp: ENSP00000345425.6:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.224C>T
  hgvsp: ENSP00000416779.1:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.224C>T
  hgvsp: ENSP00000353604.4:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.224C>T
  hgvsp: ENSP00000360867.1:p.Ala75Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.467C>T
  hgvsp: ENSP00000360922.2:p.Ala156Val
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala156Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

20-47768164-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768164
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768164
    reference: chr 20
allele count: 175
allele frequency: 1.443441825170326e-3
allele num: 121238
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.465A>G
  hgvsp: ENST00000371856.2:c.465A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.342A>G
  hgvsp: ENST00000456866.2:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.222A>G
  hgvsp: ENST00000437404.2:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.222A>G
  hgvsp: ENST00000360426.4:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.222A>G
  hgvsp: ENST00000371802.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.222A>G
  hgvsp: ENST00000347458.5:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.222A>G
  hgvsp: ENST00000371828.3:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.222A>G
  hgvsp: ENST00000371792.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.222A>G
  hgvsp: ENST00000340954.7:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 30564
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys155Lys
num of homozygotes: 1
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

20-47768165-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768165
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768165
    reference: chr 20
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.221A>G
  hgvsp: ENSP00000345425.6:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.341A>G
  hgvsp: ENSP00000398785.2:p.Lys114Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.221A>G
  hgvsp: ENSP00000323443.7:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.221A>G
  hgvsp: ENSP00000416779.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.221A>G
  hgvsp: ENSP00000360867.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.221A>G
  hgvsp: ENSP00000360857.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.464A>G
  hgvsp: ENSP00000360922.2:p.Lys155Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.221A>G
  hgvsp: ENSP00000353604.4:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.221A>G
  hgvsp: ENSP00000360893.3:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys155Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

20-47768179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768179
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768179
    reference: chr 20
allele count: 3
allele frequency: 2.472024918011174e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.207C>T
  hgvsp: ENST00000437404.2:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.207C>T
  hgvsp: ENST00000360426.4:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.327C>T
  hgvsp: ENST00000456866.2:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.207C>T
  hgvsp: ENST00000347458.5:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.207C>T
  hgvsp: ENST00000340954.7:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.207C>T
  hgvsp: ENST00000371802.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.207C>T
  hgvsp: ENST00000371828.3:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.450C>T
  hgvsp: ENST00000371856.2:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.207C>T
  hgvsp: ENST00000371792.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46269
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His150His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-47768185-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768185
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768185
    reference: chr 20
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.201G>A
  hgvsp: ENST00000360426.4:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.201G>A
  hgvsp: ENST00000437404.2:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.201G>A
  hgvsp: ENST00000371802.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.201G>A
  hgvsp: ENST00000371792.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.201G>A
  hgvsp: ENST00000371828.3:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.321G>A
  hgvsp: ENST00000456866.2:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.201G>A
  hgvsp: ENST00000340954.7:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.444G>A
  hgvsp: ENST00000371856.2:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.201G>A
  hgvsp: ENST00000347458.5:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala148Ala
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

20-47768186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768186
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768186
    reference: chr 20
allele count: 7
allele frequency: 5.767012687427912e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.200C>T
  hgvsp: ENSP00000323443.7:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.200C>T
  hgvsp: ENSP00000345425.6:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.200C>T
  hgvsp: ENSP00000416779.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.200C>T
  hgvsp: ENSP00000360857.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.320C>T
  hgvsp: ENSP00000398785.2:p.Ala107Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.200C>T
  hgvsp: ENSP00000360867.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.200C>T
  hgvsp: ENSP00000360893.3:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.443C>T
  hgvsp: ENSP00000360922.2:p.Ala148Val
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.200C>T
  hgvsp: ENSP00000353604.4:p.Ala67Val
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala148Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

20-47768188-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768188
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768188
    reference: chr 20
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.198T>C
  hgvsp: ENST00000371802.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.198T>C
  hgvsp: ENST00000371792.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.198T>C
  hgvsp: ENST00000360426.4:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.198T>C
  hgvsp: ENST00000437404.2:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.198T>C
  hgvsp: ENST00000371828.3:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.318T>C
  hgvsp: ENST00000456866.2:c.318T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.198T>C
  hgvsp: ENST00000347458.5:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.198T>C
  hgvsp: ENST00000340954.7:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.441T>C
  hgvsp: ENST00000371856.2:c.441T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7500
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala147Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

20-47768201-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768201
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768201
    reference: chr 20
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.185A>G
  hgvsp: ENSP00000360893.3:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.185A>G
  hgvsp: ENSP00000360867.1:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.185A>G
  hgvsp: ENSP00000353604.4:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.185A>G
  hgvsp: ENSP00000360857.1:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.185A>G
  hgvsp: ENSP00000416779.1:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.305A>G
  hgvsp: ENSP00000398785.2:p.Lys102Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.428A>G
  hgvsp: ENSP00000360922.2:p.Lys143Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.185A>G
  hgvsp: ENSP00000345425.6:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.185A>G
  hgvsp: ENSP00000323443.7:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys143Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

20-47768206-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768206
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768206
    reference: chr 20
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.180A>G
  hgvsp: ENST00000371792.1:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.180A>G
  hgvsp: ENST00000360426.4:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.180A>G
  hgvsp: ENST00000347458.5:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.180A>G
  hgvsp: ENST00000371828.3:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.300A>G
  hgvsp: ENST00000456866.2:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.180A>G
  hgvsp: ENST00000437404.2:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.423A>G
  hgvsp: ENST00000371856.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.180A>G
  hgvsp: ENST00000340954.7:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.180A>G
  hgvsp: ENST00000371802.1:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7506
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys141Lys
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

20-47768216-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768216
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768216
    reference: chr 20
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.170T>C
  hgvsp: ENSP00000323443.7:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.170T>C
  hgvsp: ENSP00000353604.4:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.170T>C
  hgvsp: ENSP00000360893.3:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.170T>C
  hgvsp: ENSP00000360867.1:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.290T>C
  hgvsp: ENSP00000398785.2:p.Phe97Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.413T>C
  hgvsp: ENSP00000360922.2:p.Phe138Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.170T>C
  hgvsp: ENSP00000360857.1:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.170T>C
  hgvsp: ENSP00000345425.6:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.170T>C
  hgvsp: ENSP00000416779.1:p.Phe57Ser
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe138Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS

20-47768224-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768224
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768224
    reference: chr 20
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.162A>G
  hgvsp: ENST00000371792.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.162A>G
  hgvsp: ENST00000371828.3:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.162A>G
  hgvsp: ENST00000437404.2:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.162A>G
  hgvsp: ENST00000340954.7:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.162A>G
  hgvsp: ENST00000360426.4:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.405A>G
  hgvsp: ENST00000371856.2:c.405A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.282A>G
  hgvsp: ENST00000456866.2:c.282A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.162A>G
  hgvsp: ENST00000371802.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.162A>G
  hgvsp: ENST00000347458.5:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly135Gly
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-47768239-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768239
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768239
    reference: chr 20
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.147A>G
  hgvsp: ENST00000347458.5:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.147A>G
  hgvsp: ENST00000371792.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.390A>G
  hgvsp: ENST00000371856.2:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.147A>G
  hgvsp: ENST00000371828.3:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.147A>G
  hgvsp: ENST00000371802.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.267A>G
  hgvsp: ENST00000456866.2:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.147A>G
  hgvsp: ENST00000340954.7:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.147A>G
  hgvsp: ENST00000360426.4:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.147A>G
  hgvsp: ENST00000437404.2:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46251
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu130Glu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

20-47768266-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768266
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768266
    reference: chr 20
allele count: 1
allele frequency: 8.364980844193866e-6
allele num: 119546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.120A>G
  hgvsp: ENST00000371792.1:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.120A>G
  hgvsp: ENST00000347458.5:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.120A>G
  hgvsp: ENST00000371828.3:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.120A>G
  hgvsp: ENST00000360426.4:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.120A>G
  hgvsp: ENST00000437404.2:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.120A>G
  hgvsp: ENST00000340954.7:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.120A>G
  hgvsp: ENST00000371802.1:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.363A>G
  hgvsp: ENST00000371856.2:c.363A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.240A>G
  hgvsp: ENST00000456866.2:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro121Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

20-47768266-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768266
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768266
    reference: chr 20
allele count: 1
allele frequency: 8.364980844193866e-6
allele num: 119546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.240A>C
  hgvsp: ENST00000456866.2:c.240A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.120A>C
  hgvsp: ENST00000437404.2:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.120A>C
  hgvsp: ENST00000360426.4:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.120A>C
  hgvsp: ENST00000371802.1:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.363A>C
  hgvsp: ENST00000371856.2:c.363A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.120A>C
  hgvsp: ENST00000371792.1:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.120A>C
  hgvsp: ENST00000347458.5:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.120A>C
  hgvsp: ENST00000371828.3:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.120A>C
  hgvsp: ENST00000340954.7:c.120A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro121Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

20-47768267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768267
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768267
    reference: chr 20
allele count: 1
allele frequency: 8.367220576668843e-6
allele num: 119514
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.239C>T
  hgvsp: ENSP00000398785.2:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.119C>T
  hgvsp: ENSP00000416779.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.119C>T
  hgvsp: ENSP00000345425.6:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.362C>T
  hgvsp: ENSP00000360922.2:p.Pro121Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.119C>T
  hgvsp: ENSP00000360893.3:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.119C>T
  hgvsp: ENSP00000323443.7:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.119C>T
  hgvsp: ENSP00000360867.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.119C>T
  hgvsp: ENSP00000353604.4:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.119C>T
  hgvsp: ENSP00000360857.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7182
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro121Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

20-47768268-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768268
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768268
    reference: chr 20
allele count: 1
allele frequency: 8.381246123673667e-6
allele num: 119314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.118C>G
  hgvsp: ENSP00000416779.1:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.118C>G
  hgvsp: ENSP00000360893.3:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.238C>G
  hgvsp: ENSP00000398785.2:p.Pro80Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.118C>G
  hgvsp: ENSP00000360867.1:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.118C>G
  hgvsp: ENSP00000323443.7:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.118C>G
  hgvsp: ENSP00000360857.1:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.118C>G
  hgvsp: ENSP00000345425.6:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.118C>G
  hgvsp: ENSP00000353604.4:p.Pro40Ala
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.361C>G
  hgvsp: ENSP00000360922.2:p.Pro121Ala
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro121Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

20-47768276-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768276
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768275
    reference: chr 20
allele count: 1
allele frequency: 8.596087061169755e-6
allele num: 116332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.109delT
  hgvsp: ENSP00000353604.4:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.109delT
  hgvsp: ENSP00000323443.7:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.352delT
  hgvsp: ENSP00000360922.2:p.Tyr118ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.109delT
  hgvsp: ENSP00000360867.1:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.109delT
  hgvsp: ENSP00000345425.6:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.109delT
  hgvsp: ENSP00000416779.1:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.229delT
  hgvsp: ENSP00000398785.2:p.Tyr77ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.109delT
  hgvsp: ENSP00000360893.3:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.109delT
  hgvsp: ENSP00000360857.1:p.Tyr37ThrfsTer40
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr118ThrfsTer40
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: TA
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

20-47768278-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768278
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768278
    reference: chr 20
allele count: 4
allele frequency: 3.43878954607978e-5
allele num: 116320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.108T>C
  hgvsp: ENST00000437404.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.108T>C
  hgvsp: ENST00000347458.5:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.351T>C
  hgvsp: ENST00000371856.2:c.351T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.108T>C
  hgvsp: ENST00000371828.3:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.108T>C
  hgvsp: ENST00000340954.7:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.228T>C
  hgvsp: ENST00000456866.2:c.228T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.108T>C
  hgvsp: ENST00000371792.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.108T>C
  hgvsp: ENST00000360426.4:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.108T>C
  hgvsp: ENST00000371802.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27737
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14374
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe117Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

20-47768282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768282
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768282
    reference: chr 20
allele count: 1
allele frequency: 8.781018949438892e-6
allele num: 113882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.104A>G
  hgvsp: ENSP00000416779.1:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.104A>G
  hgvsp: ENSP00000353604.4:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.104A>G
  hgvsp: ENSP00000323443.7:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.104A>G
  hgvsp: ENSP00000360867.1:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.104A>G
  hgvsp: ENSP00000360893.3:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.104A>G
  hgvsp: ENSP00000360857.1:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.104A>G
  hgvsp: ENSP00000345425.6:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.347A>G
  hgvsp: ENSP00000360922.2:p.Tyr116Cys
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.224A>G
  hgvsp: ENSP00000398785.2:p.Tyr75Cys
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr116Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

20-47768284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768284
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768284
    reference: chr 20
allele count: 2
allele frequency: 1.756728269271309e-5
allele num: 113848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102G>A
  hgvsp: ENST00000371828.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102G>A
  hgvsp: ENST00000340954.7:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102G>A
  hgvsp: ENST00000347458.5:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222G>A
  hgvsp: ENST00000456866.2:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102G>A
  hgvsp: ENST00000360426.4:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102G>A
  hgvsp: ENST00000371792.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102G>A
  hgvsp: ENST00000371802.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102G>A
  hgvsp: ENST00000437404.2:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345G>A
  hgvsp: ENST00000371856.2:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25388
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
hgvs: c.345G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

20-47768288-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768288
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768288
    reference: chr 20
allele count: 1
allele frequency: 8.995556195239551e-6
allele num: 111166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-4C>A
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 8.25e1
  variant carriers: 0
hgvs: c.345-4C>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

20-47768291-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768291
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768291
    reference: chr 20
allele count: 1
allele frequency: 9.035872413481521e-6
allele num: 110670
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-7T>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
hgvs: c.345-7T>C
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

20-47768294-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768294
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768294
    reference: chr 20
allele count: 1
allele frequency: 9.177174531505241e-6
allele num: 108966
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-10T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-10T>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13435
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

20-47768301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768301
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768301
    reference: chr 20
allele count: 1
allele frequency: 9.383327703336711e-6
allele num: 106572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-17C>T
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16234
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3810
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

20-47768302-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768302
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768302
    reference: chr 20
allele count: 1
allele frequency: 9.470952588411342e-6
allele num: 105586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-18A>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-18A>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21453
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3911
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

20-47768305-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768305
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768305
    reference: chr 20
allele count: 1
allele frequency: 9.508414947228297e-6
allele num: 105170
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-21C>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

20-47768306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768306
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768306
    reference: chr 20
allele count: 1
allele frequency: 9.56699768478656e-6
allele num: 104526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-22C>T
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

20-47768327-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47768327
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47768327
    reference: chr 20
allele count: 1
allele frequency: 1.038874690934779e-5
allele num: 96258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.222-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.345-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.102-43T>C
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8664
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

20-47770424-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770424
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770424
    reference: chr 20
allele count: 1
allele frequency: 1.030099507612435e-5
allele num: 97078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+46G>A
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13089
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

20-47770425-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770425
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770426
    reference: chr 20
allele count: 2
allele frequency: 2.055836519879939e-5
allele num: 97284
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+44dupA
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+44dupA
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16416
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12548
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5399
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-47770425-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770425
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770425
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 97284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+45C>A
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+45C>A
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9656
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

20-47770435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770435
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770435
    reference: chr 20
allele count: 7
allele frequency: 7.119899100858457e-5
allele num: 98316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+35C>T
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+35C>T
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10036
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11778
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16085
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/20-47770437-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770437
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770437
    reference: chr 20
allele count: 1
allele frequency: 1.01665277241211e-5
allele num: 98362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+33T>G
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5931
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7331
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

20-47770441-TACA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770441
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770438
    reference: chr 20
allele count: 1
allele frequency: 1.036183528826626e-5
allele num: 96508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+26_221+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+26_344+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+26_101+28delTGT
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5220
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: TACA
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

20-47770441-TACAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770441
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770437
    reference: chr 20
allele count: 1
allele frequency: 1.036183528826626e-5
allele num: 96508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+25_344+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+25_221+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+25_101+28delTTGT
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7044
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: TACAA
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/20-47770443-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770444
    reference: chr 20
allele count: 898
allele frequency: 2.269510715729883e-2
allele num: 39568
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+26dupT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+26dupT
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14073
  bin: 1.25e1
  variant carriers: 636
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 7.5e0
  variant carriers: 995
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.5e0
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 1.75e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 279
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 2.25e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 6.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 216
genotype quality: GenotypeQuality
  all individuals: 8255
  bin: 9.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 30180
  bin: 2.5e0
  variant carriers: 251
num of homozygotes: 3
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/20-47770443-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770445
    reference: chr 20
allele count: 502
allele frequency: 1.26870198139911e-2
allele num: 39568
alternate allele: CAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+25_344+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+25_101+26dupTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+25_221+26dupTT
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.5e0
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 7.5e0
  variant carriers: 535
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 1.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 14073
  bin: 1.25e1
  variant carriers: 373
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 1.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 5.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 5.25e1
  variant carriers: 61
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/20-47770443-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770442
    reference: chr 20
allele count: 5566
allele frequency: 1.406692276587141e-1
allele num: 39568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+26delT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+26delT
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 7.5e0
  variant carriers: 1547
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 444
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14073
  bin: 1.25e1
  variant carriers: 2751
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 1.75e1
  variant carriers: 1978
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.5e0
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 959
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 30180
  bin: 2.5e0
  variant carriers: 660
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 6.25e1
  variant carriers: 316
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.25e1
  variant carriers: 243
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 422
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 377
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 5.25e1
  variant carriers: 396
num of homozygotes: 9
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: CA
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/20-47770443-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770441
    reference: chr 20
allele count: 2510
allele frequency: 6.343509906995552e-2
allele num: 39568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360857
  ensembl transcript: ENST00000371792
  gene symbol: STAU1
  hgvsc: ENST00000371792.1:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360893
  ensembl transcript: ENST00000371828
  gene symbol: STAU1
  hgvsc: ENST00000371828.3:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360922
  ensembl transcript: ENST00000371856
  gene symbol: STAU1
  hgvsc: ENST00000371856.2:c.344+25_344+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000360867
  ensembl transcript: ENST00000371802
  gene symbol: STAU1
  hgvsc: ENST00000371802.1:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000416779
  ensembl transcript: ENST00000437404
  gene symbol: STAU1
  hgvsc: ENST00000437404.2:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000398785
  ensembl transcript: ENST00000456866
  gene symbol: STAU1
  hgvsc: ENST00000456866.2:c.221+25_221+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000353604
  ensembl transcript: ENST00000360426
  gene symbol: STAU1
  hgvsc: ENST00000360426.4:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000345425
  ensembl transcript: ENST00000340954
  gene symbol: STAU1
  hgvsc: ENST00000340954.7:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124214
  ensembl protein: ENSP00000323443
  ensembl transcript: ENST00000347458
  gene symbol: STAU1
  hgvsc: ENST00000347458.5:c.101+25_101+26delTT
  variant of: http://identifiers.org/hgnc/11370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 1.75e1
  variant carriers: 894
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 7.5e0
  variant carriers: 525
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14073
  bin: 1.25e1
  variant carriers: 1117
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 189
genotype quality: GenotypeQuality
  all individuals: 30180
  bin: 2.5e0
  variant carriers: 224
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 8255
  bin: 9.75e1
  variant carriers: 643
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 176
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 3.75e1
  variant carriers: 177
num of homozygotes: 7
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: CAA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/20-47770443-CAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770440
    reference: chr 20
allele count: 9673
allele frequency: 2.444652244237768e-1
allele num: 39568
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 1917
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 964
genotype depth: GenotypeDepth
  all individuals: 14073
  bin: 1.25e1
  variant carriers: 3666
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.5e0
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 1.75e1
  variant carriers: 3395
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 7.5e0
  variant carriers: 1434
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 5.75e1
  variant carriers: 384
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 6.25e1
  variant carriers: 345
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 535
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 2.25e1
  variant carriers: 511
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 382
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 5.25e1
  variant carriers: 425
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 9.25e1
  variant carriers: 224
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 7.75e1
  variant carriers: 280
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 1.25e1
  variant carriers: 552
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 529
genotype quality: GenotypeQuality
  all individuals: 30180
  bin: 2.5e0
  variant carriers: 579
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 3.25e1
  variant carriers: 444
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 6.75e1
  variant carriers: 306
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 442
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 8.25e1
  variant carriers: 253
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.25e1
  variant carriers: 288
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 3.75e1
  variant carriers: 504
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 529
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 8.75e1
  variant carriers: 273
genotype quality: GenotypeQuality
  all individuals: 8255
  bin: 9.75e1
  variant carriers: 4991
num of homozygotes: 86
population: Other
  type: Population
  allele count: 67
  allele frequency: 2.294520547945205e-1
  allele num: 292
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 274
  allele frequency: 1.307251908396947e-1
  allele num: 2096
  num of homozygotes: 1
population: Latino
  type: Population
  allele count: 754
  allele frequency: 2.211143695014663e-1
  allele num: 3410
  num of homozygotes: 6
population: African
  type: Population
  allele count: 1670
  allele frequency: 3.627280625543006e-1
  allele num: 4604
  num of homozygotes: 17
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CAAA
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/20-47770443-CAAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 47770439
    reference: chr 20
allele count: 1921
allele frequency: 4.854933279417711e-2
allele num: 39568
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 7.5e0
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 14073
  bin: 1.25e1
  variant carriers: 658
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 1.75e1
  variant carriers: 724
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 467
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 1.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 7.75e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 6.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 8.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 2.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 3.75e1
  variant carriers: 91
genotype quality: GenotypeQuality
  all individuals: 30180
  bin: 2.5e0
  variant carriers: 114
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 3.25e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 6.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 8255
  bin: 9.75e1
  variant carriers: 1017
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 8.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 5.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 5.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 9.25e1
  variant carriers: 43
num of homozygotes: 1
population: Other
  type: Population
  allele count: 13
  allele frequency: 4.452054794520548e-2
  allele num: 292
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1119
  allele frequency: 4.921710063335679e-2
  allele num: 22736
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 42
  allele frequency: 2.00381679389313e-2
  allele num: 2096
  num of homozygotes: 0
population: African
  type: Population
  allele count: 427
  allele frequency: 9.274543874891399e-2
  allele num: 4604
  num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: Latino
reference allele: CAAAA
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/20-47770455-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47770455
    reference: chr 20
allele count: 1
allele frequency: 9.336370765955857e-6
allele num: 107108
alternate allele: C
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.646337e6

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.101e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 8.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.356e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: -3.106e-1

DP
type: SiteQuality
SIO_000300: 1.647339e6

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 1.662e0

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeQuality
all individuals: 4220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513592056668887e-5
allele num: 66068
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.865e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.64637e6

FS
type: SiteQuality
SIO_000300: 3.471e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.705e1

VQSLOD
type: SiteQuality
SIO_000300: -5.436e-1

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518187890933382e-5
allele num: 65868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.224e0

DP
type: SiteQuality
SIO_000300: 1.643358e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: -8.023e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.383e0

FS
type: SiteQuality
SIO_000300: 1.658e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.644e1

GenotypeQuality
all individuals: 4208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520912547528517e-5
allele num: 65750
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.38e0

FS
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.431e1

DP
type: SiteQuality
SIO_000300: 1.640823e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.492433061699651e-4
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65332
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.35e-1

QD
type: SiteQuality
SIO_000300: 1.05e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

FS
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.633505e6

MQRankSum
type: SiteQuality
SIO_000300: -4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.195786864931847e-5
allele num: 16140
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
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East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.633505e6

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
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Latino
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Other
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allele frequency: 0.0e0
allele num: 888
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European (Non-Finnish)
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allele frequency: 1.534495457893445e-5
allele num: 65168
num of homozygotes: 0

South Asian
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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QD
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.207324643078833e-5
allele num: 16110
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

DP
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.534636751480924e-5
allele num: 65162
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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FS
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MQRankSum
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QD
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.017087062652563e-4
allele num: 9832
num of homozygotes: 0

FS
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.749597592553713e-5
allele num: 57156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
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MQ
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QD
type: SiteQuality
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VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 1.054185114906177e-4
allele num: 9486
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56428
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 820
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 1.795783500341199e-5
allele num: 55686
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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South Asian
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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Latino
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African
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South Asian
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DP
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InbreedingCoeff
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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BaseQRankSum
type: SiteQuality
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VQSLOD
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QD
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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Latino
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European (Finnish)
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allele count: 5
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allele num: 6596
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Other
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East Asian
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MQRankSum
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FS
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QD
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.661975e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 612
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6939
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533413070813016e-5
allele num: 65214
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.268e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.623e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

QD
type: SiteQuality
SIO_000300: 1.199e1

MQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

DP
type: SiteQuality
SIO_000300: 1.67024e6

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3352
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65236
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.445785097016142e-4
allele num: 12266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

DP
type: SiteQuality
SIO_000300: 1.673656e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.358e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.494e0

QD
type: SiteQuality
SIO_000300: 1.221e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 493
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variant carriers: 0

GenotypeQuality
all individuals: 6957
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.699321047526673e-5
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.126512482769183e-5
allele num: 65290
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.123e-1

DP
type: SiteQuality
SIO_000300: 1.675237e6

QD
type: SiteQuality
SIO_000300: 1.216e1

FS
type: SiteQuality
SIO_000300: 1.2328e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.42e0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 593
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.478260869565218e-4
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.062505742198267e-5
allele num: 65306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12470
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.678684e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.275e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

QD
type: SiteQuality
SIO_000300: 1.318e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.525e0

GenotypeQuality
all individuals: 411
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 3345
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.589261128958238e-5
allele num: 65370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.314e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 2.389e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.21e-1

DP
type: SiteQuality
SIO_000300: 1.680682e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1297
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GenotypeQuality
all individuals: 41751
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058852318610058e-5
allele num: 65384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.226e1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.387e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

FS
type: SiteQuality
SIO_000300: 1.045e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.683923e6

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.494004796163069e-5
allele num: 13344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.692472e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

QD
type: SiteQuality
SIO_000300: 1.808e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.253e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31
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GenotypeQuality
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GenotypeQuality
all individuals: 29
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 42765
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GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521329033043267e-5
allele num: 65732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.728e1

DP
type: SiteQuality
SIO_000300: 1.700356e6

MQRankSum
type: SiteQuality
SIO_000300: -1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

QD
type: SiteQuality
SIO_000300: 1.979e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1796
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GenotypeQuality
all individuals: 1318
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.704932e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.34e-1

FS
type: SiteQuality
SIO_000300: 1.308e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.223e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.758e0

VQSLOD
type: SiteQuality
SIO_000300: -2.052e0

QD
type: SiteQuality
SIO_000300: 8.359999999999999e0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7279
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.75e1
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GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 1335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
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GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.75e1
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GenotypeQuality
all individuals: 594
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3476
bin: 9.75e1
variant carriers: 469

Latino
type: Population
allele count: 26
allele frequency: 2.249134948096886e-3
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.580357142857143e-3
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15680
num of homozygotes: 0

African
type: Population
allele count: 440
allele frequency: 4.23158299673014e-2
allele num: 10398
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.043226623259179e-5
allele num: 66348
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.54e-2

DP
type: SiteQuality
SIO_000300: 1.757293e6

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.825e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.175e1

GenotypeQuality
all individuals: 45078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7378
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variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
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GenotypeQuality
all individuals: 108
bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.314725940894166e-5
allele num: 15836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010959894014212e-5
allele num: 66424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.748e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.11e1

DP
type: SiteQuality
SIO_000300: 1.727535e6

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
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GenotypeQuality
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variant carriers: 49

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 48
allele frequency: 2.928615009151922e-3
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.004e0

DP
type: SiteQuality
SIO_000300: 1.74127e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

FS
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

QD
type: SiteQuality
SIO_000300: 1.21e1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7481
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
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variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45978
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
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variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.235e-1

DP
type: SiteQuality
SIO_000300: 1.73998e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.855e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

QD
type: SiteQuality
SIO_000300: 7.6e0

GenotypeQuality
all individuals: 290
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 98
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GenotypeQuality
all individuals: 596
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variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
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variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 9.75e1
variant carriers: 174

GenotypeQuality
all individuals: 7465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46023
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 1.965527668581796e-3
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.765904285988853e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 156
allele frequency: 2.340725624943733e-3
allele num: 66646
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.79e0

DP
type: SiteQuality
SIO_000300: 1.751388e6

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.386e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
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GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2958
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 46157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.301e1

DP
type: SiteQuality
SIO_000300: 1.737934e6

MQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.89e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.113e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.681e0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7497
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
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GenotypeQuality
all individuals: 2958
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
all individuals: 1367
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.739769e6

QD
type: SiteQuality
SIO_000300: 1.375e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.777e0

VQSLOD
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-1

FS
type: SiteQuality
SIO_000300: 2.999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

GenotypeQuality
all individuals: 1370
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 23
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 266
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GenotypeQuality
all individuals: 2956
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7500
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GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: -8.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.740107e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

QD
type: SiteQuality
SIO_000300: 1.321e1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 22
bin: 2.25e1
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GenotypeQuality
all individuals: 596
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GenotypeQuality
all individuals: 266
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GenotypeQuality
all individuals: 1368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10406
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Latino
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allele frequency: 0.0e0
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Other
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

QD
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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African
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Latino
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East Asian
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allele count: 0
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European (Non-Finnish)
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allele num: 66720
num of homozygotes: 0

Other
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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MQ
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FS
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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East Asian
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QD
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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FS
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MQ
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.832361773538245e-5
allele num: 11322
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

DP
type: SiteQuality
SIO_000300: 1.705235e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

FS
type: SiteQuality
SIO_000300: 1.715e0

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522209029743965e-5
allele num: 65694
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.704955e6

FS
type: SiteQuality
SIO_000300: 3.929e0

VQSLOD
type: SiteQuality
SIO_000300: -2.935e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.831e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524808636516117e-5
allele num: 65582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.125e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.699846e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.063e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 523
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563819472680074e-5
allele num: 63946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.32e-1

QD
type: SiteQuality
SIO_000300: 3.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.029e1

DP
type: SiteQuality
SIO_000300: 1.633677e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 519
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variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.761413843888071e-4
allele num: 10864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63942
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.960159362549801e-5
allele num: 10040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

FS
type: SiteQuality
SIO_000300: 1.383e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.632556e6

QD
type: SiteQuality
SIO_000300: 1.067e1

VQSLOD
type: SiteQuality
SIO_000300: 8.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.599846414744185e-5
allele num: 62506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.299e1

FS
type: SiteQuality
SIO_000300: 2.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-1

DP
type: SiteQuality
SIO_000300: 1.563556e6

MQRankSum
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SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.60040970488445e-5
allele num: 62484
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.353240152477763e-5
allele num: 15740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.561569e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60886
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.278445410380977e-4
allele num: 7822
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60586
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.467468632777131e-5
allele num: 15462
num of homozygotes: 0

MQ
type: SiteQuality
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.042318115488847e-4
allele num: 9594
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59566
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Latino
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MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
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ReadPosRankSum
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6030
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.720933434294762e-5
allele num: 58108
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9596
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.604e0

ClippingRankSum
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SIO_000300: -1.536e0

InbreedingCoeff
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SIO_000300: -2.1e-3

QD
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VQSLOD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9414
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.738828029907842e-5
allele num: 57510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.261679e6

MQ
type: SiteQuality
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MQRankSum
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SIO_000300: -1.516e0

InbreedingCoeff
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

VQSLOD
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ReadPosRankSum
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SIO_000300: -3.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

QD
type: SiteQuality
SIO_000300: 2.047e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.746175874834113e-5
allele num: 57268
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.829e0

BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.244572e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.756975191510296e-5
allele num: 56916
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

Latino
type: Population
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allele frequency: 1.211827435773146e-4
allele num: 8252
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 1.619695497246518e-4
allele num: 6174
num of homozygotes: 0

European (Non-Finnish)
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African
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Latino
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South Asian
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East Asian
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Other
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.89000189000189e-4
allele num: 10582
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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Other
type: Population
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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MQ
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

QD
type: SiteQuality
SIO_000300: 1.27e1

DP
type: SiteQuality
SIO_000300: 1.095558e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.279941488389102e-4
allele num: 54690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8852
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.827e1

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.146389e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.128923007450892e-4
allele num: 8858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54638
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.712e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.572e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

VQSLOD
type: SiteQuality
SIO_000300: -5.413e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.163954e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.570845114671693e-4
allele num: 6366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.211637e6

VQSLOD
type: SiteQuality
SIO_000300: -6.82e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQ
type: SiteQuality
SIO_000300: 5.701e1

FS
type: SiteQuality
SIO_000300: 6.9776e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

QD
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.08e-1

GenotypeQuality
all individuals: 5716
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 977
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GenotypeQuality
all individuals: 5220
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.570845114671693e-4
allele num: 6366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8692
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.701e1

FS
type: SiteQuality
SIO_000300: 6.9776e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.08e-1

DP
type: SiteQuality
SIO_000300: 1.211637e6

VQSLOD
type: SiteQuality
SIO_000300: -6.82e0

QD
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1381
bin: 3.25e1
variant carriers: 151

GenotypeQuality
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bin: 7.75e1
variant carriers: 36

GenotypeQuality
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variant carriers: 13

GenotypeQuality
all individuals: 961
bin: 5.75e1
variant carriers: 81

GenotypeQuality
all individuals: 1771
bin: 1.25e1
variant carriers: 269

GenotypeQuality
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bin: 4.75e1
variant carriers: 80

GenotypeQuality
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bin: 6.75e1
variant carriers: 36

GenotypeQuality
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bin: 2.75e1
variant carriers: 173

GenotypeQuality
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bin: 5.25e1
variant carriers: 90

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 180

GenotypeQuality
all individuals: 1182
bin: 4.25e1
variant carriers: 124

GenotypeQuality
all individuals: 600
bin: 8.25e1
variant carriers: 25

East Asian
type: Population
allele count: 49
allele frequency: 2.337786259541985e-2
allele num: 2096
num of homozygotes: 1

Latino
type: Population
allele count: 104
allele frequency: 3.049853372434018e-2
allele num: 3410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 497
allele frequency: 2.185960591133005e-2
allele num: 22736
num of homozygotes: 1

African
type: Population
allele count: 76
allele frequency: 1.650738488271069e-2
allele num: 4604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 102
allele frequency: 3.531855955678671e-2
allele num: 2888
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 3.767123287671233e-2
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 59
allele frequency: 1.665725578769057e-2
allele num: 3542
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

MQ
type: SiteQuality
SIO_000300: 5.674e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 1.107815e6

FS
type: SiteQuality
SIO_000300: 7.045e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 6.78e0

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 34

GenotypeQuality
all individuals: 1588
bin: 1.75e1
variant carriers: 80

GenotypeQuality
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bin: 2.5e0
variant carriers: 191

GenotypeQuality
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GenotypeQuality
all individuals: 1391
bin: 3.75e1
variant carriers: 84

GenotypeQuality
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bin: 4.75e1
variant carriers: 76

GenotypeQuality
all individuals: 1891
bin: 2.25e1
variant carriers: 63

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 91

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 600
bin: 8.25e1
variant carriers: 21

GenotypeQuality
all individuals: 699
bin: 7.75e1
variant carriers: 26

GenotypeQuality
all individuals: 797
bin: 6.75e1
variant carriers: 54

European (Finnish)
type: Population
allele count: 35
allele frequency: 1.21191135734072e-2
allele num: 2888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 286
allele frequency: 1.257916959887403e-2
allele num: 22736
num of homozygotes: 0

Latino
type: Population
allele count: 69
allele frequency: 2.023460410557185e-2
allele num: 3410
num of homozygotes: 0

East Asian
type: Population
allele count: 37
allele frequency: 1.765267175572519e-2
allele num: 2096
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 8.253692441355343e-3
allele num: 4604
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 6.84931506849315e-3
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 35
allele frequency: 9.881422924901186e-3
allele num: 3542
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 5.674e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

FS
type: SiteQuality
SIO_000300: 7.045e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

DP
type: SiteQuality
SIO_000300: 1.107815e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

QD
type: SiteQuality
SIO_000300: 6.78e0

GenotypeQuality
all individuals: 797
bin: 6.75e1
variant carriers: 313

GenotypeQuality
all individuals: 1463
bin: 2.75e1
variant carriers: 402

GenotypeQuality
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bin: 2.25e1
variant carriers: 400

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 381

GenotypeQuality
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bin: 1.25e1
variant carriers: 360

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 1784

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 600
bin: 8.25e1
variant carriers: 214

GenotypeQuality
all individuals: 961
bin: 5.75e1
variant carriers: 358

GenotypeQuality
all individuals: 1391
bin: 3.75e1
variant carriers: 419

Latino
type: Population
allele count: 438
allele frequency: 1.284457478005865e-1
allele num: 3410
num of homozygotes: 2

Other
type: Population
allele count: 49
allele frequency: 1.678082191780822e-1
allele num: 292
num of homozygotes: 1

East Asian
type: Population
allele count: 430
allele frequency: 2.051526717557252e-1
allele num: 2096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 504
allele frequency: 1.745152354570637e-1
allele num: 2888
num of homozygotes: 0

African
type: Population
allele count: 239
allele frequency: 5.191138140747176e-2
allele num: 4604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3253
allele frequency: 1.430770584095707e-1
allele num: 22736
num of homozygotes: 4

South Asian
type: Population
allele count: 653
allele frequency: 1.843591191417278e-1
allele num: 3542
num of homozygotes: 2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.674e1

QD
type: SiteQuality
SIO_000300: 6.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

FS
type: SiteQuality
SIO_000300: 7.045e0

DP
type: SiteQuality
SIO_000300: 1.107815e6

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

GenotypeQuality
all individuals: 1891
bin: 2.25e1
variant carriers: 202

GenotypeQuality
all individuals: 797
bin: 6.75e1
variant carriers: 128

GenotypeQuality
all individuals: 1771
bin: 1.25e1
variant carriers: 203

GenotypeQuality
all individuals: 1054
bin: 4.75e1
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GenotypeQuality
all individuals: 562
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variant carriers: 98

GenotypeQuality
all individuals: 1381
bin: 3.25e1
variant carriers: 191

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 96

GenotypeQuality
all individuals: 877
bin: 6.25e1
variant carriers: 159

GenotypeQuality
all individuals: 600
bin: 8.25e1
variant carriers: 104

GenotypeQuality
all individuals: 2322
bin: 7.5e0
variant carriers: 202

GenotypeQuality
all individuals: 961
bin: 5.75e1
variant carriers: 157

GenotypeQuality
all individuals: 699
bin: 7.75e1
variant carriers: 118

GenotypeQuality
all individuals: 1182
bin: 4.25e1
variant carriers: 173

GenotypeQuality
all individuals: 1061
bin: 5.25e1
variant carriers: 162

Latino
type: Population
allele count: 176
allele frequency: 5.161290322580645e-2
allele num: 3410
num of homozygotes: 0

South Asian
type: Population
allele count: 237
allele frequency: 6.691134952004517e-2
allele num: 3542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1404
allele frequency: 6.175228712174525e-2
allele num: 22736
num of homozygotes: 4

African
type: Population
allele count: 346
allele frequency: 7.515204170286707e-2
allele num: 4604
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 185
allele frequency: 6.405817174515235e-2
allele num: 2888
num of homozygotes: 1

East Asian
type: Population
allele count: 141
allele frequency: 6.727099236641221e-2
allele num: 2096
num of homozygotes: 1

Other
type: Population
allele count: 21
allele frequency: 7.191780821917808e-2
allele num: 292
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 6.78e0

FS
type: SiteQuality
SIO_000300: 7.045e0

MQ
type: SiteQuality
SIO_000300: 5.674e1

DP
type: SiteQuality
SIO_000300: 1.107815e6

South Asian
type: Population
allele count: 648
allele frequency: 1.829474872953134e-1
allele num: 3542
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 701
allele frequency: 2.427285318559557e-1
allele num: 2888
num of homozygotes: 12

European (Non-Finnish)
type: Population
allele count: 5559
allele frequency: 2.445021111893033e-1
allele num: 22736
num of homozygotes: 44

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 6.78e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

FS
type: SiteQuality
SIO_000300: 7.045e0

MQ
type: SiteQuality
SIO_000300: 5.674e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 1.107815e6

European (Finnish)
type: Population
allele count: 93
allele frequency: 3.220221606648199e-2
allele num: 2888
num of homozygotes: 0

South Asian
type: Population
allele count: 95
allele frequency: 2.682100508187465e-2
allele num: 3542
num of homozygotes: 0

Latino
type: Population
allele count: 132
allele frequency: 3.870967741935484e-2
allele num: 3410
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

FS
type: SiteQuality
SIO_000300: 7.045e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

QD
type: SiteQuality
SIO_000300: 6.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.674e1

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

DP
type: SiteQuality
SIO_000300: 1.107815e6