22-50686245-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686245
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686245
    reference: chr 22
allele count: 33
allele frequency: 2.764837963738731e-4
allele num: 119356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+74C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+74C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*859-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1278-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1416-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.561C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5610-40C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.767-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1188-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.973-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+74C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1354-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.60-40C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+74C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1338-40C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26211
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/22-50686247-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686247
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686247
    reference: chr 22
allele count: 3
allele frequency: 2.513868172753021e-5
allele num: 119338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5610-42G>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.767-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.60-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+72G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1338-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+72G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*859-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1278-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.559G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.973-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+72G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1416-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1188-42G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+72G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1354-42G>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50686247-C-CCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686247
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686249
    reference: chr 22
allele count: 1
allele frequency: 8.379560575843403e-6
allele num: 119338
alternate allele: CCG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1338-44_1338-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+70_404+71dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*859-44_*859-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.557_558dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1188-44_1188-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1354-44_1354-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+70_1187+71dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1416-44_1416-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.60-44_60-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.973-44_973-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.767-44_767-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+70_*606+71dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5610-44_5610-43dupCG
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1278-44_1278-43dupCG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+70_731+71dupCG
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26147
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

22-50686249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686249
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686249
    reference: chr 22
allele count: 10
allele frequency: 8.382791804982732e-5
allele num: 119292
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1338-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5610-44C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.767-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+70C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.973-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1416-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.557C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+70C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.60-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+70C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1188-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1278-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+70C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*859-44C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1354-44C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

22-50686249-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686249
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686249
    reference: chr 22
allele count: 1
allele frequency: 8.382791804982731e-6
allele num: 119292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+70C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.60-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*859-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1354-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1278-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1416-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5610-44C>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.973-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+70C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1188-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.557C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+70C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1338-44C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+70C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.767-44C>A
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26089
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

22-50686260-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686260
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686260
    reference: chr 22
allele count: 3
allele frequency: 2.516187472741302e-5
allele num: 119228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+59T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1338-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1278-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.767-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+59T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.973-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.546T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+59T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1188-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.60-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*859-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+59T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1354-55T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5610-55T>C
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1416-55T>C
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25905
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11960
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

22-50686262-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686262
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686262
    reference: chr 22
allele count: 1
allele frequency: 8.387291575804341e-6
allele num: 119228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+57T>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.544T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+57T>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+57T>A
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25925
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/22-50686269-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686269
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686269
    reference: chr 22
allele count: 2
allele frequency: 1.678612794386719e-5
allele num: 119146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+50G>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.537G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+50G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+50G>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

22-50686269-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686269
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686269
    reference: chr 22
allele count: 1
allele frequency: 8.393063971933595e-6
allele num: 119146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+50G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.537G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+50G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+50G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-50686270-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686270
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686270
    reference: chr 22
allele count: 1
allele frequency: 8.39390937935434e-6
allele num: 119134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.536T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+49T>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+49T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+49T>G
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS

22-50686274-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686274
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686274
    reference: chr 22
allele count: 2
allele frequency: 1.679712433231431e-5
allele num: 119068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+45C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.532C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+45C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+45C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

22-50686276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686276
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686276
    reference: chr 22
allele count: 1
allele frequency: 8.399549784131571e-6
allele num: 119054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.530C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+43C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+43C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+43C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

22-50686277-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686277
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686277
    reference: chr 22
allele count: 1
allele frequency: 8.400255367763179e-6
allele num: 119044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+42A>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.529A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+42A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+42A>G
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

22-50686283-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686283
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686283
    reference: chr 22
allele count: 6
allele frequency: 5.046087600080738e-5
allele num: 118904
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.523G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+36G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+36G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+36G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25246
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS

22-50686284-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686284
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686284
    reference: chr 22
allele count: 50
allele frequency: 4.202952153592683e-4
allele num: 118964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.522C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+35C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+35C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+35C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11594
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25305
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-50686287-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686287
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686287
    reference: chr 22
allele count: 1
allele frequency: 8.40745909771149e-6
allele num: 118942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+32G>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.519G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+32G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+32G>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-50686292-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686292
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686289
    reference: chr 22
allele count: 5
allele frequency: 4.204860819106888e-5
allele num: 118910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+24_766+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+24_972+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+24_59+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+24_*858+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+24_5609+26delAAG
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+24_1277+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+24_1337+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+24_1415+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.511_513delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+24_1187+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+24_731+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+24_1353+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+24_*606+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+24_1187+26delAAG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+24_404+26delAAG
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: CCTT
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

22-50686293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686293
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686293
    reference: chr 22
allele count: 1
allele frequency: 8.414675193537529e-6
allele num: 118840
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+26G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.513G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+26G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+26G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11428
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

22-50686299-CCCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686299
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686295
    reference: chr 22
allele count: 1
allele frequency: 8.417225009258947e-6
allele num: 118804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+16_1353+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+16_731+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+16_404+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+16_59+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+16_1187+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+16_*858+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+16_1277+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.503_506delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+16_972+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+16_1337+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+16_5609+19delCTGG
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+16_1415+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+16_1187+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+16_*606+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+16_766+19delCTGG
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: CCCAG
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD

22-50686307-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686307
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686307
    reference: chr 22
allele count: 2
allele frequency: 1.684323996563979e-5
allele num: 118742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+12T>C
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+12T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.499T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+12T>C
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12351
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11206
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-50686308-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686308
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686308
    reference: chr 22
allele count: 2
allele frequency: 1.684721262867059e-5
allele num: 118714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+11C>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.498C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+11C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+11C>G
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/22-50686309-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686309
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686309
    reference: chr 22
allele count: 1
allele frequency: 8.427865895797866e-6
allele num: 118654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+10G>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.497G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+10G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+10G>T
  variant of: http://identifiers.org/hgnc/18128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

22-50686313-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686313
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686313
    reference: chr 22
allele count: 2
allele frequency: 1.687051876845213e-5
allele num: 118550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*858+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1337+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.493C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1277+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.404+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.972+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1353+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1187+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.59+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.731+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1187+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1415+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5609+6C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.766+6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*606+6C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.1337+6C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

22-50686329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686329
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686329
    reference: chr 22
allele count: 2
allele frequency: 1.68784917379783e-5
allele num: 118494
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*596G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1405G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.49G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1177G>A
  hgvsp: ENSP00000397542.1:p.Ala393Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5599G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1327G>A
  hgvsp: ENSP00000216271.5:p.Ala443Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1177G>A
  hgvsp: ENSP00000406150.1:p.Ala393Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.477G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1267G>A
  hgvsp: ENSP00000343540.4:p.Ala423Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.756G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1343G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.721G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*848G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.394G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.962G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala443Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

22-50686333-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686333
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686333
    reference: chr 22
allele count: 74
allele frequency: 6.244304181996152e-4
allele num: 118508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1401A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.717A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1339A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*592A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1173A>C
  hgvsp: ENST00000448072.1:c.1173A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*844A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5595A>C
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.752A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1263A>C
  hgvsp: ENST00000349505.4:c.1263A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1323A>C
  hgvsp: ENST00000216271.5:c.1323A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1173A>C
  hgvsp: ENST00000454936.1:c.1173A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.473A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.958A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.390A>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.45A>C
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr441Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

22-50686341-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686341
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686341
    reference: chr 22
allele count: 1
allele frequency: 8.439245868989148e-6
allele num: 118494
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*584G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.382G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1165G>A
  hgvsp: ENSP00000397542.1:p.Glu389Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*836G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1255G>A
  hgvsp: ENSP00000343540.4:p.Glu419Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1393G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1165G>A
  hgvsp: ENSP00000406150.1:p.Glu389Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.744G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1315G>A
  hgvsp: ENSP00000216271.5:p.Glu439Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1030G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5587G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1331G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.709G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.950G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.37G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.465G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu439Lys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

22-50686343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686343
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686343
    reference: chr 22
allele count: 6
allele frequency: 5.062863893342334e-5
allele num: 118510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*582G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1163G>A
  hgvsp: ENSP00000406150.1:p.Arg388Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*834G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.948G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.742G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1163G>A
  hgvsp: ENSP00000397542.1:p.Arg388Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.463G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.35G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1313G>A
  hgvsp: ENSP00000216271.5:p.Arg438Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5585G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1329G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1028G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.707G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1391G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1253G>A
  hgvsp: ENSP00000343540.4:p.Arg418Lys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.380G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg438Lys
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

22-50686345-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686345
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686345
    reference: chr 22
allele count: 2
allele frequency: 1.687564338390401e-5
allele num: 118514
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.378G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.946G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.705G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1311G>A
  hgvsp: ENST00000216271.5:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*580G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1161G>A
  hgvsp: ENST00000448072.1:c.1161G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5583G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.461G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1161G>A
  hgvsp: ENST00000454936.1:c.1161G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*832G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.33G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.740G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1327G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1251G>A
  hgvsp: ENST00000349505.4:c.1251G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1389G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1026G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10743
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu437Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

22-50686354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686354
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686354
    reference: chr 22
allele count: 1
allele frequency: 8.432983083435934e-6
allele num: 118582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.452G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5574G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1152G>A
  hgvsp: ENST00000448072.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1242G>A
  hgvsp: ENST00000349505.4:c.1242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.24G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.369G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.731G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1017G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1318G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1302G>A
  hgvsp: ENST00000216271.5:c.1302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*823G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.696G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*571G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1152G>A
  hgvsp: ENST00000454936.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1380G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.937G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala434Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

22-50686355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686355
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686355
    reference: chr 22
allele count: 5
allele frequency: 4.217131675719443e-5
allele num: 118564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1151C>T
  hgvsp: ENSP00000406150.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1379C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1016C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1151C>T
  hgvsp: ENSP00000397542.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.23C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.451C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5573C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.936C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.695C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1301C>T
  hgvsp: ENSP00000216271.5:p.Ala434Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.730C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*822C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1241C>T
  hgvsp: ENSP00000343540.4:p.Ala414Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*570C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1317C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.368C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala434Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

22-50686366-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686366
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686366
    reference: chr 22
allele count: 1
allele frequency: 8.423038695439767e-6
allele num: 118722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.12C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*559C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.719C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1290C>G
  hgvsp: ENSP00000216271.5:p.Ile430Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5562C>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1368C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*811C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1230C>G
  hgvsp: ENSP00000343540.4:p.Ile410Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.684C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1005C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.440C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1140C>G
  hgvsp: ENSP00000406150.1:p.Ile380Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.357C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1140C>G
  hgvsp: ENSP00000397542.1:p.Ile380Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1306C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.925C>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile430Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

22-50686367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686367
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686367
    reference: chr 22
allele count: 8
allele frequency: 6.737863423508405e-5
allele num: 118732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1004T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*558T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1139T>C
  hgvsp: ENSP00000397542.1:p.Ile380Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1229T>C
  hgvsp: ENSP00000343540.4:p.Ile410Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1305T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.439T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.924T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1367T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1139T>C
  hgvsp: ENSP00000406150.1:p.Ile380Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.718T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*810T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.683T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1289T>C
  hgvsp: ENSP00000216271.5:p.Ile430Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5561T>C
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.11T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.356T>C
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile430Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

22-50686371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686371
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686371
    reference: chr 22
allele count: 4964
allele frequency: 4.179717759590448e-2
allele num: 118764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.435G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1285G>A
  hgvsp: ENSP00000216271.5:p.Val429Ile
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1363G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1301G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.679G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.1000G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*554G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.920G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1135G>A
  hgvsp: ENSP00000406150.1:p.Val379Ile
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5557G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1135G>A
  hgvsp: ENSP00000397542.1:p.Val379Ile
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*806G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1225G>A
  hgvsp: ENSP00000343540.4:p.Val409Ile
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.714G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.7G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.352G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 347
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 1.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 462
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 3.75e1
  variant carriers: 486
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 31
genotype quality: GenotypeQuality
hgvs: p.Val429Ile
num of homozygotes: 137
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

22-50686372-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686372
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686372
    reference: chr 22
allele count: 204
allele frequency: 1.717113901888825e-3
allele num: 118804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.434C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1134C>T
  hgvsp: ENST00000454936.1:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1224C>T
  hgvsp: ENST00000349505.4:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.678C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*805C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*553C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.999C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.713C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5556C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1134C>T
  hgvsp: ENST00000448072.1:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1284C>T
  hgvsp: ENST00000216271.5:c.1284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.6C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1300C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.351C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.919C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1362C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 27419
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Asp428Asp
num of homozygotes: 4
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/22-50686374-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686374
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686373
    reference: chr 22
allele count: 1
allele frequency: 8.417225009258947e-6
allele num: 118804
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1281delT
  hgvsp: ENSP00000216271.5:p.Asp428ThrfsTer10
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1221delT
  hgvsp: ENSP00000343540.4:p.Asp408ThrfsTer10
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.675delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.431delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1131delT
  hgvsp: ENSP00000397542.1:p.Asp378ThrfsTer10
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1297delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5553delT
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1359delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*802delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*550delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1131delT
  hgvsp: ENSP00000406150.1:p.Asp378ThrfsTer10
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.3delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.916delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.710delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.348delT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.996delT
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp428ThrfsTer10
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: CA
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

22-50686374-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686374
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686372
    reference: chr 22
allele count: 2
allele frequency: 1.683445001851789e-5
allele num: 118804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1220_1221delCT
  hgvsp: ENSP00000343540.4:p.Pro407ArgfsTer96
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.709_710delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*549_*550delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1130_1131delCT
  hgvsp: ENSP00000406150.1:p.Pro377ArgfsTer204
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.674_675delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.347_348delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5552_5553delCT
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*801_*802delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1280_1281delCT
  hgvsp: ENSP00000216271.5:p.Pro427ArgfsTer96
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.915_916delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.2_3delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1296_1297delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1130_1131delCT
  hgvsp: ENSP00000397542.1:p.Pro377ArgfsTer96
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.995_996delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.430_431delCT
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1358_1359delCT
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11116
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro427ArgfsTer96
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: CAG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

22-50686376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686376
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686376
    reference: chr 22
allele count: 7
allele frequency: 5.891363261458701e-5
allele num: 118818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.995C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1358C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.430C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1220C>T
  hgvsp: ENSP00000343540.4:p.Pro407Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1130C>T
  hgvsp: ENSP00000397542.1:p.Pro377Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.2C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5552C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*549C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1130C>T
  hgvsp: ENSP00000406150.1:p.Pro377Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.709C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1280C>T
  hgvsp: ENSP00000216271.5:p.Pro427Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*801C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.674C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1296C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.347C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.915C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro427Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

22-50686377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686377
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686377
    reference: chr 22
allele count: 1
allele frequency: 8.415524960447032e-6
allele num: 118828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.673C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5551C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1279C>T
  hgvsp: ENSP00000216271.5:p.Pro427Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.708C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*800C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1129C>T
  hgvsp: ENSP00000397542.1:p.Pro377Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1129C>T
  hgvsp: ENSP00000406150.1:p.Pro377Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1295C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.994C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.429C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1219C>T
  hgvsp: ENSP00000343540.4:p.Pro407Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.346C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.914C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000497952
  gene symbol: HDAC10
  hgvsc: ENST00000497952.1:n.1C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*548C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1357C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro427Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

22-50686387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686387
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686387
    reference: chr 22
allele count: 1
allele frequency: 8.411702360323682e-6
allele num: 118882
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1269G>A
  hgvsp: ENST00000216271.5:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.336G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*790G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1285G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.698G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5541G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1347G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1119G>A
  hgvsp: ENST00000454936.1:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.419G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.663G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.984G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1119G>A
  hgvsp: ENST00000448072.1:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*538G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1209G>A
  hgvsp: ENST00000349505.4:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.904G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14122
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu423Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/22-50686388-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686388
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686388
    reference: chr 22
allele count: 1
allele frequency: 8.410853365182432e-6
allele num: 118894
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.697T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.335T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1284T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*537T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1268T>G
  hgvsp: ENSP00000216271.5:p.Leu423Trp
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5540T>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1118T>G
  hgvsp: ENSP00000406150.1:p.Leu373Trp
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1208T>G
  hgvsp: ENSP00000343540.4:p.Leu403Trp
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.418T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1118T>G
  hgvsp: ENSP00000397542.1:p.Leu373Trp
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.903T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.662T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*789T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.983T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1346T>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu423Trp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

22-50686389-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686389
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686389
    reference: chr 22
allele count: 4
allele frequency: 3.364567737159968e-5
allele num: 118886
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.661T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.417T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1345T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.902T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1117T>C
  hgvsp: ENST00000454936.1:c.1117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.982T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5539T>C
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1267T>C
  hgvsp: ENST00000216271.5:c.1267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*788T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.696T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1207T>C
  hgvsp: ENST00000349505.4:c.1207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*536T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1283T>C
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1117T>C
  hgvsp: ENST00000448072.1:c.1117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.334T>C
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu423Leu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

22-50686392-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686392
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686392
    reference: chr 22
allele count: 1
allele frequency: 8.412551526878102e-6
allele num: 118870
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1264A>G
  hgvsp: ENSP00000216271.5:p.Thr422Ala
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.693A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*533A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.414A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1114A>G
  hgvsp: ENSP00000397542.1:p.Thr372Ala
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1204A>G
  hgvsp: ENSP00000343540.4:p.Thr402Ala
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*785A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.899A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1280A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5536A>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.979A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.658A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1342A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1114A>G
  hgvsp: ENSP00000406150.1:p.Thr372Ala
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.331A>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr422Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

22-50686393-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686393
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686393
    reference: chr 22
allele count: 1
allele frequency: 8.41226845231085e-6
allele num: 118874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.692C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.978C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*532C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.898C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5535C>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.413C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1263C>G
  hgvsp: ENSP00000216271.5:p.Ile421Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1113C>G
  hgvsp: ENSP00000397542.1:p.Ile371Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*784C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1113C>G
  hgvsp: ENSP00000406150.1:p.Ile371Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1341C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.657C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.330C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1203C>G
  hgvsp: ENSP00000343540.4:p.Ile401Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1279C>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile421Met
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/22-50686394-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686394
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686394
    reference: chr 22
allele count: 1
allele frequency: 8.410994852471151e-6
allele num: 118892
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1340T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1202T>G
  hgvsp: ENSP00000343540.4:p.Ile401Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*783T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.412T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1112T>G
  hgvsp: ENSP00000397542.1:p.Ile371Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1262T>G
  hgvsp: ENSP00000216271.5:p.Ile421Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5534T>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.977T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.656T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1112T>G
  hgvsp: ENSP00000406150.1:p.Ile371Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.691T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*531T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1278T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.329T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.897T>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile421Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

22-50686395-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686395
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686395
    reference: chr 22
allele count: 1
allele frequency: 8.411843876177658e-6
allele num: 118880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.411A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1111A>G
  hgvsp: ENSP00000397542.1:p.Ile371Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.328A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.976A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1339A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*530A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.690A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1261A>G
  hgvsp: ENSP00000216271.5:p.Ile421Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5533A>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1111A>G
  hgvsp: ENSP00000406150.1:p.Ile371Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.896A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*782A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1201A>G
  hgvsp: ENSP00000343540.4:p.Ile401Val
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1277A>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.655A>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile421Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

22-50686399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686399
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686399
    reference: chr 22
allele count: 4
allele frequency: 3.36479415871734e-5
allele num: 118878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.324G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.686G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.407G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1197G>A
  hgvsp: ENST00000349505.4:c.1197G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1107G>A
  hgvsp: ENST00000448072.1:c.1107G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*526G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1257G>A
  hgvsp: ENST00000216271.5:c.1257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1107G>A
  hgvsp: ENST00000454936.1:c.1107G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1273G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.972G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5529G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*778G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.892G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.651G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1335G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro419Pro
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

22-50686400-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686400
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686400
    reference: chr 22
allele count: 1
allele frequency: 8.413117733169558e-6
allele num: 118862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1106C>G
  hgvsp: ENSP00000406150.1:p.Pro369Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1334C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5528C>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*525C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1106C>G
  hgvsp: ENSP00000397542.1:p.Pro369Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1196C>G
  hgvsp: ENSP00000343540.4:p.Pro399Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.406C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1256C>G
  hgvsp: ENSP00000216271.5:p.Pro419Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1272C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.971C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.891C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*777C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.650C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.323C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.685C>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro419Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

22-50686401-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686401
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686401
    reference: chr 22
allele count: 11
allele frequency: 9.254429506486513e-5
allele num: 118862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*776C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1255C>A
  hgvsp: ENSP00000216271.5:p.Pro419Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1195C>A
  hgvsp: ENSP00000343540.4:p.Pro399Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1333C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.684C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1105C>A
  hgvsp: ENSP00000397542.1:p.Pro369Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1105C>A
  hgvsp: ENSP00000406150.1:p.Pro369Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5527C>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.649C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*524C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.405C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.970C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.322C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1271C>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.890C>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro419Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

22-50686402-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686402
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686402
    reference: chr 22
allele count: 1
allele frequency: 8.413259296651523e-6
allele num: 118860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1194G>A
  hgvsp: ENST00000349505.4:c.1194G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.683G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1254G>A
  hgvsp: ENST00000216271.5:c.1254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1104G>A
  hgvsp: ENST00000448072.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1104G>A
  hgvsp: ENST00000454936.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.404G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*775G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1270G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.648G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5526G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.889G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.969G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*523G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.321G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1332G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr418Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

22-50686403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686403
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686403
    reference: chr 22
allele count: 38
allele frequency: 3.196662011878123e-4
allele num: 118874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.968C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1193C>T
  hgvsp: ENSP00000343540.4:p.Thr398Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1103C>T
  hgvsp: ENSP00000406150.1:p.Thr368Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.888C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1253C>T
  hgvsp: ENSP00000216271.5:p.Thr418Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1331C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.320C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.682C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*522C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*774C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1103C>T
  hgvsp: ENSP00000397542.1:p.Thr368Met
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5525C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.403C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.647C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1269C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14005
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr418Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

22-50686411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686411
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686411
    reference: chr 22
allele count: 1
allele frequency: 8.416658250008417e-6
allele num: 118812
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1245C>T
  hgvsp: ENST00000216271.5:c.1245C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*514C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1095C>T
  hgvsp: ENST00000454936.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1185C>T
  hgvsp: ENST00000349505.4:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1323C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5517C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.395C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*766C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1095C>T
  hgvsp: ENST00000448072.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.960C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.312C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.880C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1261C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.674C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.639C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala415Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

22-50686413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686413
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686413
    reference: chr 22
allele count: 1
allele frequency: 8.416941620092923e-6
allele num: 118808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.393G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5515G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1093G>A
  hgvsp: ENSP00000397542.1:p.Ala365Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.958G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1243G>A
  hgvsp: ENSP00000216271.5:p.Ala415Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1321G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1183G>A
  hgvsp: ENSP00000343540.4:p.Ala395Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.310G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.672G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*764G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.637G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1093G>A
  hgvsp: ENSP00000406150.1:p.Ala365Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*512G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1259G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.878G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala415Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

22-50686419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686419
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686419
    reference: chr 22
allele count: 1
allele frequency: 8.424599831508003e-6
allele num: 118700
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1237G>A
  hgvsp: ENSP00000216271.5:p.Ala413Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1177G>A
  hgvsp: ENSP00000343540.4:p.Ala393Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*758G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1087G>A
  hgvsp: ENSP00000397542.1:p.Ala363Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*506G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.952G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1087G>A
  hgvsp: ENSP00000406150.1:p.Ala363Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.387G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5509G>A
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1253G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1315G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.666G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.872G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.304G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.631G>A
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala413Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

22-50686420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686420
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686420
    reference: chr 22
allele count: 3
allele frequency: 2.527592889038672e-5
allele num: 118690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*757C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*505C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.386C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.630C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1236C>T
  hgvsp: ENST00000216271.5:c.1236C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.665C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.951C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1176C>T
  hgvsp: ENST00000349505.4:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1086C>T
  hgvsp: ENST00000448072.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1086C>T
  hgvsp: ENST00000454936.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1252C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5508C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1314C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.871C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.303C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13575
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr412Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/22-50686424-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686424
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686424
    reference: chr 22
allele count: 40
allele frequency: 3.371146358319146e-4
allele num: 118654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.947G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5504G>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.299G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.382G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1082G>T
  hgvsp: ENSP00000406150.1:p.Arg361Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1082G>T
  hgvsp: ENSP00000397542.1:p.Arg361Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.867G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1248G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.661G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*753G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*501G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1232G>T
  hgvsp: ENSP00000216271.5:p.Arg411Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.626G>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1172G>T
  hgvsp: ENSP00000343540.4:p.Arg391Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1310G>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27697
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13520
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg411Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50686425-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686425
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686425
    reference: chr 22
allele count: 7
allele frequency: 5.900401227283455e-5
allele num: 118636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1081C>T
  hgvsp: ENSP00000406150.1:p.Arg361Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*500C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1081C>T
  hgvsp: ENSP00000397542.1:p.Arg361Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.660C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1309C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*752C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5503C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.866C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1231C>T
  hgvsp: ENSP00000216271.5:p.Arg411Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1171C>T
  hgvsp: ENSP00000343540.4:p.Arg391Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.946C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1247C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.381C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.298C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.625C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg411Cys
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

22-50686430-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686430
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686430
    reference: chr 22
allele count: 1
allele frequency: 8.436825053995681e-6
allele num: 118528
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1076C>G
  hgvsp: ENSP00000397542.1:p.Ser359Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1076C>G
  hgvsp: ENSP00000406150.1:p.Ser359Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5498C>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1226C>G
  hgvsp: ENSP00000216271.5:p.Ser409Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1304C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1166C>G
  hgvsp: ENSP00000343540.4:p.Ser389Cys
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*495C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.941C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.620C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.376C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*747C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.293C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.861C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1242C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.655C>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser409Cys
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

22-50686434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686434
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686434
    reference: chr 22
allele count: 1
allele frequency: 8.443236123541432e-6
allele num: 118438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.372C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.857C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.651C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5494C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1072C>T
  hgvsp: ENSP00000406150.1:p.Pro358Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*491C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.616C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1222C>T
  hgvsp: ENSP00000216271.5:p.Pro408Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1238C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1072C>T
  hgvsp: ENSP00000397542.1:p.Pro358Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1162C>T
  hgvsp: ENSP00000343540.4:p.Pro388Ser
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.289C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*743C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1300C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.937C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro408Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

22-50686437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686437
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686437
    reference: chr 22
allele count: 1
allele frequency: 8.448800270361608e-6
allele num: 118360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.369G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*488G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.286G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1219G>A
  hgvsp: ENSP00000216271.5:p.Ala407Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.613G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.934G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1069G>A
  hgvsp: ENSP00000406150.1:p.Ala357Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*740G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1069G>A
  hgvsp: ENSP00000397542.1:p.Ala357Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1297G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.854G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1235G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.648G>A
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1159G>A
  hgvsp: ENSP00000343540.4:p.Ala387Thr
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5491G>A
  variant of: http://identifiers.org/hgnc/6874
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala407Thr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

22-50686438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686438
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686438
    reference: chr 22
allele count: 2
allele frequency: 1.690274162469152e-5
allele num: 118324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.368C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.612C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.647C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1218C>T
  hgvsp: ENST00000216271.5:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.853C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1068C>T
  hgvsp: ENST00000454936.1:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1068C>T
  hgvsp: ENST00000448072.1:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1158C>T
  hgvsp: ENST00000349505.4:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.933C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1234C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.285C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1296C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*739C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*487C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5490C>T
  variant of: http://identifiers.org/hgnc/6874
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro406Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

22-50686441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686441
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686441
    reference: chr 22
allele count: 1
allele frequency: 8.460236886632826e-6
allele num: 118200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1065C>T
  hgvsp: ENST00000454936.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1215C>T
  hgvsp: ENST00000216271.5:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1231C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.609C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*484C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.282C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.850C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.644C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1065C>T
  hgvsp: ENST00000448072.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.930C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*736C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1155C>T
  hgvsp: ENST00000349505.4:c.1155C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.365C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5487C>T
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1293C>T
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys405Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-50686449-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686449
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686449
    reference: chr 22
allele count: 1
allele frequency: 8.484786777308286e-6
allele num: 117858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.922T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1057T>G
  hgvsp: ENSP00000406150.1:p.Cys353Gly
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5479T>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1207T>G
  hgvsp: ENSP00000216271.5:p.Cys403Gly
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*476T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.357T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.842T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*728T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1147T>G
  hgvsp: ENSP00000343540.4:p.Cys383Gly
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.601T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.636T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1057T>G
  hgvsp: ENSP00000397542.1:p.Cys353Gly
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1285T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1223T>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.274T>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys403Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

22-50686451-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686451
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686451
    reference: chr 22
allele count: 3
allele frequency: 2.551150568906577e-5
allele num: 117594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.272C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1283C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1055C>T
  hgvsp: ENSP00000397542.1:p.Pro352Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.920C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1055C>T
  hgvsp: ENSP00000406150.1:p.Pro352Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.840C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*474C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1221C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*726C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.634C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1145C>T
  hgvsp: ENSP00000343540.4:p.Pro382Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1205C>T
  hgvsp: ENSP00000216271.5:p.Pro402Leu
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.355C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.599C>T
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5477C>T
  variant of: http://identifiers.org/hgnc/6874
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro402Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

22-50686451-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50686451
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50686451
    reference: chr 22
allele count: 1
allele frequency: 8.50383522968859e-6
allele num: 117594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188130
  ensembl transcript: ENST00000497036
  gene symbol: MAPK12
  hgvsc: ENST00000497036.1:n.5477C>G
  variant of: http://identifiers.org/hgnc/6874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397542
  ensembl transcript: ENST00000448072
  gene symbol: HDAC10
  hgvsc: ENST00000448072.1:c.1055C>G
  hgvsp: ENSP00000397542.1:p.Pro352Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000470378
  gene symbol: HDAC10
  hgvsc: ENST00000470378.1:n.920C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000476310
  gene symbol: HDAC10
  hgvsc: ENST00000476310.1:n.634C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000343540
  ensembl transcript: ENST00000349505
  gene symbol: HDAC10
  hgvsc: ENST00000349505.4:c.1145C>G
  hgvsp: ENSP00000343540.4:p.Pro382Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000216271
  ensembl transcript: ENST00000216271
  gene symbol: HDAC10
  hgvsc: ENST00000216271.5:c.1205C>G
  hgvsp: ENSP00000216271.5:p.Pro402Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000475965
  gene symbol: HDAC10
  hgvsc: ENST00000475965.1:n.355C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000406150
  ensembl transcript: ENST00000454936
  gene symbol: HDAC10
  hgvsc: ENST00000454936.1:c.1055C>G
  hgvsp: ENSP00000406150.1:p.Pro352Arg
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000496235
  gene symbol: HDAC10
  hgvsc: ENST00000496235.1:n.272C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000483222
  gene symbol: HDAC10
  hgvsc: ENST00000483222.1:n.1221C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000498366
  gene symbol: HDAC10
  hgvsc: ENST00000498366.1:n.1283C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000477814
  gene symbol: HDAC10
  hgvsc: ENST00000477814.1:n.840C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000397517
  ensembl transcript: ENST00000415993
  gene symbol: HDAC10
  hgvsc: ENST00000415993.1:c.*726C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100429
  ensembl transcript: ENST00000471375
  gene symbol: HDAC10
  hgvsc: ENST00000471375.1:n.599C>G
  variant of: http://identifiers.org/hgnc/18128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100429
  ensembl protein: ENSP00000407640
  ensembl transcript: ENST00000429374
  gene symbol: HDAC10
  hgvsc: ENST00000429374.1:c.*474C>G
  variant of: http://identifiers.org/hgnc/18128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro402Arg
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

GenotypeDepth
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11605
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1807
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 326
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 3336
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3602
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37360
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 3.045785026527805e-3
allele num: 10178
num of homozygotes: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.21256214380987e-4
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65236
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.54e0

QD
type: SiteQuality
SIO_000300: 1.303e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.474e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 1.751244e6

GenotypeDepth
all individuals: 11655
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 675
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 720
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1804
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 499
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8626
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.606429192006951e-4
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

FS
type: SiteQuality
SIO_000300: 9.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.089e0

DP
type: SiteQuality
SIO_000300: 1.74887e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.425e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeDepth
all individuals: 39
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3328
bin: 3.75e1
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65216
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.06767286336585e-5
allele num: 65196
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 4
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allele num: 10172
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 1.212709192335678e-4
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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ReadPosRankSum
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 65196
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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African
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East Asian
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MQRankSum
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InbreedingCoeff
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DP
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QD
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FS
type: SiteQuality
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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Latino
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African
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European (Non-Finnish)
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South Asian
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Other
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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FS
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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Other
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East Asian
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South Asian
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European (Finnish)
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ClippingRankSum
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MQRankSum
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MQ
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.535296465747536e-5
allele num: 65134
num of homozygotes: 0

MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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MQ
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.535437906891045e-5
allele num: 65128
num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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MQ
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BaseQRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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African
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65084
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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MQRankSum
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DP
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ClippingRankSum
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FS
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VQSLOD
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MQ
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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FS
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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South Asian
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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DP
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 3.748273821266522e-3
allele num: 10138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.537799101925324e-4
allele num: 65028
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
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SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 1.7218e6

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

QD
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SIO_000300: 1.38e1

FS
type: SiteQuality
SIO_000300: 1.094e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.12e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65020
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.426e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
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SIO_000300: 1.719368e6

MQRankSum
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SIO_000300: 3.85e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 1.331e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.797e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.02e-1

ReadPosRankSum
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SIO_000300: 1.93e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 311
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.476447071093343e-4
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538319539734794e-5
allele num: 65006
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.14e-1

QD
type: SiteQuality
SIO_000300: 1.615e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

MQ
type: SiteQuality
SIO_000300: 5.755e1

FS
type: SiteQuality
SIO_000300: 1.796e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

DP
type: SiteQuality
SIO_000300: 1.7161e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

GenotypeDepth
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bin: 7.5e0
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64972
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

QD
type: SiteQuality
SIO_000300: 1.037e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 1.412e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

DP
type: SiteQuality
SIO_000300: 1.715729e6

GenotypeDepth
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bin: 2.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.692628650904033e-5
allele num: 11504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -5.31e-1

DP
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FS
type: SiteQuality
SIO_000300: 1.062e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.884e1

QD
type: SiteQuality
SIO_000300: 6.68e0

VQSLOD
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SIO_000300: 1.69e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214624073849144e-4
allele num: 16466
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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QD
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VQSLOD
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DP
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BaseQRankSum
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.85e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.082234003205523e-5
allele num: 64888
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

ClippingRankSum
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SIO_000300: -1.213e0

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

ReadPosRankSum
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VQSLOD
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SIO_000300: 3.7e-2

FS
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SIO_000300: 9.137e0

DP
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SIO_000300: 1.709572e6

QD
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SIO_000300: 1.338e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6262
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541544627716972e-5
allele num: 64870
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.05e-1

DP
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SIO_000300: 1.708431e6

ClippingRankSum
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -2.438e0

InbreedingCoeff
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SIO_000300: 3.0e-4

QD
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MQRankSum
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SIO_000300: -1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.085848299697587e-5
allele num: 64812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 4.416e0

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.413e1

ClippingRankSum
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SIO_000300: 3.15e-1

BaseQRankSum
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SIO_000300: -1.553e0

DP
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SIO_000300: 1.704427e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 2.322880371660859e-4
allele num: 8610
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -3.0e-4

BaseQRankSum
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DP
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SIO_000300: 1.70058e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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QD
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MQRankSum
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FS
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 7

GenotypeDepth
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variant carriers: 16

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele frequency: 6.437021572720946e-3
allele num: 11496
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64766
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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ClippingRankSum
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MQ
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 6.081245439065921e-5
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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African
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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num of homozygotes: 0

Other
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East Asian
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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QD
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MQ
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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ClippingRankSum
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QD
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InbreedingCoeff
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VQSLOD
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FS
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16452
num of homozygotes: 0

Latino
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European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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African
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Latino
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Other
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South Asian
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VQSLOD
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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QD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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South Asian
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African
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Latino
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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QD
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FS
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MQRankSum
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ClippingRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1583
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 6615
bin: 9.75e1
variant carriers: 4784

GenotypeQuality
all individuals: 38786
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 184
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1846
bin: 7.25e1
variant carriers: 9

Other
type: Population
allele count: 38
allele frequency: 4.357798165137615e-2
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 333
allele frequency: 5.328e-2
allele num: 6250
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 4001
allele frequency: 6.160123171670516e-2
allele num: 64950
num of homozygotes: 129

African
type: Population
allele count: 98
allele frequency: 9.685708638070766e-3
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 266
allele frequency: 2.315056570931245e-2
allele num: 11490
num of homozygotes: 1

South Asian
type: Population
allele count: 227
allele frequency: 1.377761592619568e-2
allele num: 16476
num of homozygotes: 2

DP
type: SiteQuality
SIO_000300: 1.782653e6

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.61e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 3

GenotypeDepth
all individuals: 799
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 684
bin: 4.75e1
variant carriers: 25

GenotypeDepth
all individuals: 11094
bin: 3.25e1
variant carriers: 12

GenotypeDepth
all individuals: 367
bin: 5.75e1
variant carriers: 19

GenotypeDepth
all individuals: 14008
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 424
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 5.25e1
variant carriers: 25

GenotypeDepth
all individuals: 248
bin: 6.25e1
variant carriers: 19

GenotypeDepth
all individuals: 2401
bin: 3.75e1
variant carriers: 22

GenotypeDepth
all individuals: 13
bin: 9.25e1
variant carriers: 3

GenotypeDepth
all individuals: 83
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7755
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variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
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variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 9.75e1
variant carriers: 198

GenotypeQuality
all individuals: 42111
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.696807364305286e-5
allele num: 64962
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322880371660859e-4
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

South Asian
type: Population
allele count: 196
allele frequency: 1.189898008742108e-2
allele num: 16472
num of homozygotes: 4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.86e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

QD
type: SiteQuality
SIO_000300: 1.311e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.4e-1

DP
type: SiteQuality
SIO_000300: 1.68373e6

GenotypeDepth
all individuals: 2387
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 660
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 423
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 14065
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
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variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
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variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7803
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.877518767285657e-5
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64972
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.266e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

DP
type: SiteQuality
SIO_000300: 1.67961e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

GenotypeDepth
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 798
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 423
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14065
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1100
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
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variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 660
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7803
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21447656060238e-4
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

DP
type: SiteQuality
SIO_000300: 1.67961e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeDepth
all individuals: 11115
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 416
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
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variant carriers: 0

GenotypeDepth
all individuals: 352
bin: 5.75e1
variant carriers: 3

GenotypeDepth
all individuals: 78
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variant carriers: 0

GenotypeDepth
all individuals: 27
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variant carriers: 0

GenotypeDepth
all individuals: 27621
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
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variant carriers: 0

GenotypeDepth
all individuals: 20
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variant carriers: 0

GenotypeDepth
all individuals: 1104
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7809
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.07755303100274e-4
allele num: 64962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.28e-1

DP
type: SiteQuality
SIO_000300: 1.680881e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.465e0

FS
type: SiteQuality
SIO_000300: 2.766e0

QD
type: SiteQuality
SIO_000300: 1.174e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

GenotypeDepth
all individuals: 710
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 786
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 352
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 431
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variant carriers: 0

GenotypeDepth
all individuals: 349
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variant carriers: 0

GenotypeDepth
all individuals: 27635
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11129
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 78
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variant carriers: 0

GenotypeDepth
all individuals: 229
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variant carriers: 0

GenotypeDepth
all individuals: 658
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
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variant carriers: 0

GenotypeQuality
all individuals: 136
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variant carriers: 0

GenotypeQuality
all individuals: 7802
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2033
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variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

QD
type: SiteQuality
SIO_000300: 1.753e1

VQSLOD
type: SiteQuality
SIO_000300: -5.909e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.681123e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.457e0

GenotypeDepth
all individuals: 134
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 784
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11129
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2388
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 349
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 658
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
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variant carriers: 0

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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.861932938856015e-5
allele num: 10140
num of homozygotes: 0

Latino
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Other
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allele frequency: 0.0e0
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VQSLOD
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ReadPosRankSum
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FS
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65026
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.868e1

MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65030
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.475238922675934e-4
allele num: 11510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.503e1

MQRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 9.48e-1

DP
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SIO_000300: 1.682628e6

ClippingRankSum
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SIO_000300: -1.063e0

FS
type: SiteQuality
SIO_000300: 7.66e-1

VQSLOD
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GenotypeDepth
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bin: 4.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65020
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.871668311944718e-5
allele num: 10130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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DP
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10132
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.537893700787402e-5
allele num: 65024
num of homozygotes: 0

African
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allele count: 0
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Latino
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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MQRankSum
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VQSLOD
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QD
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Latino
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South Asian
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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DP
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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DP
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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African
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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Other
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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MQ
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QD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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East Asian
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InbreedingCoeff
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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MQRankSum
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QD
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InbreedingCoeff
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FS
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MQ
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DP
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VQSLOD
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.539408866995074e-5
allele num: 64960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.709e0

MQRankSum
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DP
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SIO_000300: 1.679299e6

InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 5.889e1

ClippingRankSum
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SIO_000300: -2.22e-1

ReadPosRankSum
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SIO_000300: -6.5e-2

VQSLOD
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SIO_000300: -7.12e-2

QD
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SIO_000300: 1.131e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64950
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.01e-1

InbreedingCoeff
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SIO_000300: 5.0e-4

ReadPosRankSum
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FS
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MQ
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DP
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SIO_000300: 1.678895e6

MQRankSum
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ClippingRankSum
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BaseQRankSum
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SIO_000300: -1.141e0

QD
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SIO_000300: 1.292e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.541164503899146e-5
allele num: 64886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 1.676506e6

ClippingRankSum
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MQRankSum
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BaseQRankSum
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SIO_000300: 2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e0

QD
type: SiteQuality
SIO_000300: 1.168e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.605071205279611e-4
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
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DP
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QD
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FS
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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BaseQRankSum
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SIO_000300: 3.7e-1

VQSLOD
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 1
allele frequency: 1.152073732718894e-3
allele num: 868
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
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allele count: 34
allele frequency: 5.242059821153253e-4
allele num: 64860
num of homozygotes: 0

African
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allele count: 4
allele frequency: 3.958044725905402e-4
allele num: 10106
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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DP
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FS
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6282
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European (Non-Finnish)
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allele count: 7
allele frequency: 1.079414032382421e-4
allele num: 64850
num of homozygotes: 0

East Asian
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Other
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 520
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GenotypeQuality
all individuals: 2000
bin: 7.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.916699722332408e-5
allele num: 10084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.122e0

VQSLOD
type: SiteQuality
SIO_000300: 8.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 7.99e-1

DP
type: SiteQuality
SIO_000300: 1.670461e6

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.007e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

QD
type: SiteQuality
SIO_000300: 1.515e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.119202056051891e-5
allele num: 16342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.296e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

DP
type: SiteQuality
SIO_000300: 1.668443e6

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 1985
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64738
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.668557e6

QD
type: SiteQuality
SIO_000300: 1.196e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.411e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 2358
bin: 3.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 25
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
all individuals: 1667
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 229
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GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54526068547764e-5
allele num: 64714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.134969325153375e-5
allele num: 16300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.667063e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

FS
type: SiteQuality
SIO_000300: 3.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.527e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

GenotypeDepth
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bin: 1.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.165988407941794e-5
allele num: 16218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
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BaseQRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.263e0

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16054
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.89e-1

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 1.95e0

ClippingRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39740
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.104915080572547e-5
allele num: 64414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164415463437354e-4
allele num: 8588
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e0

MQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

QD
type: SiteQuality
SIO_000300: 1.235e1

FS
type: SiteQuality
SIO_000300: 6.437e0

DP
type: SiteQuality
SIO_000300: 1.647723e6

MQ
type: SiteQuality
SIO_000300: 5.912e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

GenotypeDepth
all individuals: 1859
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12410
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 348
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10901
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552457540286273e-5
allele num: 64414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

MQ
type: SiteQuality
SIO_000300: 5.912e1

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

QD
type: SiteQuality
SIO_000300: 1.235e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3