17-43893781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893781
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893781
    reference: chr 17
allele count: 4
allele frequency: 3.57890592845767e-5
allele num: 111766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4940C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-48C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-48C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4940C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-48C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11829
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8576
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4447
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

17-43893786-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893786
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893786
    reference: chr 17
allele count: 1
allele frequency: 8.907098957869422e-6
allele num: 112270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4935G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-43G>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-43G>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-43G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4935G>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8557
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4189
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

17-43893788-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893788
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893788
    reference: chr 17
allele count: 3
allele frequency: 2.668279493382667e-5
allele num: 112432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4933C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4933C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-41C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-41C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-41C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6998
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8064
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18106
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-43893791-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893791
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893791
    reference: chr 17
allele count: 1
allele frequency: 8.86037816093991e-6
allele num: 112862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-38A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-38A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4930A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-38A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-38A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-38A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-38A>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-38A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-38A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4930A>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-38A>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

17-43893801-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893801
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893801
    reference: chr 17
allele count: 24
allele frequency: 2.091138799337806e-4
allele num: 114770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4920G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-28G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-28G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-28G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4920G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25431
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12876
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

17-43893810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893810
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893810
    reference: chr 17
allele count: 198
allele frequency: 1.690573770491803e-3
allele num: 117120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-19C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-19C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4911C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-19C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4911C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27535
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14201
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

17-43893814-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893814
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893814
    reference: chr 17
allele count: 3
allele frequency: 2.544615593404356e-5
allele num: 117896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-15C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4907C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-15C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-15C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4907C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14659
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

17-43893815-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893815
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893815
    reference: chr 17
allele count: 20
allele frequency: 1.69296404144376e-4
allele num: 118136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-14G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4906G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-14G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4906G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

17-43893821-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893821
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893822
    reference: chr 17
allele count: 3
allele frequency: 2.525507627033034e-5
allele num: 118788
alternate allele: GC
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-3dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-3dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-3dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-3dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-3dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-3dupC
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-3dupC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-3dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4895dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4895dupC
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-3dupC
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28374
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.536-3dupC
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

17-43893822-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893822
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893822
    reference: chr 17
allele count: 2
allele frequency: 1.68219897049423e-5
allele num: 118892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4899C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.122-7C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-404-7C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-96-7C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.122-7C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.536-7C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4899C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.122-7C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.25-7C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.478-7C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.122-7C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8128
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.536-7C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

17-43893833-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893833
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893833
    reference: chr 17
allele count: 4
allele frequency: 3.342692873378794e-5
allele num: 119664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.29G>A
  hgvsp: ENST00000580955.1:c.29G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-92G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.126G>A
  hgvsp: ENST00000314537.5:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.126G>A
  hgvsp: ENST00000347197.5:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4888G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.482G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.126G>A
  hgvsp: ENST00000398285.3:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4888G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.540G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.126G>A
  hgvsp: ENST00000577353.1:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-400G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu42Leu
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

17-43893836-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893836
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893836
    reference: chr 17
allele count: 1
allele frequency: 8.348081610845828e-6
allele num: 119788
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.129G>A
  hgvsp: ENST00000398285.3:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-397G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.129G>A
  hgvsp: ENST00000347197.5:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4885G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.32G>A
  hgvsp: ENST00000580955.1:c.32G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.129G>A
  hgvsp: ENST00000577353.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.485G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4885G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.129G>A
  hgvsp: ENST00000314537.5:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-89G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.543G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln43Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-43893842-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893842
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893842
    reference: chr 17
allele count: 1
allele frequency: 8.337780149413021e-6
allele num: 119936
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.549C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.135C>T
  hgvsp: ENST00000398285.3:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.135C>T
  hgvsp: ENST00000314537.5:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.135C>T
  hgvsp: ENST00000577353.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.135C>T
  hgvsp: ENST00000347197.5:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-83C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-391C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4879C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.38C>T
  hgvsp: ENST00000580955.1:c.38C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4879C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.491C>T
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn45Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ

17-43893843-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893843
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893843
    reference: chr 17
allele count: 2
allele frequency: 1.66730580055688e-5
allele num: 119954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.136G>A
  hgvsp: ENSP00000239167.7:p.Ala46Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4878G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.136G>A
  hgvsp: ENSP00000462016.1:p.Ala46Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.550G>A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-82G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.492G>A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-390G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.39G>A
  hgvsp: ENSP00000463852.1:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.136G>A
  hgvsp: ENSP00000381333.3:p.Ala46Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.136G>A
  hgvsp: ENSP00000326060.5:p.Ala46Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4878G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16049
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala46Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

17-43893849-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893849
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893849
    reference: chr 17
allele count: 1
allele frequency: 8.329168748958854e-6
allele num: 120060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.45G>A
  hgvsp: ENSP00000463852.1:p.Val16Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4872G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.142G>A
  hgvsp: ENSP00000381333.3:p.Val48Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-384G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000587305
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000587305.1:n.556G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.142G>A
  hgvsp: ENSP00000239167.7:p.Val48Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4872G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-76G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.142G>A
  hgvsp: ENSP00000326060.5:p.Val48Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.142G>A
  hgvsp: ENSP00000462016.1:p.Val48Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.498G>A
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val48Met
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

17-43893859-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893859
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893859
    reference: chr 17
allele count: 1
allele frequency: 8.323622440486099e-6
allele num: 120140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-374T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.55T>C
  hgvsp: ENSP00000463852.1:p.Ile19Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4862T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-66T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.508T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.152T>C
  hgvsp: ENSP00000326060.5:p.Ile51Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.152T>C
  hgvsp: ENSP00000239167.7:p.Ile51Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.152T>C
  hgvsp: ENSP00000381333.3:p.Ile51Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.152T>C
  hgvsp: ENSP00000462016.1:p.Ile51Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4862T>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile51Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

17-43893866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893866
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893866
    reference: chr 17
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.159C>T
  hgvsp: ENST00000314537.5:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.159C>T
  hgvsp: ENST00000577353.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4855C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-59C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4855C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-367C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.62C>T
  hgvsp: ENST00000580955.1:c.62C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.159C>T
  hgvsp: ENST00000398285.3:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.159C>T
  hgvsp: ENST00000347197.5:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.515C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr53Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

17-43893876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893876
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893876
    reference: chr 17
allele count: 2
allele frequency: 1.667695078631823e-5
allele num: 119926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.169C>T
  hgvsp: ENSP00000326060.5:p.Arg57Cys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4845C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.72C>T
  hgvsp: ENSP00000463852.1:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.169C>T
  hgvsp: ENSP00000462016.1:p.Arg57Cys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-357C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-49C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.169C>T
  hgvsp: ENSP00000239167.7:p.Arg57Cys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4845C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.525C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.169C>T
  hgvsp: ENSP00000381333.3:p.Arg57Cys
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16500
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg57Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

17-43893880-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893880
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893880
    reference: chr 17
allele count: 4
allele frequency: 3.33438922325403e-5
allele num: 119962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4841G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.173G>C
  hgvsp: ENSP00000462016.1:p.Ser58Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.173G>C
  hgvsp: ENSP00000326060.5:p.Ser58Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4841G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.173G>C
  hgvsp: ENSP00000381333.3:p.Ser58Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-45G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.529G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.173G>C
  hgvsp: ENSP00000239167.7:p.Ser58Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.76G>C
  hgvsp: ENSP00000463852.1:p.Ser26Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-353G>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser58Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-43893882-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893882
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893882
    reference: chr 17
allele count: 1
allele frequency: 8.333194446759221e-6
allele num: 120002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-351C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.78C>T
  hgvsp: ENSP00000463852.1:p.Pro27Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.175C>T
  hgvsp: ENSP00000239167.7:p.Pro59Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4839C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4839C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.175C>T
  hgvsp: ENSP00000462016.1:p.Pro59Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.531C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-43C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.175C>T
  hgvsp: ENSP00000381333.3:p.Pro59Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.175C>T
  hgvsp: ENSP00000326060.5:p.Pro59Ser
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro59Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

17-43893883-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893883
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893883
    reference: chr 17
allele count: 1
allele frequency: 8.334027835652971e-6
allele num: 119990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.176C>T
  hgvsp: ENSP00000239167.7:p.Pro59Leu
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.79C>T
  hgvsp: ENSP00000463852.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.176C>T
  hgvsp: ENSP00000381333.3:p.Pro59Leu
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4838C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.176C>T
  hgvsp: ENSP00000326060.5:p.Pro59Leu
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.532C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4838C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-350C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.176C>T
  hgvsp: ENSP00000462016.1:p.Pro59Leu
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro59Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-43893884-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893884
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893884
    reference: chr 17
allele count: 381
allele frequency: 3.176270508203281e-3
allele num: 119952
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.177T>C
  hgvsp: ENST00000398285.3:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4837T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.177T>C
  hgvsp: ENST00000577353.1:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.177T>C
  hgvsp: ENST00000347197.5:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.80T>C
  hgvsp: ENST00000580955.1:c.80T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-41T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4837T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.533T>C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-349T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.177T>C
  hgvsp: ENST00000314537.5:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16528
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 26772
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 8694
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 3.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro59Pro
num of homozygotes: 3
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

17-43893886-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893886
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893886
    reference: chr 17
allele count: 863
allele frequency: 7.204033590997879e-3
allele num: 119794
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.179C>T
  hgvsp: ENSP00000381333.3:p.Ala60Val
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.179C>T
  hgvsp: ENSP00000239167.7:p.Ala60Val
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.179C>T
  hgvsp: ENSP00000326060.5:p.Ala60Val
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.82C>T
  hgvsp: ENSP00000463852.1:p.Ala28Val
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4835C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-39C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.179C>T
  hgvsp: ENSP00000462016.1:p.Ala60Val
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4835C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-347C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.535C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 16448
  bin: 2.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 8723
  bin: 3.25e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 26362
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 4577
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5113
  bin: 9.75e1
  variant carriers: 842
hgvs: p.Ala60Val
num of homozygotes: 11
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

17-43893887-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893887
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893887
    reference: chr 17
allele count: 2
allele frequency: 1.664502813009754e-5
allele num: 120156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.83G>A
  hgvsp: ENST00000580955.1:c.83G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.180G>A
  hgvsp: ENST00000398285.3:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.180G>A
  hgvsp: ENST00000347197.5:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.180G>A
  hgvsp: ENST00000577353.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4834G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4834G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.536G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.180G>A
  hgvsp: ENST00000314537.5:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-346G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16632
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala60Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

17-43893901-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893901
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893901
    reference: chr 17
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4820T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.194T>C
  hgvsp: ENSP00000381333.3:p.Val65Ala
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.194T>C
  hgvsp: ENSP00000462016.1:p.Val65Ala
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.194T>C
  hgvsp: ENSP00000326060.5:p.Val65Ala
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.194T>C
  hgvsp: ENSP00000239167.7:p.Val65Ala
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000263715
  ensembl transcript: ENST00000582044
  gene symbol: RP11-105N13.4
  hgvsc: ENST00000582044.1:n.550T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.97T>C
  hgvsp: ENSP00000463852.1:p.Val33Ala
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-332T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4820T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-24T>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val65Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-43893911-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893911
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893911
    reference: chr 17
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4810C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.204C>T
  hgvsp: ENST00000577353.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.204C>T
  hgvsp: ENST00000398285.3:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.204C>T
  hgvsp: ENST00000347197.5:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-14C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.107C>T
  hgvsp: ENST00000580955.1:c.107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4810C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.204C>T
  hgvsp: ENST00000314537.5:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-322C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys68Cys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS

17-43893915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893915
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893915
    reference: chr 17
allele count: 1
allele frequency: 8.309512730173502e-6
allele num: 120344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-10G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4806G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.208G>A
  hgvsp: ENSP00000381333.3:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-318G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.208G>A
  hgvsp: ENSP00000239167.7:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.111G>A
  hgvsp: ENSP00000463852.1:p.Ala38Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4806G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.208G>A
  hgvsp: ENSP00000326060.5:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.208G>A
  hgvsp: ENSP00000462016.1:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17062
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala70Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-43893917-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893917
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893917
    reference: chr 17
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-316C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.210C>G
  hgvsp: ENST00000398285.3:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4804C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-8C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.210C>G
  hgvsp: ENST00000577353.1:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.113C>G
  hgvsp: ENST00000580955.1:c.113C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.210C>G
  hgvsp: ENST00000347197.5:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.210C>G
  hgvsp: ENST00000314537.5:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4804C>G
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala70Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

17-43893917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893917
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893917
    reference: chr 17
allele count: 2
allele frequency: 1.661930165694438e-5
allele num: 120342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.210C>T
  hgvsp: ENST00000577353.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.210C>T
  hgvsp: ENST00000314537.5:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.210C>T
  hgvsp: ENST00000398285.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-8C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.210C>T
  hgvsp: ENST00000347197.5:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4804C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.113C>T
  hgvsp: ENST00000580955.1:c.113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4804C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-316C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala70Ala
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-43893921-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893921
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893921
    reference: chr 17
allele count: 2
allele frequency: 1.661488361274029e-5
allele num: 120374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4800T>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.214T>A
  hgvsp: ENSP00000462016.1:p.Phe72Ile
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-312T>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.117T>A
  hgvsp: ENSP00000463852.1:p.Phe40Ile
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.214T>A
  hgvsp: ENSP00000381333.3:p.Phe72Ile
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.-4T>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.214T>A
  hgvsp: ENSP00000239167.7:p.Phe72Ile
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4800T>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.214T>A
  hgvsp: ENSP00000326060.5:p.Phe72Ile
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe72Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

17-43893934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893934
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893934
    reference: chr 17
allele count: 2
allele frequency: 1.661847309469206e-5
allele num: 120348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4787G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.11G>A
  hgvsp: ENSP00000462553.1:p.Arg4His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.227G>A
  hgvsp: ENSP00000239167.7:p.Arg76His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.130G>A
  hgvsp: ENSP00000463852.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.10G>A
  hgvsp: ENSP00000340522.5:p.Ala4Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.227G>A
  hgvsp: ENSP00000381333.3:p.Arg76His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.227G>A
  hgvsp: ENSP00000462016.1:p.Arg76His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.227G>A
  hgvsp: ENSP00000326060.5:p.Arg76His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-299G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4787G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25885
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8881
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg76His
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

17-43893934-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893934
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893934
    reference: chr 17
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.10G>C
  hgvsp: ENSP00000340522.5:p.Ala4Pro
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.227G>C
  hgvsp: ENSP00000326060.5:p.Arg76Pro
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.11G>C
  hgvsp: ENSP00000462553.1:p.Arg4Pro
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.227G>C
  hgvsp: ENSP00000381333.3:p.Arg76Pro
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-299G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.227G>C
  hgvsp: ENSP00000239167.7:p.Arg76Pro
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4787G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4787G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.130G>C
  hgvsp: ENSP00000463852.1:p.Arg44Pro
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.227G>C
  hgvsp: ENSP00000462016.1:p.Arg76Pro
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg76Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

17-43893959-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893959
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893959
    reference: chr 17
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4762A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4762A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+11A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+11A>G
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-43893969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893969
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893969
    reference: chr 17
allele count: 11
allele frequency: 9.147457006952067e-5
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4752G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4752G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+21G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16831
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24952
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-43893980-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893980
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893980
    reference: chr 17
allele count: 2
allele frequency: 1.664031949413429e-5
allele num: 120190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4741T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+32T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4741T>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

17-43893986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893986
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893986
    reference: chr 17
allele count: 1
allele frequency: 8.323068215867098e-6
allele num: 120148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4735G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+38G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4735G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

17-43893987-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893987
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893987
    reference: chr 17
allele count: 1
allele frequency: 8.326256015719971e-6
allele num: 120102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4734T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+39T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4734T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+39T>G
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

17-43893988-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893988
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893988
    reference: chr 17
allele count: 2
allele frequency: 1.66514028806927e-5
allele num: 120110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4733G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+40G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4733G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23777
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16295
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

17-43893999-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43893999
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43893999
    reference: chr 17
allele count: 1
allele frequency: 8.331944675887353e-6
allele num: 120020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.241+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.25+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-285+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.241+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.144+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-4722G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-4722G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.241+51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.241+51G>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-43898670-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898670
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898670
    reference: chr 17
allele count: 6
allele frequency: 5.02756783026931e-5
allele num: 119342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4722G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-51G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-51G>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4669
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

17-43898675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898675
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898675
    reference: chr 17
allele count: 2
allele frequency: 1.676614579840386e-5
allele num: 119288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-46G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4727G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10120
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

17-43898679-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898679
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898679
    reference: chr 17
allele count: 9
allele frequency: 7.549322238625687e-5
allele num: 119216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4731C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-42C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-42C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-43898679-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898679
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898678
    reference: chr 17
allele count: 1
allele frequency: 8.388135820695209e-6
allele num: 119216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4735delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-38delG
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-38delG
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4637
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: CG
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

17-43898680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898680
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898680
    reference: chr 17
allele count: 1
allele frequency: 8.380965151946898e-6
allele num: 119318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4732G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-41G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-41G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16238
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3873
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/17-43898684-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898684
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898684
    reference: chr 17
allele count: 1
allele frequency: 8.382932349735938e-6
allele num: 119290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4736C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-37C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-37C>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

17-43898690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898690
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898690
    reference: chr 17
allele count: 91
allele frequency: 7.619398486167861e-4
allele num: 119432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4742C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-31C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-31C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14291
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16259
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

17-43898697-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898697
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898697
    reference: chr 17
allele count: 1
allele frequency: 8.368621018628551e-6
allele num: 119494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.242-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.145-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.122-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.242-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-284-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.26-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.242-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4749A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.242-24A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.98-24A>G
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-43898725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898725
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898725
    reference: chr 17
allele count: 1
allele frequency: 8.351846593281774e-6
allele num: 119734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.126T>C
  hgvsp: ENST00000352855.5:c.126T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.102T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.246T>C
  hgvsp: ENST00000314537.5:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.246T>C
  hgvsp: ENST00000577353.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.246T>C
  hgvsp: ENST00000347197.5:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.30T>C
  hgvsp: ENST00000583888.1:c.30T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4777T>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.149T>C
  hgvsp: ENST00000580955.1:c.149T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.246T>C
  hgvsp: ENST00000398285.3:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-280T>C
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn82Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-43898728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898728
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898728
    reference: chr 17
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.33C>T
  hgvsp: ENST00000583888.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.249C>T
  hgvsp: ENST00000577353.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.249C>T
  hgvsp: ENST00000314537.5:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.129C>T
  hgvsp: ENST00000352855.5:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.105C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.249C>T
  hgvsp: ENST00000398285.3:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.249C>T
  hgvsp: ENST00000347197.5:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-277C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4780C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.152C>T
  hgvsp: ENST00000580955.1:c.152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18680
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly83Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/17-43898731-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898731
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898731
    reference: chr 17
allele count: 49
allele frequency: 4.12868000202221e-4
allele num: 118682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.252C>A
  hgvsp: ENSP00000326060.5:p.Tyr84Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.155C>A
  hgvsp: ENSP00000463852.1:p.Tyr52Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-274C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.132C>A
  hgvsp: ENSP00000344068.5:p.Tyr44Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.252C>A
  hgvsp: ENSP00000239167.7:p.Tyr84Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.252C>A
  hgvsp: ENSP00000381333.3:p.Tyr84Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.252C>A
  hgvsp: ENSP00000462016.1:p.Tyr84Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.108C>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.36C>A
  hgvsp: ENSP00000462553.1:p.Tyr12Ter
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4783C>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 10236
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14373
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 8862
  bin: 6.75e1
  variant carriers: 1
hgvs: p.Tyr84Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

17-43898733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898733
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898733
    reference: chr 17
allele count: 1
allele frequency: 8.355056480181806e-6
allele num: 119688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.254G>A
  hgvsp: ENSP00000462016.1:p.Arg85Gln
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.110G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.134G>A
  hgvsp: ENSP00000344068.5:p.Arg45Gln
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-272G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.157G>A
  hgvsp: ENSP00000463852.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.254G>A
  hgvsp: ENSP00000239167.7:p.Arg85Gln
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4785G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.254G>A
  hgvsp: ENSP00000326060.5:p.Arg85Gln
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.38G>A
  hgvsp: ENSP00000462553.1:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.254G>A
  hgvsp: ENSP00000381333.3:p.Arg85Gln
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg85Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

17-43898743-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898743
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898743
    reference: chr 17
allele count: 8
allele frequency: 6.68438027439381e-5
allele num: 119682
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.120G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4795G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.167G>C
  hgvsp: ENST00000580955.1:c.167G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.264G>C
  hgvsp: ENST00000398285.3:c.264G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.144G>C
  hgvsp: ENST00000352855.5:c.144G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.264G>C
  hgvsp: ENST00000577353.1:c.264G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-262G>C
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.264G>C
  hgvsp: ENST00000347197.5:c.264G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.48G>C
  hgvsp: ENST00000583888.1:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.264G>C
  hgvsp: ENST00000314537.5:c.264G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu88Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-43898744-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898744
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898744
    reference: chr 17
allele count: 1
allele frequency: 8.355754608198667e-6
allele num: 119678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.49G>A
  hgvsp: ENSP00000462553.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.121G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.265G>A
  hgvsp: ENSP00000326060.5:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.265G>A
  hgvsp: ENSP00000462016.1:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4796G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.145G>A
  hgvsp: ENSP00000344068.5:p.Ala49Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.265G>A
  hgvsp: ENSP00000239167.7:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-261G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.168G>A
  hgvsp: ENSP00000463852.1:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.265G>A
  hgvsp: ENSP00000381333.3:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala89Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-43898748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898748
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898748
    reference: chr 17
allele count: 1
allele frequency: 8.355614973262032e-6
allele num: 119680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.269A>G
  hgvsp: ENSP00000326060.5:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-257A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.269A>G
  hgvsp: ENSP00000239167.7:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.149A>G
  hgvsp: ENSP00000344068.5:p.Asn50Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.172A>G
  hgvsp: ENSP00000463852.1:p.Asn58Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.125A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.53A>G
  hgvsp: ENSP00000462553.1:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.269A>G
  hgvsp: ENSP00000462016.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4800A>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.269A>G
  hgvsp: ENSP00000381333.3:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4671
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn90Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

17-43898762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898762
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898762
    reference: chr 17
allele count: 5
allele frequency: 4.181511030826099e-5
allele num: 119574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.283G>A
  hgvsp: ENSP00000462016.1:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.283G>A
  hgvsp: ENSP00000239167.7:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.283G>A
  hgvsp: ENSP00000326060.5:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.139G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-243G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.186G>A
  hgvsp: ENSP00000463852.1:p.Ala63Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.163G>A
  hgvsp: ENSP00000344068.5:p.Ala55Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.283G>A
  hgvsp: ENSP00000381333.3:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4814G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.67G>A
  hgvsp: ENSP00000462553.1:p.Ala23Thr
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala95Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

17-43898766-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898766
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898766
    reference: chr 17
allele count: 2
allele frequency: 1.672912205567452e-5
allele num: 119552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.287G>A
  hgvsp: ENSP00000326060.5:p.Arg96His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.167G>A
  hgvsp: ENSP00000344068.5:p.Arg56His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.287G>A
  hgvsp: ENSP00000239167.7:p.Arg96His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.143G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4818G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.190G>A
  hgvsp: ENSP00000463852.1:p.Arg64His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.287G>A
  hgvsp: ENSP00000381333.3:p.Arg96His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.71G>A
  hgvsp: ENSP00000462553.1:p.Arg24His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.287G>A
  hgvsp: ENSP00000462016.1:p.Arg96His
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-239G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19277
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg96His
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

17-43898767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898767
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898767
    reference: chr 17
allele count: 1
allele frequency: 8.36470096194061e-6
allele num: 119550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.191C>T
  hgvsp: ENST00000580955.1:c.191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.288C>T
  hgvsp: ENST00000314537.5:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4819C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.288C>T
  hgvsp: ENST00000577353.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.288C>T
  hgvsp: ENST00000347197.5:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-238C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.288C>T
  hgvsp: ENST00000398285.3:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.144C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.72C>T
  hgvsp: ENST00000583888.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.168C>T
  hgvsp: ENST00000352855.5:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5699
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg96Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

17-43898768-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898768
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898768
    reference: chr 17
allele count: 2
allele frequency: 1.67319211591875e-5
allele num: 119532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.289G>A
  hgvsp: ENSP00000239167.7:p.Val97Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.169G>A
  hgvsp: ENSP00000344068.5:p.Val57Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.289G>A
  hgvsp: ENSP00000462016.1:p.Val97Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.289G>A
  hgvsp: ENSP00000326060.5:p.Val97Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.289G>A
  hgvsp: ENSP00000381333.3:p.Val97Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.192G>A
  hgvsp: ENSP00000463852.1:p.Val65Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.73G>A
  hgvsp: ENSP00000462553.1:p.Val25Met
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-237G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4820G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.145G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val97Met
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

17-43898779-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898779
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898779
    reference: chr 17
allele count: 12
allele frequency: 1.004469891015017e-4
allele num: 119466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.300C>T
  hgvsp: ENST00000347197.5:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-226C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.84C>T
  hgvsp: ENST00000583888.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.203C>T
  hgvsp: ENST00000580955.1:c.203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.300C>T
  hgvsp: ENST00000398285.3:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.300C>T
  hgvsp: ENST00000314537.5:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4831C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.180C>T
  hgvsp: ENST00000352855.5:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.156C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.300C>T
  hgvsp: ENST00000577353.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10135
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser100Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

17-43898780-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898780
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898780
    reference: chr 17
allele count: 2
allele frequency: 1.675013818864006e-5
allele num: 119402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.204G>A
  hgvsp: ENSP00000463852.1:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4832G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.301G>A
  hgvsp: ENSP00000462016.1:p.Glu101Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.85G>A
  hgvsp: ENSP00000462553.1:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.157G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.301G>A
  hgvsp: ENSP00000381333.3:p.Glu101Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.181G>A
  hgvsp: ENSP00000344068.5:p.Glu61Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.301G>A
  hgvsp: ENSP00000326060.5:p.Glu101Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-225G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.301G>A
  hgvsp: ENSP00000239167.7:p.Glu101Lys
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu101Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-43898788-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898788
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898788
    reference: chr 17
allele count: 2
allele frequency: 1.67627732332037e-5
allele num: 119312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.309G>A
  hgvsp: ENST00000314537.5:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.309G>A
  hgvsp: ENST00000398285.3:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.93G>A
  hgvsp: ENST00000583888.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.309G>A
  hgvsp: ENST00000577353.1:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.309G>A
  hgvsp: ENST00000347197.5:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4840G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.189G>A
  hgvsp: ENST00000352855.5:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.165G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.212G>A
  hgvsp: ENST00000580955.1:c.212G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-217G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11040
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gln103Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

17-43898791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898791
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898791
    reference: chr 17
allele count: 14
allele frequency: 1.174220820612608e-4
allele num: 119228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4843G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.192G>A
  hgvsp: ENST00000352855.5:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-214G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.312G>A
  hgvsp: ENST00000314537.5:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.312G>A
  hgvsp: ENST00000577353.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.215G>A
  hgvsp: ENST00000580955.1:c.215G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.312G>A
  hgvsp: ENST00000347197.5:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.312G>A
  hgvsp: ENST00000398285.3:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.96G>A
  hgvsp: ENST00000583888.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.168G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16347
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu104Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

17-43898795-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898795
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898795
    reference: chr 17
allele count: 1
allele frequency: 8.390528771123156e-6
allele num: 119182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.196C>T
  hgvsp: ENSP00000344068.5:p.Leu66Phe
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.100C>T
  hgvsp: ENSP00000462553.1:p.Leu34Phe
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4847C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.219C>T
  hgvsp: ENSP00000463852.1:p.Leu74Phe
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.316C>T
  hgvsp: ENSP00000326060.5:p.Leu106Phe
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.316C>T
  hgvsp: ENSP00000381333.3:p.Leu106Phe
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-210C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.316C>T
  hgvsp: ENSP00000239167.7:p.Leu106Phe
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.172C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.316C>T
  hgvsp: ENSP00000462016.1:p.Leu106Phe
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu106Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

17-43898800-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898800
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898800
    reference: chr 17
allele count: 1
allele frequency: 8.400819920024195e-6
allele num: 119036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.321T>G
  hgvsp: ENSP00000326060.5:p.Asn107Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.201T>G
  hgvsp: ENSP00000344068.5:p.Asn67Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.321T>G
  hgvsp: ENSP00000381333.3:p.Asn107Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-205T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.321T>G
  hgvsp: ENSP00000239167.7:p.Asn107Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.321T>G
  hgvsp: ENSP00000462016.1:p.Asn107Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.224T>G
  hgvsp: ENSP00000463852.1:p.Asn75Lys
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4852T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.177T>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.105T>G
  hgvsp: ENSP00000462553.1:p.Asn35Lys
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn107Lys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD

17-43898819-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898819
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898819
    reference: chr 17
allele count: 4
allele frequency: 3.373932993690746e-5
allele num: 118556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.327+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-199+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.327+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.111+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4871C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.327+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.327+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.230+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.183+13C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.207+13C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

17-43898820-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898820
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898820
    reference: chr 17
allele count: 2
allele frequency: 1.688504660272862e-5
allele num: 118448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4872G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-199+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.327+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.207+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.183+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.327+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.327+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.111+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.230+14G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.327+14G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8739
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

17-43898827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898827
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898827
    reference: chr 17
allele count: 1
allele frequency: 8.452370890034655e-6
allele num: 118310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-199+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.230+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.327+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.183+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.327+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.327+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.111+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.327+21G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4879G>A
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.207+21G>A
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

17-43898828-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898828
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898828
    reference: chr 17
allele count: 1
allele frequency: 8.457231778894133e-6
allele num: 118242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.207+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.327+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.327+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.327+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.230+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.111+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.327+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.183+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-199+22C>G
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4880C>G
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13728
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

17-43898833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43898833
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43898833
    reference: chr 17
allele count: 1
allele frequency: 8.470556346140815e-6
allele num: 118056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000239167
  ensembl transcript: ENST00000347197
  gene symbol: CRHR1
  hgvsc: ENST00000347197.5:c.327+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl transcript: ENST00000582766
  gene symbol: CRHR1
  hgvsc: ENST00000582766.1:n.183+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000293493
  ensembl transcript: ENST00000293493
  gene symbol: CRHR1
  hgvsc: ENST00000293493.7:c.-199+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000381333
  ensembl transcript: ENST00000398285
  gene symbol: CRHR1
  hgvsc: ENST00000398285.3:c.327+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000340522
  ensembl transcript: ENST00000339069
  gene symbol: CRHR1
  hgvsc: ENST00000339069.5:c.24+4885C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462553
  ensembl transcript: ENST00000583888
  gene symbol: CRHR1
  hgvsc: ENST00000583888.1:c.111+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000462016
  ensembl transcript: ENST00000577353
  gene symbol: CRHR1
  hgvsc: ENST00000577353.1:c.327+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000463852
  ensembl transcript: ENST00000580955
  gene symbol: CRHR1
  hgvsc: ENST00000580955.1:c.230+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000326060
  ensembl transcript: ENST00000314537
  gene symbol: CRHR1
  hgvsc: ENST00000314537.5:c.327+27C>T
  variant of: http://identifiers.org/hgnc/2357
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000120088
  ensembl protein: ENSP00000344068
  ensembl transcript: ENST00000352855
  gene symbol: CRHR1
  hgvsc: ENST00000352855.5:c.207+27C>T
  variant of: http://identifiers.org/hgnc/2357
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 176
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4055
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 795
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4343
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3961
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11725
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.266211604095563e-4
allele num: 9376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.183e1

MQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

MQ
type: SiteQuality
SIO_000300: 5.504e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.451e0

FS
type: SiteQuality
SIO_000300: 5.883e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.37e0

DP
type: SiteQuality
SIO_000300: 1.357719e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.505e0

GenotypeQuality
all individuals: 6145
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3671
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4021
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2783
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.639989504067174e-5
allele num: 60976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6106
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.898e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 2.963e0

MQRankSum
type: SiteQuality
SIO_000300: 6.74e-1

QD
type: SiteQuality
SIO_000300: 1.577e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 1.381979e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
all individuals: 2058
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2489
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17755
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 218
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3738
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2693
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6312
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2838
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4073
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1480
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15380
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.130833155763904e-4
allele num: 9386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.635750973271829e-5
allele num: 61134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.62e1

FS
type: SiteQuality
SIO_000300: 6.229e0

MQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

DP
type: SiteQuality
SIO_000300: 1.397509e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.632e0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

GenotypeQuality
all individuals: 4098
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20416
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.629195177582274e-5
allele num: 61380
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

FS
type: SiteQuality
SIO_000300: 1.6e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

DP
type: SiteQuality
SIO_000300: 1.424503e6

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

GenotypeQuality
all individuals: 377
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4141
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 3211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25796
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7231
bin: 6.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591191165706648e-5
allele num: 62846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11196
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.470588235294118e-3
allele num: 15640
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e0

DP
type: SiteQuality
SIO_000300: 1.493523e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2922
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29002
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 9.75e1
variant carriers: 197

GenotypeQuality
all individuals: 4210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7868
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.527959075674722e-4
allele num: 11338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 191
allele frequency: 1.986686082795923e-2
allele num: 9614
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.097605550909147e-5
allele num: 64566
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.551613e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

FS
type: SiteQuality
SIO_000300: 1.195e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

GenotypeQuality
all individuals: 8091
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.609711124769515e-5
allele num: 65080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.567117e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

FS
type: SiteQuality
SIO_000300: 4.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

GenotypeQuality
all individuals: 1680
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8145
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
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GenotypeQuality
all individuals: 1538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4206
bin: 9.75e1
variant carriers: 20

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.066261920093214e-5
allele num: 65226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.86181216383947e-3
allele num: 9668
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.572693e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.191e1

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 34
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4204
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8311
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variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.571358912626093e-5
allele num: 65626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.248e0

QD
type: SiteQuality
SIO_000300: 1.245e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.586676e6

FS
type: SiteQuality
SIO_000300: 9.669e0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

GenotypeDepth
all individuals: 34
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3048
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
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variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
all individuals: 3706
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variant carriers: 0

GenotypeQuality
all individuals: 4207
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8347
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30643
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.233501911927963e-4
allele num: 16214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65702
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.589378e6

FS
type: SiteQuality
SIO_000300: 5.385e0

VQSLOD
type: SiteQuality
SIO_000300: -4.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.771e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.115e0

QD
type: SiteQuality
SIO_000300: 1.314e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
all individuals: 199
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
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variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31091
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variant carriers: 0

GenotypeQuality
all individuals: 3114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
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variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4233
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.642525533890436e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

DP
type: SiteQuality
SIO_000300: 1.605087e6

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

QD
type: SiteQuality
SIO_000300: 1.489e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 8615
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 1723
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4234
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510847887834653e-5
allele num: 66188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.607446e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

FS
type: SiteQuality
SIO_000300: 2.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.292e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.59e-1

GenotypeQuality
all individuals: 3863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
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variant carriers: 1

GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 599
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.75e1
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GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
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GenotypeQuality
all individuals: 90
bin: 7.5e0
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GenotypeQuality
all individuals: 4628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.891e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.61e-1

DP
type: SiteQuality
SIO_000300: 1.611173e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: -2.8e0

QD
type: SiteQuality
SIO_000300: 1.258e1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQ
type: SiteQuality
SIO_000300: 5.834e1

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 3124
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 4622
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.50879628232596e-5
allele num: 66278
num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -2.22e-1

QD
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MQRankSum
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SIO_000300: -9.0e-2

BaseQRankSum
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SIO_000300: -4.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.48e-1

FS
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

DP
type: SiteQuality
SIO_000300: 1.612226e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

East Asian
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allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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SIO_000300: 1.91e0

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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DP
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QD
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FS
type: SiteQuality
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MQ
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SIO_000300: 5.851e1

ReadPosRankSum
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BaseQRankSum
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SIO_000300: 1.08e0

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
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African
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allele count: 1
allele frequency: 1.023751023751024e-4
allele num: 9768
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

BaseQRankSum
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FS
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SIO_000300: 0.0e0

VQSLOD
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DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 4.0e-4

ReadPosRankSum
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QD
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SIO_000300: 1.39e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.324e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 8.550000000000001e0

FS
type: SiteQuality
SIO_000300: 2.069e0

DP
type: SiteQuality
SIO_000300: 1.615404e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.028171910343409e-4
allele num: 9726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66170
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.616164e6

MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.2534e1

InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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South Asian
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African
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num of homozygotes: 0

Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.042296072507553e-5
allele num: 66200
num of homozygotes: 0

MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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East Asian
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allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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BaseQRankSum
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MQRankSum
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DP
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MQ
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66220
num of homozygotes: 0

Other
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South Asian
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allele frequency: 6.064281382656155e-5
allele num: 16490
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.617242e6

InbreedingCoeff
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MQRankSum
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FS
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SIO_000300: 4.36e0

QD
type: SiteQuality
SIO_000300: 1.263e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 8603
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4610
bin: 9.75e1
variant carriers: 378

GenotypeQuality
all individuals: 30039
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.300052002080083e-3
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 342
allele frequency: 3.517794692450113e-2
allele num: 9722
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.324066239574519e-4
allele num: 66184
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.98e-2

DP
type: SiteQuality
SIO_000300: 1.627274e6

VQSLOD
type: SiteQuality
SIO_000300: -7.013e-1

FS
type: SiteQuality
SIO_000300: 1.108e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

MQ
type: SiteQuality
SIO_000300: 5.813e1

QD
type: SiteQuality
SIO_000300: 1.369e1

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 29653
bin: 6.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 775
allele frequency: 1.173246941988616e-2
allele num: 66056
num of homozygotes: 11

Other
type: Population
allele count: 6
allele frequency: 6.772009029345372e-3
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.15221346270467e-3
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.0631318341242e-3
allele num: 9694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 28
allele frequency: 4.298434141848327e-3
allele num: 6514
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.300052002080083e-3
allele num: 11538
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

DP
type: SiteQuality
SIO_000300: 1.641416e6

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 1.789e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

GenotypeQuality
all individuals: 165
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29989
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4579
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507249871883761e-5
allele num: 66346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.369e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

FS
type: SiteQuality
SIO_000300: 1.034e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

DP
type: SiteQuality
SIO_000300: 1.635822e6

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8771
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30116
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4591
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66438
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

FS
type: SiteQuality
SIO_000300: 4.887e0

QD
type: SiteQuality
SIO_000300: 1.207e1

DP
type: SiteQuality
SIO_000300: 1.639336e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.021e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.606e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4599
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4773
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30339
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.023541453428864e-4
allele num: 9770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 1.643948e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

FS
type: SiteQuality
SIO_000300: 2.508e0

GenotypeQuality
all individuals: 4600
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3211
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.164e1

FS
type: SiteQuality
SIO_000300: 2.796e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.818e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.645395e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8836
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.305e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.97e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.646823e6

QD
type: SiteQuality
SIO_000300: 1.143e1

FS
type: SiteQuality
SIO_000300: 1.101e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8836
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4602
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30304
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00815209216978e-5
allele num: 66486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.101e0

MQRankSum
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SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 1.143e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.305e0

DP
type: SiteQuality
SIO_000300: 1.646823e6

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00724746639401e-5
allele num: 66506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.647022e6

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 3.88e-1

MQ
type: SiteQuality
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MQRankSum
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SIO_000300: 7.38e-1

BaseQRankSum
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SIO_000300: -3.49e-1

InbreedingCoeff
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SIO_000300: 8.699999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e0

ClippingRankSum
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SIO_000300: -8.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 1.68e0

QD
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MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
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SIO_000300: 3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

DP
type: SiteQuality
SIO_000300: 1.649419e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

FS
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
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SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

DP
type: SiteQuality
SIO_000300: 1.649419e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66460
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.643262e6

FS
type: SiteQuality
SIO_000300: 3.839e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
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SIO_000300: 1.03e0

ReadPosRankSum
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SIO_000300: 1.62e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
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allele count: 11
allele frequency: 1.126126126126126e-3
allele num: 9768
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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QD
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MQRankSum
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FS
type: SiteQuality
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DP
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 9.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.012138919846983e-5
allele num: 66398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ClippingRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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FS
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QD
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DP
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ReadPosRankSum
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MQRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Latino
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African
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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QD
type: SiteQuality
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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Latino
type: Population
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African
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East Asian
type: Population
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allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
type: SiteQuality
SIO_000300: 2.603e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.389e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.925e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
SIO_000300: 1.626663e6

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012864933265042e-5
allele num: 66382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

FS
type: SiteQuality
SIO_000300: 4.832e0

QD
type: SiteQuality
SIO_000300: 1.263e1

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.362e0

DP
type: SiteQuality
SIO_000300: 1.627135e6

GenotypeQuality
all individuals: 679
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1810
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variant carriers: 0

GenotypeQuality
all individuals: 8270
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507431637975218e-5
allele num: 66338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.77e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

VQSLOD
type: SiteQuality
SIO_000300: 8.37e-1

FS
type: SiteQuality
SIO_000300: 1.089e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.632944e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 8850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11336
bin: 9.75e1
variant carriers: 6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.198405822214521e-4
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.382e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

DP
type: SiteQuality
SIO_000300: 2.074977e6

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
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variant carriers: 0

GenotypeQuality
all individuals: 330
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8832
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21256214380987e-4
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 9.163e0

VQSLOD
type: SiteQuality
SIO_000300: -1.102e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.07503e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.204e1

GenotypeQuality
all individuals: 2082
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 141
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11320
bin: 9.75e1
variant carriers: 9

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.045587620242576e-4
allele num: 9564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.545454545454545e-4
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.048315805517451e-5
allele num: 65610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.075869e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

QD
type: SiteQuality
SIO_000300: 1.335e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.551e0

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

GenotypeQuality
all individuals: 317
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524157902758726e-5
allele num: 65610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 2.075869e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.551e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

QD
type: SiteQuality
SIO_000300: 1.335e1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65688
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.077786e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

FS
type: SiteQuality
SIO_000300: 8.31e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

GenotypeQuality
all individuals: 3870
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2084
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GenotypeQuality
all individuals: 100
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17343346632246e-4
allele num: 8522
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.07802e6

MQ
type: SiteQuality
SIO_000300: 5.884e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.186e0

QD
type: SiteQuality
SIO_000300: 1.491e1

VQSLOD
type: SiteQuality
SIO_000300: -1.024e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.542e0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8934
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11330
bin: 9.75e1
variant carriers: 91

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.693733865289838e-4
allele num: 8522
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.931207762952695e-4
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 41
allele frequency: 4.262840507381992e-3
allele num: 9618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.026634382566586e-4
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 5.475118627570264e-4
allele num: 65752
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

DP
type: SiteQuality
SIO_000300: 2.085769e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.278e0

FS
type: SiteQuality
SIO_000300: 6.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 18743
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
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variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 170
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 11261
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variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8970
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5699
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4663
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

MQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

FS
type: SiteQuality
SIO_000300: 2.9155e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.82e-1

DP
type: SiteQuality
SIO_000300: 2.085926e6

QD
type: SiteQuality
SIO_000300: 1.098e1

MQ
type: SiteQuality
SIO_000300: 4.824e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

GenotypeQuality
all individuals: 11271
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 2095
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 5714
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variant carriers: 0

GenotypeQuality
all individuals: 3353
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variant carriers: 0

GenotypeQuality
all individuals: 4674
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
all individuals: 8995
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.034126163391934e-4
allele num: 9670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.423e0

FS
type: SiteQuality
SIO_000300: 3.107e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

DP
type: SiteQuality
SIO_000300: 2.092904e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.338e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3353
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11270
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515840533575868e-5
allele num: 65970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e-1

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.037e0

DP
type: SiteQuality
SIO_000300: 2.093965e6

MQ
type: SiteQuality
SIO_000300: 5.914e1

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3870
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4643
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 341
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 179
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variant carriers: 1

GenotypeQuality
all individuals: 695
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 114
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variant carriers: 4

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 205
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variant carriers: 12

GenotypeQuality
all individuals: 3316
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2085
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18403
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5668
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10972
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.202117567857034e-4
allele num: 65358
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.343835906111228e-4
allele num: 9458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.604618857440528e-4
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.732755954222085e-4
allele num: 6466
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.574e0

VQSLOD
type: SiteQuality
SIO_000300: -5.206e1

QD
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 1.01131e2

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 2.105464e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.258e0

GenotypeQuality
all individuals: 5716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 11070
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variant carriers: 1

GenotypeQuality
all individuals: 8999
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 85
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GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 187
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 2094
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variant carriers: 0

GenotypeQuality
all individuals: 18903
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variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
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variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515702679762338e-5
allele num: 65976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.079158e6

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.73e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

QD
type: SiteQuality
SIO_000300: 9.58e0

GenotypeQuality
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 69
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 158
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GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 3921
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GenotypeQuality
all individuals: 154
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GenotypeQuality
all individuals: 19128
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GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 11066
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variant carriers: 8

GenotypeQuality
all individuals: 3335
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GenotypeQuality
all individuals: 5714
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variant carriers: 0

GenotypeQuality
all individuals: 4674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9018
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.062626936251477e-5
allele num: 65978
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.079216e6

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.411e0

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

QD
type: SiteQuality
SIO_000300: 1.144e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 116
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 8990
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5712
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variant carriers: 0

GenotypeQuality
all individuals: 168
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GenotypeQuality
all individuals: 2094
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 3919
bin: 7.25e1
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GenotypeQuality
all individuals: 87
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.17343346632246e-4
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65978
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.122e0

MQRankSum
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SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 2.078435e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.635e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515564851019975e-5
allele num: 65982
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
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MQ
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QD
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ReadPosRankSum
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SIO_000300: 2.73e-1

BaseQRankSum
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SIO_000300: 3.88e0

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.078394e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033796492931254e-5
allele num: 65924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.039717196922437e-4
allele num: 9618
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.78e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQ
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SIO_000300: 5.946e1

DP
type: SiteQuality
SIO_000300: 2.077103e6

MQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.364e0

FS
type: SiteQuality
SIO_000300: 3.877e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.421e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034164694459615e-5
allele num: 65916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

FS
type: SiteQuality
SIO_000300: 8.247999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 2.076723e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

QD
type: SiteQuality
SIO_000300: 1.422e1

GenotypeQuality
all individuals: 19305
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 2.076416e6

VQSLOD
type: SiteQuality
SIO_000300: 6.98e-1

ReadPosRankSum
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ClippingRankSum
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.039068994181214e-4
allele num: 9624
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8500
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
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FS
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MQRankSum
type: SiteQuality
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VQSLOD
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MQ
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SIO_000300: 5.923e1

DP
type: SiteQuality
SIO_000300: 2.076328e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.082899395959175e-4
allele num: 9602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.366410591200316e-4
allele num: 65866
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

Other
type: Population
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South Asian
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allele frequency: 0.0e0
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East Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.89e-1

DP
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SIO_000300: 2.075548e6

ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.174e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
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allele num: 8494
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65826
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.735207357279195e-4
allele num: 11526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: -6.65e-1

BaseQRankSum
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FS
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VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

DP
type: SiteQuality
SIO_000300: 2.074331e6

GenotypeQuality
all individuals: 942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4659
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 2088
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5680
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8949
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65772
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.811e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.414e0

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.29e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.073018e6

GenotypeQuality
all individuals: 3334
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5678
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.359263906315349e-3
allele num: 9564
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.278e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.011e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 2.071638e6

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4659
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65690
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.774e0

FS
type: SiteQuality
SIO_000300: 9.243e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.385e0

QD
type: SiteQuality
SIO_000300: 1.464e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: -3.887e-1

DP
type: SiteQuality
SIO_000300: 2.070191e6

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
all individuals: 11030
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3876
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variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 2.066663e6

MQ
type: SiteQuality
SIO_000300: 5.89e1

FS
type: SiteQuality
SIO_000300: 1.0348e1

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

GenotypeQuality
all individuals: 2084
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17700
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.23728813559322e-4
allele num: 9440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

DP
type: SiteQuality
SIO_000300: 2.050111e6

FS
type: SiteQuality
SIO_000300: 2.728e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11014
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213886865744113e-4
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.077e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

DP
type: SiteQuality
SIO_000300: 2.046627e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536381514257621e-5
allele num: 65088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.912e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 2.037268e6

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.26e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537326282130119e-5
allele num: 65048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.831e0

QD
type: SiteQuality
SIO_000300: 6.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 2.034612e6

FS
type: SiteQuality
SIO_000300: 1.648e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.77e-1