16-11940536-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940536
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940536
    reference: chr 16
allele count: 1
allele frequency: 8.251233559417133e-6
allele num: 121194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.533+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.533+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*273+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*400+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.533+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4729A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-128+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*376+16A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4679A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.431+16A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44074
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-11940544-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940544
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940544
    reference: chr 16
allele count: 29
allele frequency: 2.393687268885367e-4
allele num: 121152
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.533+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.431+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-128+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*273+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4687T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*376+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.533+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*400+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.533+8T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4721T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.533+8T>C
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

16-11940548-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940548
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940548
    reference: chr 16
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*400+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*273+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4717A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*376+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.533+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.533+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4691A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-128+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.533+4A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.431+4A>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.533+4A>T
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

16-11940549-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940549
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940550
    reference: chr 16
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.533+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4715dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*400+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.533+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*273+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4693dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*376+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-128+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.533+2dupT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.431+2dupT
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7770
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.533+2dupT
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-11940550-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940550
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940550
    reference: chr 16
allele count: 2
allele frequency: 1.651554938975045e-5
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*376+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.431+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.533+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.533+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4715T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.533+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*400+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-128+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*273+2T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4693T>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7770
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8340
  bin: 6.25e1
  variant carriers: 0
hgvs: c.533+2T>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

16-11940552-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940552
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940552
    reference: chr 16
allele count: 1
allele frequency: 8.259138737012504e-6
allele num: 121078
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.431A>C
  hgvsp: ENSP00000460343.1:p.Lys144Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-128A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.533A>C
  hgvsp: ENSP00000347897.5:p.Lys178Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4695A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.533A>C
  hgvsp: ENSP00000460871.1:p.Lys178Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*273A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4713A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*376A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*400A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.533A>C
  hgvsp: ENSP00000460748.1:p.Asn178Thr
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys178Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-11940554-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940554
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940554
    reference: chr 16
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.429G>T
  hgvsp: ENSP00000460343.1:p.Lys143Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*271G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-130G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*398G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.531G>T
  hgvsp: ENSP00000347897.5:p.Lys177Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.531G>T
  hgvsp: ENSP00000460748.1:p.Lys177Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.531G>T
  hgvsp: ENSP00000460871.1:p.Lys177Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*374G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4711G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4697G>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys177Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-11940555-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940555
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940555
    reference: chr 16
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.530A>G
  hgvsp: ENSP00000460748.1:p.Lys177Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-131A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*397A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.428A>G
  hgvsp: ENSP00000460343.1:p.Lys143Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*373A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4698A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.530A>G
  hgvsp: ENSP00000460871.1:p.Lys177Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*270A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4710A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.530A>G
  hgvsp: ENSP00000347897.5:p.Lys177Arg
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys177Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

16-11940556-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940556
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940556
    reference: chr 16
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.427A>G
  hgvsp: ENSP00000460343.1:p.Lys143Glu
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.529A>G
  hgvsp: ENSP00000460748.1:p.Lys177Glu
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.529A>G
  hgvsp: ENSP00000347897.5:p.Lys177Glu
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.106-4699A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*396A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-132A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.529A>G
  hgvsp: ENSP00000460871.1:p.Lys177Glu
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*269A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*372A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4709A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2399
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys177Glu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

16-11940565-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940565
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940565
    reference: chr 16
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.418T>C
  hgvsp: ENSP00000460343.1:p.Tyr140His
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*260T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-141T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.520T>C
  hgvsp: ENSP00000460871.1:p.Tyr174His
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4700T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*387T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.520T>C
  hgvsp: ENSP00000347897.5:p.Tyr174His
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4700T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*363T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.520T>C
  hgvsp: ENSP00000460748.1:p.Tyr174His
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8259
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr174His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/16-11940568-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940568
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940568
    reference: chr 16
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*257T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-144T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*384T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4697T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.415T>G
  hgvsp: ENSP00000460343.1:p.Phe139Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.517T>G
  hgvsp: ENSP00000347897.5:p.Phe173Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.517T>G
  hgvsp: ENSP00000460871.1:p.Phe173Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.517T>G
  hgvsp: ENSP00000460748.1:p.Phe173Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*360T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4697T>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe173Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

16-11940568-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940568
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940568
    reference: chr 16
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*257T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4697T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.415T>A
  hgvsp: ENSP00000460343.1:p.Phe139Ile
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.517T>A
  hgvsp: ENSP00000347897.5:p.Phe173Ile
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-144T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.517T>A
  hgvsp: ENSP00000460748.1:p.Phe173Ile
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.517T>A
  hgvsp: ENSP00000460871.1:p.Phe173Ile
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*360T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4697T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*384T>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe173Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-11940577-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940577
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940577
    reference: chr 16
allele count: 1
allele frequency: 8.277186418792524e-6
allele num: 120814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.406G>C
  hgvsp: ENSP00000460343.1:p.Gly136Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-153G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4688G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.508G>C
  hgvsp: ENSP00000460871.1:p.Gly170Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*351G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*248G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.508G>C
  hgvsp: ENSP00000347897.5:p.Gly170Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4688G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.508G>C
  hgvsp: ENSP00000460748.1:p.Gly170Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*375G>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly170Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

16-11940579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940579
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940579
    reference: chr 16
allele count: 15
allele frequency: 1.241824654358805e-4
allele num: 120790
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.506T>C
  hgvsp: ENSP00000460871.1:p.Ile169Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.506T>C
  hgvsp: ENSP00000347897.5:p.Ile169Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*349T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*373T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*246T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.404T>C
  hgvsp: ENSP00000460343.1:p.Ile135Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4686T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.506T>C
  hgvsp: ENSP00000460748.1:p.Ile169Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4686T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-155T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7778
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile169Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

16-11940583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940583
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940583
    reference: chr 16
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.400C>T
  hgvsp: ENSP00000460343.1:p.Leu134Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.502C>T
  hgvsp: ENSP00000347897.5:p.Leu168Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.502C>T
  hgvsp: ENSP00000460871.1:p.Leu168Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*369C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4682C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*242C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.502C>T
  hgvsp: ENSP00000460748.1:p.Leu168Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-159C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*345C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4682C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu168Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

16-11940587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940587
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940587
    reference: chr 16
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4678C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*341C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*238C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.396C>T
  hgvsp: ENST00000571988.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.498C>T
  hgvsp: ENST00000573251.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4678C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.498C>T
  hgvsp: ENST00000571133.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-163C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*365C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.498C>T
  hgvsp: ENST00000355674.5:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro166Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

16-11940593-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940593
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940593
    reference: chr 16
allele count: 2
allele frequency: 1.658072325114821e-5
allele num: 120622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.492C>G
  hgvsp: ENST00000573251.1:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.294C>G
  hgvsp: ENST00000573791.1:c.294C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-169C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.390C>G
  hgvsp: ENST00000571988.1:c.390C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*335C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*359C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*232C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.492C>G
  hgvsp: ENST00000571133.1:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.492C>G
  hgvsp: ENST00000355674.5:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4672C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4672C>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu164Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

16-11940598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940598
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940598
    reference: chr 16
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*354C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-174C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.487C>T
  hgvsp: ENSP00000460871.1:p.Arg163Trp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4667C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.385C>T
  hgvsp: ENSP00000460343.1:p.Arg129Trp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.487C>T
  hgvsp: ENSP00000347897.5:p.Arg163Trp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.487C>T
  hgvsp: ENSP00000460748.1:p.Arg163Trp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*330C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.289C>T
  hgvsp: ENSP00000459331.1:p.Arg97Trp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4667C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*227C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg163Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

16-11940606-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940606
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940606
    reference: chr 16
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.479G>C
  hgvsp: ENSP00000460871.1:p.Arg160Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.479G>C
  hgvsp: ENSP00000460748.1:p.Arg160Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*219G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.377G>C
  hgvsp: ENSP00000460343.1:p.Arg126Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.281G>C
  hgvsp: ENSP00000459331.1:p.Arg94Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.479G>C
  hgvsp: ENSP00000347897.5:p.Arg160Thr
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*346G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4659G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-182G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*322G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4659G>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg160Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-11940606-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940606
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940606
    reference: chr 16
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.479G>A
  hgvsp: ENSP00000460871.1:p.Arg160Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*219G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*346G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4659G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.377G>A
  hgvsp: ENSP00000460343.1:p.Arg126Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.281G>A
  hgvsp: ENSP00000459331.1:p.Arg94Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*322G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.479G>A
  hgvsp: ENSP00000460748.1:p.Arg160Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-182G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.479G>A
  hgvsp: ENSP00000347897.5:p.Arg160Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4659G>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg160Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-11940615-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940615
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940615
    reference: chr 16
allele count: 1
allele frequency: 8.304682179812978e-6
allele num: 120414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*210C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4650C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*337C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.470C>G
  hgvsp: ENSP00000460748.1:p.Thr157Ser
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.470C>G
  hgvsp: ENSP00000460871.1:p.Thr157Ser
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.470C>G
  hgvsp: ENSP00000347897.5:p.Thr157Ser
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4650C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-191C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*313C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.272C>G
  hgvsp: ENSP00000459331.1:p.Thr91Ser
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.368C>G
  hgvsp: ENSP00000460343.1:p.Thr123Ser
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr157Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-11940615-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940615
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940615
    reference: chr 16
allele count: 1
allele frequency: 8.304682179812978e-6
allele num: 120414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4650C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.368C>A
  hgvsp: ENSP00000460343.1:p.Thr123Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*210C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*337C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4650C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.470C>A
  hgvsp: ENSP00000460871.1:p.Thr157Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*313C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.470C>A
  hgvsp: ENSP00000347897.5:p.Thr157Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.470C>A
  hgvsp: ENSP00000460748.1:p.Thr157Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-191C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.272C>A
  hgvsp: ENSP00000459331.1:p.Thr91Asn
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr157Asn
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

16-11940626-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940626
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940626
    reference: chr 16
allele count: 1
allele frequency: 8.311722853913159e-6
allele num: 120312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.357T>C
  hgvsp: ENST00000571988.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*326T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.459T>C
  hgvsp: ENST00000571133.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*302T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-202T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*199T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4639T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.459T>C
  hgvsp: ENST00000355674.5:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.261T>C
  hgvsp: ENST00000573791.1:c.261T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.459T>C
  hgvsp: ENST00000573251.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4639T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp153Asp
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

16-11940627-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940627
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940627
    reference: chr 16
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-203A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.260A>T
  hgvsp: ENSP00000459331.1:p.Asp87Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.458A>T
  hgvsp: ENSP00000460748.1:p.Asp153Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4638A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.458A>T
  hgvsp: ENSP00000460871.1:p.Asp153Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*301A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*198A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.356A>T
  hgvsp: ENSP00000460343.1:p.Asp119Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.458A>T
  hgvsp: ENSP00000347897.5:p.Asp153Val
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4638A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*325A>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp153Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-11940634-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940634
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940634
    reference: chr 16
allele count: 18
allele frequency: 1.496757026442707e-4
allele num: 120260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.253A>C
  hgvsp: ENSP00000459331.1:p.Ser85Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.349A>C
  hgvsp: ENSP00000460343.1:p.Ser117Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4631A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4631A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.451A>C
  hgvsp: ENSP00000460748.1:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.451A>C
  hgvsp: ENSP00000347897.5:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-210A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*191A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.451A>C
  hgvsp: ENSP00000460871.1:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*294A>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*318A>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser151Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-11940646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940646
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940646
    reference: chr 16
allele count: 12
allele frequency: 9.988014382740711e-5
allele num: 120144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.241C>T
  hgvsp: ENSP00000459331.1:p.Arg81Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4619C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4619C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.439C>T
  hgvsp: ENSP00000347897.5:p.Arg147Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*179C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.439C>T
  hgvsp: ENSP00000460871.1:p.Arg147Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.337C>T
  hgvsp: ENSP00000460343.1:p.Arg113Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*306C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.439C>T
  hgvsp: ENSP00000460748.1:p.Arg147Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*282C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-222C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg147Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-11940648-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940648
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940648
    reference: chr 16
allele count: 1
allele frequency: 8.324731111185109e-6
allele num: 120124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*177T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-224T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.437T>C
  hgvsp: ENSP00000460748.1:p.Leu146Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*280T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4617T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.239T>C
  hgvsp: ENSP00000459331.1:p.Leu80Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.437T>C
  hgvsp: ENSP00000460871.1:p.Leu146Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4617T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.335T>C
  hgvsp: ENSP00000460343.1:p.Leu112Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.437T>C
  hgvsp: ENSP00000347897.5:p.Leu146Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*304T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu146Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP

16-11940649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940649
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940649
    reference: chr 16
allele count: 2
allele frequency: 1.665168015452759e-5
allele num: 120108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-225C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*176C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.436C>T
  hgvsp: ENSP00000460748.1:p.Leu146Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4616C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.436C>T
  hgvsp: ENSP00000347897.5:p.Leu146Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*279C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.436C>T
  hgvsp: ENSP00000460871.1:p.Leu146Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.238C>T
  hgvsp: ENSP00000459331.1:p.Leu80Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.334C>T
  hgvsp: ENSP00000460343.1:p.Leu112Phe
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*303C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4616C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu146Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

16-11940650-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940650
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940650
    reference: chr 16
allele count: 3
allele frequency: 2.49820961644155e-5
allele num: 120086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*302G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.435G>A
  hgvsp: ENST00000573251.1:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4615G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.333G>A
  hgvsp: ENST00000571988.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.435G>A
  hgvsp: ENST00000571133.1:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.435G>A
  hgvsp: ENST00000355674.5:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4615G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.237G>A
  hgvsp: ENST00000573791.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-226G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*278G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*175G>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys145Lys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-11940658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940658
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940658
    reference: chr 16
allele count: 1
allele frequency: 8.334166750008334e-6
allele num: 119988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*294G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*167G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.229G>A
  hgvsp: ENSP00000459331.1:p.Glu77Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.427G>A
  hgvsp: ENSP00000460871.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4607G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.427G>A
  hgvsp: ENSP00000460748.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.427G>A
  hgvsp: ENSP00000347897.5:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.325G>A
  hgvsp: ENSP00000460343.1:p.Glu109Lys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*270G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-234G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4607G>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu143Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-11940660-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940660
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940660
    reference: chr 16
allele count: 1
allele frequency: 8.33541718763024e-6
allele num: 119970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-236A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.323A>G
  hgvsp: ENSP00000460343.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.425A>G
  hgvsp: ENSP00000347897.5:p.Tyr142Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*292A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.425A>G
  hgvsp: ENSP00000460871.1:p.Tyr142Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*165A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.425A>G
  hgvsp: ENSP00000460748.1:p.Tyr142Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.227A>G
  hgvsp: ENSP00000459331.1:p.Tyr76Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*268A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4605A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4605A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr142Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-11940661-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940661
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940661
    reference: chr 16
allele count: 1
allele frequency: 8.335556148306214e-6
allele num: 119968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*164T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.424T>G
  hgvsp: ENSP00000347897.5:p.Tyr142Asp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*291T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.226T>G
  hgvsp: ENSP00000459331.1:p.Tyr76Asp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.322T>G
  hgvsp: ENSP00000460343.1:p.Tyr108Asp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*267T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.424T>G
  hgvsp: ENSP00000460871.1:p.Tyr142Asp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.424T>G
  hgvsp: ENSP00000460748.1:p.Tyr142Asp
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4604T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-237T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4604T>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr142Asp
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-11940664-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940664
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940664
    reference: chr 16
allele count: 1
allele frequency: 8.338336335134414e-6
allele num: 119928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.223T>C
  hgvsp: ENSP00000459331.1:p.Ser75Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.319T>C
  hgvsp: ENSP00000460343.1:p.Ser107Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4601T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.421T>C
  hgvsp: ENSP00000460871.1:p.Ser141Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.421T>C
  hgvsp: ENSP00000460748.1:p.Ser141Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*264T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-240T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.421T>C
  hgvsp: ENSP00000347897.5:p.Ser141Pro
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*161T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4601T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*288T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser141Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-11940668-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940668
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940668
    reference: chr 16
allele count: 1
allele frequency: 8.340561820244212e-6
allele num: 119896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*157T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.417T>C
  hgvsp: ENST00000571133.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4597T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-244T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.315T>C
  hgvsp: ENST00000571988.1:c.315T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4597T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*284T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.417T>C
  hgvsp: ENST00000573251.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.417T>C
  hgvsp: ENST00000355674.5:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.219T>C
  hgvsp: ENST00000573791.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*260T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr139Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

16-11940677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940677
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940677
    reference: chr 16
allele count: 3
allele frequency: 2.504173622704507e-5
allele num: 119800
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*251G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.210G>A
  hgvsp: ENST00000573791.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.306G>A
  hgvsp: ENST00000571988.1:c.306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*275G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.408G>A
  hgvsp: ENST00000573251.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4588G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-253G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4588G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.408G>A
  hgvsp: ENST00000355674.5:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.408G>A
  hgvsp: ENST00000571133.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*148G>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys136Lys
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

16-11940680-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940680
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940680
    reference: chr 16
allele count: 3
allele frequency: 2.50505185457339e-5
allele num: 119758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*272A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.207A>T
  hgvsp: ENST00000573791.1:c.207A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4585A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.405A>T
  hgvsp: ENST00000571133.1:c.405A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.405A>T
  hgvsp: ENST00000355674.5:c.405A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*145A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.303A>T
  hgvsp: ENST00000571988.1:c.303A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.405A>T
  hgvsp: ENST00000573251.1:c.405A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-256A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*248A>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4585A>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu135Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-11940689-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940689
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940689
    reference: chr 16
allele count: 1
allele frequency: 8.359107247345984e-6
allele num: 119630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4576C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.198C>A
  hgvsp: ENST00000573791.1:c.198C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.396C>A
  hgvsp: ENST00000573251.1:c.396C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-265C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*263C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.396C>A
  hgvsp: ENST00000355674.5:c.396C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.396C>A
  hgvsp: ENST00000571133.1:c.396C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*239C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.294C>A
  hgvsp: ENST00000571988.1:c.294C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*136C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4576C>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu132Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

16-11940692-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940692
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940692
    reference: chr 16
allele count: 1
allele frequency: 8.364141253617491e-6
allele num: 119558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*133C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.291C>T
  hgvsp: ENST00000571988.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4573C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*236C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.393C>T
  hgvsp: ENST00000573251.1:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-268C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.393C>T
  hgvsp: ENST00000355674.5:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.393C>T
  hgvsp: ENST00000571133.1:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.195C>T
  hgvsp: ENST00000573791.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*260C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4573C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser131Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

16-11940693-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940693
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940693
    reference: chr 16
allele count: 16
allele frequency: 1.338665684978498e-4
allele num: 119522
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.194C>G
  hgvsp: ENSP00000459331.1:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.392C>G
  hgvsp: ENSP00000460871.1:p.Ser131Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*235C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4572C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*259C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.290C>G
  hgvsp: ENSP00000460343.1:p.Ser97Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.392C>G
  hgvsp: ENSP00000347897.5:p.Ser131Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-269C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*132C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.392C>G
  hgvsp: ENSP00000460748.1:p.Ser131Cys
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4572C>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
hgvs: p.Ser131Cys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

16-11940699-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940699
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940699
    reference: chr 16
allele count: 1
allele frequency: 8.374227477515199e-6
allele num: 119414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*253T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*126T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4566T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.284T>A
  hgvsp: ENSP00000460343.1:p.Ile95Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.386T>A
  hgvsp: ENSP00000460871.1:p.Ile129Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.386T>A
  hgvsp: ENSP00000460748.1:p.Ile129Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.386T>A
  hgvsp: ENSP00000347897.5:p.Ile129Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.188T>A
  hgvsp: ENSP00000459331.1:p.Ile63Asn
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*229T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4566T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-275T>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile129Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

16-11940701-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940701
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940701
    reference: chr 16
allele count: 1
allele frequency: 8.377454594196099e-6
allele num: 119368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4564G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4564G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-1G>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-1G>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.385-1G>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-11940709-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940709
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940709
    reference: chr 16
allele count: 5
allele frequency: 4.19702514857469e-5
allele num: 119132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4556A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-9A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4556A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-9A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

16-11940711-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940711
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940711
    reference: chr 16
allele count: 2
allele frequency: 1.67993817827504e-5
allele num: 119052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4554A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4554A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-11A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-11A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

16-11940711-TAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940711
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940709
    reference: chr 16
allele count: 6
allele frequency: 5.039814534825118e-5
allele num: 119052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-13_*125-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-13_283-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4552_105+4553delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-13_385-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-13_385-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-13_385-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4552_105+4553delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-13_187-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-13_*252-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-13_-276-12delCT
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-13_*228-12delCT
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: TAG
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

16-11940713-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940713
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940713
    reference: chr 16
allele count: 13
allele frequency: 1.092088240729851e-4
allele num: 119038
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4552C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4552C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-13C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-13C>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-11940714-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940714
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940714
    reference: chr 16
allele count: 3
allele frequency: 2.520881300102516e-5
allele num: 119006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4551T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4551T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-14T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-14T>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

16-11940714-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940714
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940713
    reference: chr 16
allele count: 1
allele frequency: 8.402937667008386e-6
allele num: 119006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4550delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4550delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-15delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-15delC
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: AG
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-11940715-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940715
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940715
    reference: chr 16
allele count: 1
allele frequency: 8.403926314374075e-6
allele num: 118992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4550C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-15C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4550C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-15C>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

16-11940719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940719
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940719
    reference: chr 16
allele count: 1
allele frequency: 8.407883231317684e-6
allele num: 118936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4546T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4546T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-19T>C
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-19T>C
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-11940723-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940723
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940723
    reference: chr 16
allele count: 1
allele frequency: 8.41226845231085e-6
allele num: 118874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4542T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4542T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-23T>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-23T>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-11940724-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940724
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940724
    reference: chr 16
allele count: 7
allele frequency: 5.890470901073749e-5
allele num: 118836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4541T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4541T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-24T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-24T>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4772
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

16-11940729-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940729
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940728
    reference: chr 16
allele count: 2
allele frequency: 1.684352366515075e-5
allele num: 118740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4535delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4535delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-30delC
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-30delC
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: AG
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

16-11940730-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940730
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940730
    reference: chr 16
allele count: 3
allele frequency: 2.527081894300588e-5
allele num: 118714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4535C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4535C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-30C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-30C>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

16-11940733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940733
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940733
    reference: chr 16
allele count: 2
allele frequency: 1.685686833100147e-5
allele num: 118646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4532C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4532C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-33C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-33C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

16-11940735-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940735
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940735
    reference: chr 16
allele count: 1
allele frequency: 8.434405627435435e-6
allele num: 118562
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4530A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4530A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-35A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-35A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-11940738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940738
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940738
    reference: chr 16
allele count: 18
allele frequency: 1.519808166435881e-4
allele num: 118436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4527C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4527C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-38C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-38C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-11940738-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940738
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940738
    reference: chr 16
allele count: 1
allele frequency: 8.443378702421561e-6
allele num: 118436
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4527C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4527C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-38C>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-38C>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

16-11940752-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11940752
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11940752
    reference: chr 16
allele count: 1
allele frequency: 8.467974121871083e-6
allele num: 118092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.283-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.385-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*125-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.187-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.385-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*228-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*252-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-276-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+4513T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.385-52T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+4513T>A
  variant of: http://identifiers.org/hgnc/24534
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

16-11941474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941474
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941474
    reference: chr 16
allele count: 163
allele frequency: 1.354248018477593e-3
allele num: 120362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3791C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3791C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.442C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+51C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+51C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 8845
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

16-11941474-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941474
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941474
    reference: chr 16
allele count: 1
allele frequency: 8.30827005200977e-6
allele num: 120362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.442C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3791C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3791C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+51C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+51C>G
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

16-11941476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941476
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941476
    reference: chr 16
allele count: 1
allele frequency: 8.307165761185599e-6
allele num: 120378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3789G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3789G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+49G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.440G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+49G>A
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

16-11941478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941478
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941478
    reference: chr 16
allele count: 473
allele frequency: 3.928114671051539e-3
allele num: 120414
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3787C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.438C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+47C>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3787C>T
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 8720
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 9.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 6.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
num of homozygotes: 5
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

16-11941478-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941478
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941478
    reference: chr 16
allele count: 2
allele frequency: 1.660936435962596e-5
allele num: 120414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3787C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3787C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.438C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+47C>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+47C>G
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

16-11941486-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941486
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941486
    reference: chr 16
allele count: 1
allele frequency: 8.300132802124834e-6
allele num: 120480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3779A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.430A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+39A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3779A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-11941487-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941487
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941487
    reference: chr 16
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3778G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.429G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+38G>T
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3778G>T
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-11941487-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941487
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941487
    reference: chr 16
allele count: 2
allele frequency: 1.660495159656609e-5
allele num: 120446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3778G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.429G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3778G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+38G>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+38G>A
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ

16-11941494-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941494
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941494
    reference: chr 16
allele count: 441
allele frequency: 3.657626275192834e-3
allele num: 120570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.422T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3771T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+31T>A
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3771T>A
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7359
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
num of homozygotes: 8
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

16-11941495-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11941495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 11941495
    reference: chr 16
allele count: 1
allele frequency: 8.29324929507381e-6
allele num: 120580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459622
  ensembl transcript: ENST00000570767
  gene symbol: RSL1D1
  hgvsc: ENST00000570767.1:c.*251+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460343
  ensembl transcript: ENST00000571988
  gene symbol: RSL1D1
  hgvsc: ENST00000571988.1:c.282+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460748
  ensembl transcript: ENST00000573251
  gene symbol: RSL1D1
  hgvsc: ENST00000573251.1:c.384+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171490
  ensembl transcript: ENST00000574287
  gene symbol: RSL1D1
  hgvsc: ENST00000574287.1:n.421A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000347897
  ensembl transcript: ENST00000355674
  gene symbol: RSL1D1
  hgvsc: ENST00000355674.5:c.384+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000458684
  ensembl transcript: ENST00000572090
  gene symbol: RSL1D1
  hgvsc: ENST00000572090.1:c.*227+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459331
  ensembl transcript: ENST00000573791
  gene symbol: RSL1D1
  hgvsc: ENST00000573791.1:c.186+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000379760
  ensembl transcript: ENST00000396503
  gene symbol: RSL1D1
  hgvsc: ENST00000396503.3:c.*124+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000442089
  ensembl transcript: ENST00000542106
  gene symbol: RSL1D1
  hgvsc: ENST00000542106.1:c.-277+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000460871
  ensembl transcript: ENST00000571133
  gene symbol: RSL1D1
  hgvsc: ENST00000571133.1:c.384+30A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000459207
  ensembl transcript: ENST00000573618
  gene symbol: RSL1D1
  hgvsc: ENST00000573618.1:c.105+3770A>G
  variant of: http://identifiers.org/hgnc/24534
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171490
  ensembl protein: ENSP00000461513
  ensembl transcript: ENST00000573029
  gene symbol: RSL1D1
  hgvsc: ENST00000573029.1:c.105+3770A>G
  variant of: http://identifiers.org/hgnc/24534
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8416
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

FS
type: SiteQuality
SIO_000300: 7.959e0

VQSLOD
type: SiteQuality
SIO_000300: -6.909999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 3.853156e6

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.491e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44086
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8387
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 23
allele frequency: 2.661420967368665e-3
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.008197459688316e-5
allele num: 66606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

DP
type: SiteQuality
SIO_000300: 3.858939e6

QD
type: SiteQuality
SIO_000300: 1.35e1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44082
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.156000000000001e0

FS
type: SiteQuality
SIO_000300: 9.058e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.76e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

DP
type: SiteQuality
SIO_000300: 3.85237e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44082
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.379999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.049e1

FS
type: SiteQuality
SIO_000300: 9.154999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 2.91e0

DP
type: SiteQuality
SIO_000300: 3.852112e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44081
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004085556356645e-5
allele num: 66576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.852149e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 4.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 8.02e-1

QD
type: SiteQuality
SIO_000300: 1.375e1

GenotypeDepth
all individuals: 2152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502313562886846e-5
allele num: 66564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.472e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.445e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.587e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 3.851802e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

GenotypeDepth
all individuals: 4133
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44081
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8308
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.43e0

DP
type: SiteQuality
SIO_000300: 3.851304e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.747e0

MQRankSum
type: SiteQuality
SIO_000300: -1.681e0

QD
type: SiteQuality
SIO_000300: 1.275e1

VQSLOD
type: SiteQuality
SIO_000300: -2.372e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.24e-1

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8294
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.85135e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.02e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.518e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 3.85118e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 2.203e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e0

QD
type: SiteQuality
SIO_000300: 1.285e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44081
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 304
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.008e-1

FS
type: SiteQuality
SIO_000300: 1.036e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

QD
type: SiteQuality
SIO_000300: 1.791e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 3.849995e6

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.849407e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.367e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.34e0

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 2.492e0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

QD
type: SiteQuality
SIO_000300: 1.367e1

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.367e1

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.367e0

FS
type: SiteQuality
SIO_000300: 2.492e0

DP
type: SiteQuality
SIO_000300: 3.849407e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeQuality
all individuals: 1386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.482e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.193e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

DP
type: SiteQuality
SIO_000300: 3.848549e6

FS
type: SiteQuality
SIO_000300: 4.68e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.292e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 1386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8172
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44081
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 7.804370447450572e-4
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.023914942321014e-5
allele num: 66402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.13e0

QD
type: SiteQuality
SIO_000300: 1.411e1

DP
type: SiteQuality
SIO_000300: 3.850381e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

MQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.43e-1

GenotypeQuality
all individuals: 435
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44077
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2377
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506841058405159e-5
allele num: 66364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.372e1

FS
type: SiteQuality
SIO_000300: 5.274e0

DP
type: SiteQuality
SIO_000300: 3.847301e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.233e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44077
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8128
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.112e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.055e0

QD
type: SiteQuality
SIO_000300: 1.241e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.746e-1

DP
type: SiteQuality
SIO_000300: 3.846767e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.542e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeDepth
all individuals: 3297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8093
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44076
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508113651444773e-5
allele num: 66308
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

DP
type: SiteQuality
SIO_000300: 3.846373e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.53e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeDepth
all individuals: 7764
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8069
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.845554e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.15e-1

FS
type: SiteQuality
SIO_000300: 9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.323e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.513e0

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeDepth
all individuals: 3640
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8056
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509661835748792e-5
allele num: 66240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.441e1

FS
type: SiteQuality
SIO_000300: 2.186e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

DP
type: SiteQuality
SIO_000300: 3.845064e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.142e0

VQSLOD
type: SiteQuality
SIO_000300: -1.014e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.233e0

GenotypeDepth
all individuals: 413
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8056
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66240
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.142e0

FS
type: SiteQuality
SIO_000300: 2.186e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.233e0

DP
type: SiteQuality
SIO_000300: 3.845064e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e0

VQSLOD
type: SiteQuality
SIO_000300: -1.014e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.441e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 5756
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.621e1

DP
type: SiteQuality
SIO_000300: 3.844121e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

GenotypeDepth
all individuals: 4284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66186
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

DP
type: SiteQuality
SIO_000300: 3.844121e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

QD
type: SiteQuality
SIO_000300: 1.621e1

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeDepth
all individuals: 3917
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44074
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.94e0

DP
type: SiteQuality
SIO_000300: 3.843328e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e0

FS
type: SiteQuality
SIO_000300: 4.799e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.403e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: -7.661e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.497e1

GenotypeDepth
all individuals: 3297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44073
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.51e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.671e0

DP
type: SiteQuality
SIO_000300: 3.843187e6

GenotypeDepth
all individuals: 3636
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44073
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.096090610157106e-3
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.57e-1

DP
type: SiteQuality
SIO_000300: 3.844051e6

VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

QD
type: SiteQuality
SIO_000300: 1.268e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.762e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeDepth
all individuals: 3636
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44067
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 2351
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.049606775559589e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.211313669674762e-4
allele num: 66044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 3.843136e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

QD
type: SiteQuality
SIO_000300: 1.45e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

GenotypeDepth
all individuals: 2682
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44066
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.922603691208574e-5
allele num: 10078
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.35e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 1.739e0

DP
type: SiteQuality
SIO_000300: 3.841116e6

GenotypeDepth
all individuals: 2720
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44066
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.029201502483945e-5
allele num: 66024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.695e0

FS
type: SiteQuality
SIO_000300: 5.29e-1

DP
type: SiteQuality
SIO_000300: 3.840788e6

QD
type: SiteQuality
SIO_000300: 1.24e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

GenotypeDepth
all individuals: 3965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44066
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.029752166272799e-5
allele num: 66012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.85e-1

DP
type: SiteQuality
SIO_000300: 3.840704e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.393e0

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.085e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeDepth
all individuals: 3965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44066
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516162290011523e-5
allele num: 65956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.359999999999999e0

DP
type: SiteQuality
SIO_000300: 3.839201e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.04e-1

GenotypeDepth
all individuals: 3264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44066
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7944
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-5
allele num: 65940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.358e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 3.83903e6

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

QD
type: SiteQuality
SIO_000300: 1.36e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

GenotypeDepth
all individuals: 2217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44065
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-5
allele num: 65940
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-1

FS
type: SiteQuality
SIO_000300: 3.469e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.71e-1

DP
type: SiteQuality
SIO_000300: 3.838962e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.262e0

QD
type: SiteQuality
SIO_000300: 1.256e1

GenotypeDepth
all individuals: 2217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44065
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 1.254e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

DP
type: SiteQuality
SIO_000300: 3.838474e6

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeDepth
all individuals: 3965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44065
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.095330976472023e-5
allele num: 16406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

DP
type: SiteQuality
SIO_000300: 3.837806e6

QD
type: SiteQuality
SIO_000300: 1.664e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

FS
type: SiteQuality
SIO_000300: 6.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

GenotypeDepth
all individuals: 2681
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7851
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44063
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.554840276934289e-5
allele num: 65864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.943e0

QD
type: SiteQuality
SIO_000300: 1.452e1

FS
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

DP
type: SiteQuality
SIO_000300: 3.836355e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.139e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

GenotypeDepth
all individuals: 4100
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44064
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7835
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.037113527303651e-5
allele num: 65852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.835396e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

QD
type: SiteQuality
SIO_000300: 1.58e1

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.28e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeDepth
all individuals: 2217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44063
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.713837574067619e-5
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

MQ
type: SiteQuality
SIO_000300: 5.993e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.739e0

DP
type: SiteQuality
SIO_000300: 3.832974e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.149e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 2.125e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeDepth
all individuals: 7752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44063
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65780
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.106497313141182e-5
allele num: 16376
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 3.831459e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

FS
type: SiteQuality
SIO_000300: 4.812e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

QD
type: SiteQuality
SIO_000300: 1.183e1

GenotypeDepth
all individuals: 4282
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44062
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7660
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.210287443267776e-3
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.017087062652563e-4
allele num: 9832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.122977739934314e-5
allele num: 65768
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 3.832166e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 1.424e1

FS
type: SiteQuality
SIO_000300: 2.272e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeDepth
all individuals: 7745
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3964
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44061
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.022285831118381e-4
allele num: 9782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.57e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

MQRankSum
type: SiteQuality
SIO_000300: 8.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 3.827856e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 9.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

FS
type: SiteQuality
SIO_000300: 2.723e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

GenotypeQuality
all individuals: 1212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44056
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1294
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7486
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.113964294448521e-5
allele num: 16356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65714
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 3.826537e6

MQRankSum
type: SiteQuality
SIO_000300: -8.85e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 6.860000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.413e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

GenotypeQuality
all individuals: 1344
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44057
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65622
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.062599534484871e-4
allele num: 16326
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

QD
type: SiteQuality
SIO_000300: 2.11e1

FS
type: SiteQuality
SIO_000300: 1.853e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

DP
type: SiteQuality
SIO_000300: 3.819785e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.6e0

VQSLOD
type: SiteQuality
SIO_000300: -1.058e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

GenotypeQuality
all individuals: 707
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44055
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524483200195134e-5
allele num: 65596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17096018735363e-4
allele num: 8540
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.816111e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

QD
type: SiteQuality
SIO_000300: 1.675e1

MQ
type: SiteQuality
SIO_000300: 6.007e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

FS
type: SiteQuality
SIO_000300: 7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44055
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.146899201170803e-5
allele num: 65596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 6.007e1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

FS
type: SiteQuality
SIO_000300: 7.02e-1

QD
type: SiteQuality
SIO_000300: 1.675e1

DP
type: SiteQuality
SIO_000300: 3.816111e6

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44056
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524762137106611e-5
allele num: 65584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.06597988717194e-4
allele num: 16308
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.02576112412178e-4
allele num: 8540
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.427e1

VQSLOD
type: SiteQuality
SIO_000300: 4.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

DP
type: SiteQuality
SIO_000300: 3.81596e6

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7085
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44050
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.575263077626963e-5
allele num: 65570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.628e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
SIO_000300: 1.426e1

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

FS
type: SiteQuality
SIO_000300: 8.03e-1

DP
type: SiteQuality
SIO_000300: 3.814274e6

GenotypeQuality
all individuals: 2053
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7085
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44050
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

DP
type: SiteQuality
SIO_000300: 3.814274e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.426e1

FS
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.628e0

GenotypeQuality
all individuals: 1329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44055
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.261e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.57e-1

DP
type: SiteQuality
SIO_000300: 3.813393e6

FS
type: SiteQuality
SIO_000300: 2.292e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

VQSLOD
type: SiteQuality
SIO_000300: -1.065e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.093e1

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44055
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 583
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6821
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.721437292865864e-5
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.129e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.135e0

VQSLOD
type: SiteQuality
SIO_000300: -1.38e0

QD
type: SiteQuality
SIO_000300: 2.074e1

DP
type: SiteQuality
SIO_000300: 3.808657e6

MQ
type: SiteQuality
SIO_000300: 6.011e1

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

GenotypeQuality
all individuals: 1313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44053
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6647
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526251526251526e-5
allele num: 65520
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.805009e6

QD
type: SiteQuality
SIO_000300: 1.737e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.913e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.53e0

FS
type: SiteQuality
SIO_000300: 1.661e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.47e0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44055
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.297748123436197e-4
allele num: 9592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.803492e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.62e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.156e1

MQRankSum
type: SiteQuality
SIO_000300: 5.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.649e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5949
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44050
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 824
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.231223836493475e-4
allele num: 16244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.081e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.284e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.583e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

DP
type: SiteQuality
SIO_000300: 3.794502e6

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.071e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.94e-1

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44048
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.583511581005928e-5
allele num: 65452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.309e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.286e0

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 8.05e-1

DP
type: SiteQuality
SIO_000300: 3.793205e6

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1823
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44049
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1282
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.098635886673662e-4
allele num: 9530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 4.354e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.08e-1

MQ
type: SiteQuality
SIO_000300: 5.529e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.135e0

MQRankSum
type: SiteQuality
SIO_000300: -1.365e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.219e1

DP
type: SiteQuality
SIO_000300: 3.789243e6

GenotypeQuality
all individuals: 669
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44041
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175088131609871e-4
allele num: 8510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.853e0

MQ
type: SiteQuality
SIO_000300: 5.811e1

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

FS
type: SiteQuality
SIO_000300: 1.676e0

DP
type: SiteQuality
SIO_000300: 3.78546e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.454e0

QD
type: SiteQuality
SIO_000300: 1.594e1

GenotypeQuality
all individuals: 44043
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4896
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.050809741624428e-3
allele num: 16178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

DP
type: SiteQuality
SIO_000300: 3.780172e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.601e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQ
type: SiteQuality
SIO_000300: 5.989e1

GenotypeQuality
all individuals: 130
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4896
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44043
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530502923260583e-5
allele num: 65338
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.601e0

QD
type: SiteQuality
SIO_000300: 1.346e1

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

DP
type: SiteQuality
SIO_000300: 3.780172e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

GenotypeQuality
all individuals: 690
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44031
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2890
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533742331288344e-5
allele num: 65200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.93e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.765449e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.432e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

GenotypeDepth
all individuals: 833
bin: 7.25e1
variant carriers: 11

GenotypeDepth
all individuals: 693
bin: 7.75e1
variant carriers: 11

GenotypeQuality
all individuals: 7918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2709
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5052
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25929
bin: 9.75e1
variant carriers: 163

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 130
allele frequency: 1.957890297900539e-3
allele num: 66398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 31
allele frequency: 4.689863842662632e-3
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.273e0

QD
type: SiteQuality
SIO_000300: 1.265e1

DP
type: SiteQuality
SIO_000300: 2.549768e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

GenotypeDepth
all individuals: 3589
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2052
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2709
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5052
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25929
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 369
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506069459923492e-5
allele num: 66398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.273e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

QD
type: SiteQuality
SIO_000300: 1.265e1

DP
type: SiteQuality
SIO_000300: 2.549768e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

GenotypeDepth
all individuals: 637
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25847
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 560
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.799e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.899e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 2.546884e6

QD
type: SiteQuality
SIO_000300: 1.018e1

VQSLOD
type: SiteQuality
SIO_000300: -9.694e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeDepth
all individuals: 626
bin: 8.25e1
variant carriers: 11

GenotypeDepth
all individuals: 3586
bin: 5.25e1
variant carriers: 20

GenotypeQuality
all individuals: 2322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25907
bin: 9.75e1
variant carriers: 465

GenotypeQuality
all individuals: 359
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3857
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2719
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4284
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.023552088666687e-5
allele num: 66406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.037523776586547e-3
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.24331717021012e-4
allele num: 16086
num of homozygotes: 0

African
type: Population
allele count: 453
allele frequency: 4.43335290663535e-2
allele num: 10218
num of homozygotes: 5

Other
type: Population
allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.22e-2

DP
type: SiteQuality
SIO_000300: 2.549951e6

FS
type: SiteQuality
SIO_000300: 1.387e0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeDepth
all individuals: 7340
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2050
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4284
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25907
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3857
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011776044333343e-5
allele num: 66406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16086
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.22e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

FS
type: SiteQuality
SIO_000300: 1.387e0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 2.549951e6

GenotypeDepth
all individuals: 9085
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 510
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2746
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4331
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25698
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3881
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.778994719342852e-5
allele num: 10226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.234e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.995e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

QD
type: SiteQuality
SIO_000300: 1.445e1

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

DP
type: SiteQuality
SIO_000300: 2.539942e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

GenotypeDepth
all individuals: 827
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 620
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4329
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9558
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25697
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4476
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505525277769414e-5
allele num: 66422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-2

DP
type: SiteQuality
SIO_000300: 2.541141e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.738e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 1.489e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

QD
type: SiteQuality
SIO_000300: 1.004e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

GenotypeDepth
all individuals: 1904
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 620
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4476
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9558
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4329
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25697
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011050555538827e-5
allele num: 66422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.541141e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.738e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

FS
type: SiteQuality
SIO_000300: 1.489e0

QD
type: SiteQuality
SIO_000300: 1.004e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 610
bin: 8.25e1
variant carriers: 16

GenotypeDepth
all individuals: 1554
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 25760
bin: 9.75e1
variant carriers: 432

GenotypeQuality
all individuals: 4363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3890
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5319
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053233426619723e-4
allele num: 66462
num of homozygotes: 0

African
type: Population
allele count: 408
allele frequency: 3.985932004689332e-2
allele num: 10236
num of homozygotes: 8

Latino
type: Population
allele count: 24
allele frequency: 2.075047553173094e-3
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16162
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

FS
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

QD
type: SiteQuality
SIO_000300: 1.327e1

DP
type: SiteQuality
SIO_000300: 2.555365e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-2

GenotypeDepth
all individuals: 8795
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7386
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3912
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4561
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5357
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25539
bin: 9.75e1
variant carriers: 1