17-43473997-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43473997
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43473997
    reference: chr 17
allele count: 10
allele frequency: 8.918856245875028e-5
allele num: 112122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+37G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+37G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38190
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-43473997-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43473997
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43473997
    reference: chr 17
allele count: 2
allele frequency: 1.783771249175006e-5
allele num: 112122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+37G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+37G>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38190
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4023
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-43474001-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474001
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474001
    reference: chr 17
allele count: 1
allele frequency: 8.850497397953764e-6
allele num: 112988
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+33G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+33G>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38586
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

17-43474003-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474003
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474003
    reference: chr 17
allele count: 1
allele frequency: 8.83158173628897e-6
allele num: 113230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+31G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+31G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3567
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

17-43474004-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474004
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474004
    reference: chr 17
allele count: 1
allele frequency: 8.811038468993955e-6
allele num: 113494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+30C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47971
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

17-43474011-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474011
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474011
    reference: chr 17
allele count: 4
allele frequency: 3.49778764931181e-5
allele num: 114358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+23G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+23G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14294
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

17-43474012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474012
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474012
    reference: chr 17
allele count: 1
allele frequency: 8.7415643903633e-6
allele num: 114396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+22C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+22C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

17-43474012-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474012
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474013
    reference: chr 17
allele count: 7
allele frequency: 6.11909507325431e-5
allele num: 114396
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+21dupG
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+21dupG
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

17-43474013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474013
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474013
    reference: chr 17
allele count: 463
allele frequency: 4.037250832737483e-3
allele num: 114682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+21G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 14349
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 38558
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 3.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.25e1
  variant carriers: 2
num of homozygotes: 4
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-43474014-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474014
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474014
    reference: chr 17
allele count: 1
allele frequency: 8.694291328313829e-6
allele num: 115018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+20G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+20G>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4579
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

17-43474017-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474017
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474017
    reference: chr 17
allele count: 2
allele frequency: 1.731421843617979e-5
allele num: 115512
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+17G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+17G>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-43474018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474018
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474018
    reference: chr 17
allele count: 2
allele frequency: 1.730522964039733e-5
allele num: 115572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+16G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+16G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4596
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

17-43474018-CGCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474018
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474014
    reference: chr 17
allele count: 3
allele frequency: 2.595784446059599e-5
allele num: 115572
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+12_1051+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+12_2008+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+12_1051+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+12_1993+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+12_1408+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+12_970+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+12_103+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+12_2611+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+12_2074+15delCTGC
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: CGCAG
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-43474019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474019
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474019
    reference: chr 17
allele count: 1
allele frequency: 8.641548565502938e-6
allele num: 115720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+15C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

17-43474019-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474019
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474019
    reference: chr 17
allele count: 1
allele frequency: 8.641548565502938e-6
allele num: 115720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+15C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+15C>G
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-43474024-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474024
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474024
    reference: chr 17
allele count: 1
allele frequency: 8.572506257929568e-6
allele num: 116652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+10G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+10G>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

17-43474026-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474026
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474026
    reference: chr 17
allele count: 1
allele frequency: 8.556515786771626e-6
allele num: 116870
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+8A>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+8A>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39771
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1051+8A>C
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

17-43474027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474027
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474027
    reference: chr 17
allele count: 1
allele frequency: 8.549931600547196e-6
allele num: 116960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408+7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074+7G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1051+7G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

17-43474034-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474034
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474034
    reference: chr 17
allele count: 1
allele frequency: 8.487667419239845e-6
allele num: 117818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2074G>C
  hgvsp: ENSP00000403323.1:p.Asp692His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1993G>C
  hgvsp: ENSP00000409330.1:p.Asp665His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.103G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1051G>C
  hgvsp: ENSP00000366121.2:p.Asp351His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.970G>C
  hgvsp: ENSP00000431591.1:p.Asp324His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2611G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1408G>C
  hgvsp: ENSP00000432762.1:p.Asp470His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1051G>C
  hgvsp: ENSP00000408235.1:p.Asp351His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2008G>C
  hgvsp: ENSP00000433942.1:p.Asp670His
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4793
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp351His
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

17-43474036-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474036
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474036
    reference: chr 17
allele count: 1
allele frequency: 8.478456242687331e-6
allele num: 117946
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1049A>G
  hgvsp: ENSP00000366121.2:p.Lys350Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.2006A>G
  hgvsp: ENSP00000433942.1:p.Lys669Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2072A>G
  hgvsp: ENSP00000403323.1:p.Lys691Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.101A>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.968A>G
  hgvsp: ENSP00000431591.1:p.Lys323Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1991A>G
  hgvsp: ENSP00000409330.1:p.Lys664Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1049A>G
  hgvsp: ENSP00000408235.1:p.Lys350Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1406A>G
  hgvsp: ENSP00000432762.1:p.Lys469Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2609A>G
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys350Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-43474046-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474046
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474046
    reference: chr 17
allele count: 1
allele frequency: 8.45394291897741e-6
allele num: 118288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1396G>T
  hgvsp: ENSP00000432762.1:p.Gly466Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1039G>T
  hgvsp: ENSP00000366121.2:p.Gly347Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2062G>T
  hgvsp: ENSP00000403323.1:p.Gly688Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.91G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2599G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.958G>T
  hgvsp: ENSP00000431591.1:p.Gly320Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1981G>T
  hgvsp: ENSP00000409330.1:p.Gly661Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1039G>T
  hgvsp: ENSP00000408235.1:p.Gly347Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1996G>T
  hgvsp: ENSP00000433942.1:p.Gly666Cys
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly347Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

17-43474054-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474054
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474054
    reference: chr 17
allele count: 1
allele frequency: 8.441383036196651e-6
allele num: 118464
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1388G>A
  hgvsp: ENSP00000432762.1:p.Arg463Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2591G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1031G>A
  hgvsp: ENSP00000366121.2:p.Arg344Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2054G>A
  hgvsp: ENSP00000403323.1:p.Arg685Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1031G>A
  hgvsp: ENSP00000408235.1:p.Arg344Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1988G>A
  hgvsp: ENSP00000433942.1:p.Arg663Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1973G>A
  hgvsp: ENSP00000409330.1:p.Arg658Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.950G>A
  hgvsp: ENSP00000431591.1:p.Arg317Gln
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.83G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4782
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg344Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

17-43474055-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474055
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474055
    reference: chr 17
allele count: 1
allele frequency: 8.438391305081599e-6
allele num: 118506
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1030C>T
  hgvsp: ENSP00000366121.2:p.Arg344Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1987C>T
  hgvsp: ENSP00000433942.1:p.Arg663Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.82C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1387C>T
  hgvsp: ENSP00000432762.1:p.Arg463Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1030C>T
  hgvsp: ENSP00000408235.1:p.Arg344Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.949C>T
  hgvsp: ENSP00000431591.1:p.Arg317Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2053C>T
  hgvsp: ENSP00000403323.1:p.Arg685Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1972C>T
  hgvsp: ENSP00000409330.1:p.Arg658Trp
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2590C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg344Trp
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

17-43474060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474060
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474060
    reference: chr 17
allele count: 1
allele frequency: 8.427439743805831e-6
allele num: 118660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1382C>T
  hgvsp: ENSP00000432762.1:p.Ser461Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1025C>T
  hgvsp: ENSP00000408235.1:p.Ser342Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1982C>T
  hgvsp: ENSP00000433942.1:p.Ser661Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2048C>T
  hgvsp: ENSP00000403323.1:p.Ser683Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2585C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.944C>T
  hgvsp: ENSP00000431591.1:p.Ser315Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1025C>T
  hgvsp: ENSP00000366121.2:p.Ser342Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1967C>T
  hgvsp: ENSP00000409330.1:p.Ser656Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.77C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser342Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-43474066-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474066
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474066
    reference: chr 17
allele count: 1
allele frequency: 8.423322495325057e-6
allele num: 118718
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1019T>C
  hgvsp: ENSP00000366121.2:p.Leu340Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2579T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2042T>C
  hgvsp: ENSP00000403323.1:p.Leu681Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1976T>C
  hgvsp: ENSP00000433942.1:p.Leu659Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.938T>C
  hgvsp: ENSP00000431591.1:p.Leu313Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1376T>C
  hgvsp: ENSP00000432762.1:p.Leu459Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1019T>C
  hgvsp: ENSP00000408235.1:p.Leu340Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1961T>C
  hgvsp: ENSP00000409330.1:p.Leu654Pro
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.71T>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40114
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4773
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu340Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

17-43474072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474072
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474072
    reference: chr 17
allele count: 2
allele frequency: 1.683076664142052e-5
allele num: 118830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2036C>T
  hgvsp: ENSP00000403323.1:p.Pro679Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.65C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1370C>T
  hgvsp: ENSP00000432762.1:p.Pro457Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1013C>T
  hgvsp: ENSP00000366121.2:p.Pro338Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.932C>T
  hgvsp: ENSP00000431591.1:p.Pro311Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1955C>T
  hgvsp: ENSP00000409330.1:p.Pro652Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1013C>T
  hgvsp: ENSP00000408235.1:p.Pro338Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2573C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1970C>T
  hgvsp: ENSP00000433942.1:p.Pro657Leu
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro338Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

17-43474078-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474078
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474078
    reference: chr 17
allele count: 1
allele frequency: 8.410994852471151e-6
allele num: 118892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.1007G>A
  hgvsp: ENSP00000408235.1:p.Arg336Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.926G>A
  hgvsp: ENSP00000431591.1:p.Arg309Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1949G>A
  hgvsp: ENSP00000409330.1:p.Arg650Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.1007G>A
  hgvsp: ENSP00000366121.2:p.Arg336Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1364G>A
  hgvsp: ENSP00000432762.1:p.Arg455Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.59G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2030G>A
  hgvsp: ENSP00000403323.1:p.Arg677Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1964G>A
  hgvsp: ENSP00000433942.1:p.Arg655Lys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2567G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg336Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD

17-43474089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474089
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474089
    reference: chr 17
allele count: 1
allele frequency: 8.446659346228567e-6
allele num: 118390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.996G>A
  hgvsp: ENST00000455881.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.48G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.996G>A
  hgvsp: ENST00000376922.2:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2019G>A
  hgvsp: ENST00000428638.1:c.2019G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.915G>A
  hgvsp: ENST00000528384.1:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2556G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1353G>A
  hgvsp: ENST00000532038.1:c.1353G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1953G>A
  hgvsp: ENST00000532891.2:c.1953G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1938G>A
  hgvsp: ENST00000442348.1:c.1938G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys332Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

17-43474090-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474090
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474090
    reference: chr 17
allele count: 1
allele frequency: 8.44694474008751e-6
allele num: 118386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.914A>G
  hgvsp: ENSP00000431591.1:p.Lys305Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.995A>G
  hgvsp: ENSP00000408235.1:p.Lys332Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.995A>G
  hgvsp: ENSP00000366121.2:p.Lys332Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1352A>G
  hgvsp: ENSP00000432762.1:p.Lys451Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2018A>G
  hgvsp: ENSP00000403323.1:p.Lys673Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1952A>G
  hgvsp: ENSP00000433942.1:p.Lys651Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.47A>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2555A>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1937A>G
  hgvsp: ENSP00000409330.1:p.Lys646Arg
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys332Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

17-43474092-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474092
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474092
    reference: chr 17
allele count: 1
allele frequency: 8.445803280349994e-6
allele num: 118402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.993C>G
  hgvsp: ENST00000376922.2:c.993C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1935C>G
  hgvsp: ENST00000442348.1:c.1935C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.912C>G
  hgvsp: ENST00000528384.1:c.912C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1950C>G
  hgvsp: ENST00000532891.2:c.1950C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1350C>G
  hgvsp: ENST00000532038.1:c.1350C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2553C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.993C>G
  hgvsp: ENST00000455881.1:c.993C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.45C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2016C>G
  hgvsp: ENST00000428638.1:c.2016C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg331Arg
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

17-43474093-C-CGGAGCTTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474093
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474102
    reference: chr 17
allele count: 1
allele frequency: 8.454800635801008e-6
allele num: 118276
alternate allele: CGGAGCTTGT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.983_991dupACAAGCTCC
  hgvsp: ENSP00000408235.1:p.His328_Leu330dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsp: ENSP00000433942.1:p.His647_Leu649dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.902_910dupACAAGCTCC
  hgvsp: ENSP00000431591.1:p.His301_Leu303dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.983_991dupACAAGCTCC
  hgvsp: ENSP00000366121.2:p.His328_Leu330dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsp: ENSP00000409330.1:p.His642_Leu644dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsp: ENSP00000432762.1:p.His447_Leu449dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsp: ENSP00000403323.1:p.His669_Leu671dup
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.35_43dupACAAGCTCC
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His328_Leu330dup
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/17-43474093-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474093
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474093
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 118276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1949G>T
  hgvsp: ENSP00000433942.1:p.Arg650Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2015G>T
  hgvsp: ENSP00000403323.1:p.Arg672Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2552G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.44G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.992G>T
  hgvsp: ENSP00000366121.2:p.Arg331Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1349G>T
  hgvsp: ENSP00000432762.1:p.Arg450Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1934G>T
  hgvsp: ENSP00000409330.1:p.Arg645Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.911G>T
  hgvsp: ENSP00000431591.1:p.Arg304Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.992G>T
  hgvsp: ENSP00000408235.1:p.Arg331Leu
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15510
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg331Leu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

17-43474093-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474093
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474093
    reference: chr 17
allele count: 1
allele frequency: 8.454800635801008e-6
allele num: 118276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2552G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.992G>A
  hgvsp: ENSP00000408235.1:p.Arg331His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2015G>A
  hgvsp: ENSP00000403323.1:p.Arg672His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1934G>A
  hgvsp: ENSP00000409330.1:p.Arg645His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.992G>A
  hgvsp: ENSP00000366121.2:p.Arg331His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1349G>A
  hgvsp: ENSP00000432762.1:p.Arg450His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.911G>A
  hgvsp: ENSP00000431591.1:p.Arg304His
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.44G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1949G>A
  hgvsp: ENSP00000433942.1:p.Arg650His
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38815
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg331His
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

17-43474094-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474094
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474094
    reference: chr 17
allele count: 1
allele frequency: 8.460666362082677e-6
allele num: 118194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1948C>T
  hgvsp: ENSP00000433942.1:p.Arg650Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.910C>T
  hgvsp: ENSP00000431591.1:p.Arg304Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.43C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2014C>T
  hgvsp: ENSP00000403323.1:p.Arg672Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.991C>T
  hgvsp: ENSP00000366121.2:p.Arg331Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1348C>T
  hgvsp: ENSP00000432762.1:p.Arg450Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.991C>T
  hgvsp: ENSP00000408235.1:p.Arg331Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1933C>T
  hgvsp: ENSP00000409330.1:p.Arg645Cys
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2551C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4603
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg331Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

17-43474102-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474102
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474102
    reference: chr 17
allele count: 1
allele frequency: 8.52980313214371e-6
allele num: 117236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1925A>G
  hgvsp: ENSP00000409330.1:p.His642Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2006A>G
  hgvsp: ENSP00000403323.1:p.His669Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1340A>G
  hgvsp: ENSP00000432762.1:p.His447Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.983A>G
  hgvsp: ENSP00000408235.1:p.His328Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.35A>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.983A>G
  hgvsp: ENSP00000366121.2:p.His328Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2543A>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1940A>G
  hgvsp: ENSP00000433942.1:p.His647Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.902A>G
  hgvsp: ENSP00000431591.1:p.His301Arg
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His328Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

17-43474106-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474106
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474106
    reference: chr 17
allele count: 2
allele frequency: 1.710074046206201e-5
allele num: 116954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2539C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1936C>G
  hgvsp: ENSP00000433942.1:p.Arg646Gly
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.979C>G
  hgvsp: ENSP00000366121.2:p.Arg327Gly
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1336C>G
  hgvsp: ENSP00000432762.1:p.Arg446Gly
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.31C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1921C>G
  hgvsp: ENSP00000409330.1:p.Arg641Gly
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.979C>G
  hgvsp: ENSP00000408235.1:p.Arg327Gly
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2002C>G
  hgvsp: ENSP00000403323.1:p.Arg668Gly
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.898C>G
  hgvsp: ENSP00000431591.1:p.Arg300Gly
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15037
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg327Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-43474108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474108
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474108
    reference: chr 17
allele count: 2
allele frequency: 1.713150140478312e-5
allele num: 116744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2537T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1919T>C
  hgvsp: ENSP00000409330.1:p.Val640Ala
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.2000T>C
  hgvsp: ENSP00000403323.1:p.Val667Ala
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.29T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1334T>C
  hgvsp: ENSP00000432762.1:p.Val445Ala
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.977T>C
  hgvsp: ENSP00000408235.1:p.Val326Ala
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.896T>C
  hgvsp: ENSP00000431591.1:p.Val299Ala
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1934T>C
  hgvsp: ENSP00000433942.1:p.Val645Ala
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.977T>C
  hgvsp: ENSP00000366121.2:p.Val326Ala
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val326Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/17-43474109-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474109
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474109
    reference: chr 17
allele count: 1
allele frequency: 8.568392912225382e-6
allele num: 116708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1933G>T
  hgvsp: ENSP00000433942.1:p.Val645Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.895G>T
  hgvsp: ENSP00000431591.1:p.Val299Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1333G>T
  hgvsp: ENSP00000432762.1:p.Val445Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.976G>T
  hgvsp: ENSP00000408235.1:p.Val326Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.976G>T
  hgvsp: ENSP00000366121.2:p.Val326Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1918G>T
  hgvsp: ENSP00000409330.1:p.Val640Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1999G>T
  hgvsp: ENSP00000403323.1:p.Val667Phe
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.28G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2536G>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val326Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/17-43474114-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474114
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474114
    reference: chr 17
allele count: 1
allele frequency: 8.652764558276369e-6
allele num: 115570
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.890G>T
  hgvsp: ENSP00000431591.1:p.Ser297Ile
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1994G>T
  hgvsp: ENSP00000403323.1:p.Ser665Ile
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.23G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1328G>T
  hgvsp: ENSP00000432762.1:p.Ser443Ile
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2531G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.971G>T
  hgvsp: ENSP00000366121.2:p.Ser324Ile
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1928G>T
  hgvsp: ENSP00000433942.1:p.Ser643Ile
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.971G>T
  hgvsp: ENSP00000408235.1:p.Ser324Ile
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1913G>T
  hgvsp: ENSP00000409330.1:p.Ser638Ile
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41732
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser324Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

17-43474116-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474116
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474116
    reference: chr 17
allele count: 1
allele frequency: 8.656060107681388e-6
allele num: 115526
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1326G>A
  hgvsp: ENST00000532038.1:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1911G>A
  hgvsp: ENST00000442348.1:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1992G>A
  hgvsp: ENST00000428638.1:c.1992G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.969G>A
  hgvsp: ENST00000455881.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.888G>A
  hgvsp: ENST00000528384.1:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1926G>A
  hgvsp: ENST00000532891.2:c.1926G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.969G>A
  hgvsp: ENST00000376922.2:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.21G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2529G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu323Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

17-43474122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474122
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474122
    reference: chr 17
allele count: 1
allele frequency: 8.764088271897075e-6
allele num: 114102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1920C>T
  hgvsp: ENST00000532891.2:c.1920C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1905C>T
  hgvsp: ENST00000442348.1:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1320C>T
  hgvsp: ENST00000532038.1:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.963C>T
  hgvsp: ENST00000376922.2:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.882C>T
  hgvsp: ENST00000528384.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2523C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1986C>T
  hgvsp: ENST00000428638.1:c.1986C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.15C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.963C>T
  hgvsp: ENST00000455881.1:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser321Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP

17-43474125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474125
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474125
    reference: chr 17
allele count: 3
allele frequency: 2.637455383046437e-5
allele num: 113746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1902G>A
  hgvsp: ENST00000442348.1:c.1902G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.960G>A
  hgvsp: ENST00000376922.2:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1983G>A
  hgvsp: ENST00000428638.1:c.1983G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.12G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1317G>A
  hgvsp: ENST00000532038.1:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.879G>A
  hgvsp: ENST00000528384.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1917G>A
  hgvsp: ENST00000532891.2:c.1917G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2520G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.960G>A
  hgvsp: ENST00000455881.1:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29397
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu320Glu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-43474134-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474134
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474135
    reference: chr 17
allele count: 1
allele frequency: 9.017783068210512e-6
allele num: 110892
alternate allele: CA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.950dupT
  hgvsp: ENSP00000366121.2:p.Leu319ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1973dupT
  hgvsp: ENSP00000403323.1:p.Leu660ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2510dupT
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1307dupT
  hgvsp: ENSP00000432762.1:p.Leu438ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.950dupT
  hgvsp: ENSP00000408235.1:p.Leu319ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1907dupT
  hgvsp: ENSP00000433942.1:p.Leu638ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.2dupT
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1892dupT
  hgvsp: ENSP00000409330.1:p.Leu633ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.869dupT
  hgvsp: ENSP00000431591.1:p.Leu292ProfsTer45
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24441
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu319ProfsTer45
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

17-43474134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474134
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474134
    reference: chr 17
allele count: 1
allele frequency: 9.017783068210512e-6
allele num: 110892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1893G>A
  hgvsp: ENST00000442348.1:c.1893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.951G>A
  hgvsp: ENST00000376922.2:c.951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.951G>A
  hgvsp: ENST00000455881.1:c.951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2511G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1908G>A
  hgvsp: ENST00000532891.2:c.1908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.870G>A
  hgvsp: ENST00000528384.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1974G>A
  hgvsp: ENST00000428638.1:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.3G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1308G>A
  hgvsp: ENST00000532038.1:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val317Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

17-43474136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474136
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474136
    reference: chr 17
allele count: 2
allele frequency: 1.811102055600833e-5
allele num: 110430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000581638
  gene symbol: ARHGAP27
  hgvsc: ENST00000581638.1:n.1G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.949G>A
  hgvsp: ENSP00000408235.1:p.Val317Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1891G>A
  hgvsp: ENSP00000409330.1:p.Val631Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.949G>A
  hgvsp: ENSP00000366121.2:p.Val317Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.868G>A
  hgvsp: ENSP00000431591.1:p.Val290Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1306G>A
  hgvsp: ENSP00000432762.1:p.Val436Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1906G>A
  hgvsp: ENSP00000433942.1:p.Val636Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1972G>A
  hgvsp: ENSP00000403323.1:p.Val658Met
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2509G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12714
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23827
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val317Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-43474137-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474137
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474137
    reference: chr 17
allele count: 1
allele frequency: 9.121424401634559e-6
allele num: 109632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1890C>G
  hgvsp: ENST00000442348.1:c.1890C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1905C>G
  hgvsp: ENST00000532891.2:c.1905C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1971C>G
  hgvsp: ENST00000428638.1:c.1971C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.867C>G
  hgvsp: ENST00000528384.1:c.867C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2508C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.948C>G
  hgvsp: ENST00000376922.2:c.948C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.948C>G
  hgvsp: ENST00000455881.1:c.948C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1305C>G
  hgvsp: ENST00000532038.1:c.1305C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22593
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28071
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro316Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD

17-43474142-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474142
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474142
    reference: chr 17
allele count: 8
allele frequency: 7.41331059918083e-5
allele num: 107914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1300G>A
  hgvsp: ENSP00000432762.1:p.Gly434Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1885G>A
  hgvsp: ENSP00000409330.1:p.Gly629Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1900G>A
  hgvsp: ENSP00000433942.1:p.Gly634Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1966G>A
  hgvsp: ENSP00000403323.1:p.Gly656Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.862G>A
  hgvsp: ENSP00000431591.1:p.Gly288Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.943G>A
  hgvsp: ENSP00000408235.1:p.Gly315Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.943G>A
  hgvsp: ENSP00000366121.2:p.Gly315Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2503G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15421
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly315Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

17-43474143-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474143
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474143
    reference: chr 17
allele count: 4
allele frequency: 3.705487827472487e-5
allele num: 107948
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1965G>A
  hgvsp: ENST00000428638.1:c.1965G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.942G>A
  hgvsp: ENST00000455881.1:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.942G>A
  hgvsp: ENST00000376922.2:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1884G>A
  hgvsp: ENST00000442348.1:c.1884G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1299G>A
  hgvsp: ENST00000532038.1:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.861G>A
  hgvsp: ENST00000528384.1:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2502G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1899G>A
  hgvsp: ENST00000532891.2:c.1899G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18756
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4815
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu314Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-43474144-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474144
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474144
    reference: chr 17
allele count: 2
allele frequency: 1.857907253269917e-5
allele num: 107648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1883T>G
  hgvsp: ENSP00000409330.1:p.Leu628Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.860T>G
  hgvsp: ENSP00000431591.1:p.Leu287Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.941T>G
  hgvsp: ENSP00000366121.2:p.Leu314Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2501T>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1964T>G
  hgvsp: ENSP00000403323.1:p.Leu655Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1298T>G
  hgvsp: ENSP00000432762.1:p.Leu433Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1898T>G
  hgvsp: ENSP00000433942.1:p.Leu633Arg
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.941T>G
  hgvsp: ENSP00000408235.1:p.Leu314Arg
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9658
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5870
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu314Arg
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-43474146-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474146
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474146
    reference: chr 17
allele count: 1
allele frequency: 9.407691728757432e-6
allele num: 106296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1962C>G
  hgvsp: ENST00000428638.1:c.1962C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1896C>G
  hgvsp: ENST00000532891.2:c.1896C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1296C>G
  hgvsp: ENST00000532038.1:c.1296C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1881C>G
  hgvsp: ENST00000442348.1:c.1881C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.939C>G
  hgvsp: ENST00000376922.2:c.939C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.939C>G
  hgvsp: ENST00000455881.1:c.939C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2499C>G
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.858C>G
  hgvsp: ENST00000528384.1:c.858C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala313Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

17-43474148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474148
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474148
    reference: chr 17
allele count: 4
allele frequency: 3.771165667307765e-5
allele num: 106068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2497G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.856G>A
  hgvsp: ENSP00000431591.1:p.Ala286Thr
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.937G>A
  hgvsp: ENSP00000366121.2:p.Ala313Thr
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1894G>A
  hgvsp: ENSP00000433942.1:p.Ala632Thr
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.937G>A
  hgvsp: ENSP00000408235.1:p.Ala313Thr
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1294G>A
  hgvsp: ENSP00000432762.1:p.Ala432Thr
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1960G>A
  hgvsp: ENSP00000403323.1:p.Ala654Thr
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1879G>A
  hgvsp: ENSP00000409330.1:p.Ala627Thr
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10816
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7923
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala313Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

17-43474149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474149
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474149
    reference: chr 17
allele count: 5
allele frequency: 4.738617839948444e-5
allele num: 105516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1959C>T
  hgvsp: ENST00000428638.1:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.936C>T
  hgvsp: ENST00000455881.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1293C>T
  hgvsp: ENST00000532038.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2496C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.855C>T
  hgvsp: ENST00000528384.1:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1878C>T
  hgvsp: ENST00000442348.1:c.1878C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1893C>T
  hgvsp: ENST00000532891.2:c.1893C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.936C>T
  hgvsp: ENST00000376922.2:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16489
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16300
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11299
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13436
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro312Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-43474150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474150
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474150
    reference: chr 17
allele count: 1
allele frequency: 9.453046716956876e-6
allele num: 105786
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.935C>T
  hgvsp: ENSP00000366121.2:p.Pro312Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.854C>T
  hgvsp: ENSP00000431591.1:p.Pro285Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1877C>T
  hgvsp: ENSP00000409330.1:p.Pro626Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2495C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1958C>T
  hgvsp: ENSP00000403323.1:p.Pro653Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1892C>T
  hgvsp: ENSP00000433942.1:p.Pro631Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1292C>T
  hgvsp: ENSP00000432762.1:p.Pro431Leu
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.935C>T
  hgvsp: ENSP00000408235.1:p.Pro312Leu
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5427
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6553
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13675
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro312Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

17-43474151-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474151
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474151
    reference: chr 17
allele count: 1
allele frequency: 9.460021947250918e-6
allele num: 105708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.853C>T
  hgvsp: ENSP00000431591.1:p.Pro285Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.934C>T
  hgvsp: ENSP00000408235.1:p.Pro312Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1876C>T
  hgvsp: ENSP00000409330.1:p.Pro626Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1891C>T
  hgvsp: ENSP00000433942.1:p.Pro631Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.934C>T
  hgvsp: ENSP00000366121.2:p.Pro312Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1957C>T
  hgvsp: ENSP00000403323.1:p.Pro653Ser
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2494C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1291C>T
  hgvsp: ENSP00000432762.1:p.Pro431Ser
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16104
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5486
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro312Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

17-43474153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474153
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474153
    reference: chr 17
allele count: 1
allele frequency: 9.677731539727089e-6
allele num: 103330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1874C>T
  hgvsp: ENSP00000409330.1:p.Ala625Val
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.932C>T
  hgvsp: ENSP00000366121.2:p.Ala311Val
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1889C>T
  hgvsp: ENSP00000433942.1:p.Ala630Val
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1289C>T
  hgvsp: ENSP00000432762.1:p.Ala430Val
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1955C>T
  hgvsp: ENSP00000403323.1:p.Ala652Val
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.851C>T
  hgvsp: ENSP00000431591.1:p.Ala284Val
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2492C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.932C>T
  hgvsp: ENSP00000408235.1:p.Ala311Val
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5585
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala311Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

17-43474155-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474155
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474155
    reference: chr 17
allele count: 6
allele frequency: 5.810800340900286e-5
allele num: 103256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.930C>T
  hgvsp: ENST00000455881.1:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.930C>T
  hgvsp: ENST00000376922.2:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2490C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1287C>T
  hgvsp: ENST00000532038.1:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1872C>T
  hgvsp: ENST00000442348.1:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1887C>T
  hgvsp: ENST00000532891.2:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.849C>T
  hgvsp: ENST00000528384.1:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1953C>T
  hgvsp: ENST00000428638.1:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14915
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12479
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16812
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5048
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 1.25e1
  variant carriers: 0
hgvs: c.930C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-43474157-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474157
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474157
    reference: chr 17
allele count: 2
allele frequency: 1.930464662844346e-5
allele num: 103602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-1G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-1G>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16899
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14889
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15774
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 4.25e1
  variant carriers: 0
hgvs: c.929-1G>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

17-43474160-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474160
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474160
    reference: chr 17
allele count: 1
allele frequency: 9.726491071081197e-6
allele num: 102812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-4G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-4G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
hgvs: c.929-4G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-43474162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474162
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474162
    reference: chr 17
allele count: 1
allele frequency: 9.829942003342181e-6
allele num: 101730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-6C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-6C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12697
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5063
  bin: 3.75e1
  variant carriers: 0
hgvs: c.929-6C>T
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD

17-43474163-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474163
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474163
    reference: chr 17
allele count: 1
allele frequency: 9.816818172893802e-6
allele num: 101866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-7G>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-7G>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14422
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7090
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 7.5e0
  variant carriers: 0
hgvs: c.929-7G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-43474163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474163
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474163
    reference: chr 17
allele count: 4
allele frequency: 3.926727269157521e-5
allele num: 101866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-7G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-7G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12553
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5658
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
hgvs: c.929-7G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

17-43474164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474164
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474164
    reference: chr 17
allele count: 1
allele frequency: 9.816047274083672e-6
allele num: 101874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-8C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-8C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4891
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6990
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5587
  bin: 2.75e1
  variant carriers: 0
hgvs: c.929-8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-43474178-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474178
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474178
    reference: chr 17
allele count: 1
allele frequency: 9.837097662705596e-6
allele num: 101656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-22G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-22G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16201
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

17-43474184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474184
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474184
    reference: chr 17
allele count: 1
allele frequency: 9.875567845151096e-6
allele num: 101260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-28G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-28G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11531
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15513
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4639
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6711
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5411
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

17-43474186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474186
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474186
    reference: chr 17
allele count: 1
allele frequency: 9.843876124662847e-6
allele num: 101586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-30C>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-30C>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15788
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6632
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16787
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-43474194-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474194
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474194
    reference: chr 17
allele count: 2
allele frequency: 1.970559836049421e-5
allele num: 101494
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-38G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-38G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15163
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5052
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6338
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

17-43474196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474196
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474196
    reference: chr 17
allele count: 2
allele frequency: 1.958825488237253e-5
allele num: 102102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-40G>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-40G>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16379
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

17-43474198-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474198
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474198
    reference: chr 17
allele count: 29
allele frequency: 2.829710003512743e-4
allele num: 102484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-42T>C
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-42T>C
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19014
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14578
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum

17-43474205-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474205
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474205
    reference: chr 17
allele count: 1
allele frequency: 9.663889908966157e-6
allele num: 103478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-49C>A
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-49C>A
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20530
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21033
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12420
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/17-43474207-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43474207
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 43474207
    reference: chr 17
allele count: 1
allele frequency: 9.608547764090935e-6
allele num: 104074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000403323
  ensembl transcript: ENST00000428638
  gene symbol: ARHGAP27
  hgvsc: ENST00000428638.1:c.1952-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000366121
  ensembl transcript: ENST00000376922
  gene symbol: ARHGAP27
  hgvsc: ENST00000376922.2:c.929-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000431591
  ensembl transcript: ENST00000528384
  gene symbol: ARHGAP27
  hgvsc: ENST00000528384.1:c.848-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl transcript: ENST00000531735
  gene symbol: ARHGAP27
  hgvsc: ENST00000531735.1:n.2489-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000408235
  ensembl transcript: ENST00000455881
  gene symbol: ARHGAP27
  hgvsc: ENST00000455881.1:c.929-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000409330
  ensembl transcript: ENST00000442348
  gene symbol: ARHGAP27
  hgvsc: ENST00000442348.1:c.1871-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000432762
  ensembl transcript: ENST00000532038
  gene symbol: ARHGAP27
  hgvsc: ENST00000532038.1:c.1286-51G>T
  variant of: http://identifiers.org/hgnc/31813
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159314
  ensembl protein: ENSP00000433942
  ensembl transcript: ENST00000532891
  gene symbol: ARHGAP27
  hgvsc: ENST00000532891.2:c.1886-51G>T
  variant of: http://identifiers.org/hgnc/31813
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21406
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3630
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12074
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
reference allele: C

GenotypeQuality
all individuals: 449
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4023
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 484
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.20889748549323e-3
allele num: 8272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

QD
type: SiteQuality
SIO_000300: 1.432e1

FS
type: SiteQuality
SIO_000300: 5.963e0

VQSLOD
type: SiteQuality
SIO_000300: 5.43e-1

DP
type: SiteQuality
SIO_000300: 1.329366e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.955758552749418e-5
allele num: 11166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.619905397524785e-5
allele num: 61732
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.963e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

DP
type: SiteQuality
SIO_000300: 1.329366e6

QD
type: SiteQuality
SIO_000300: 1.432e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

GenotypeQuality
all individuals: 747
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 321
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4339
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608078988839932e-5
allele num: 62186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.085e0

QD
type: SiteQuality
SIO_000300: 6.39e0

FS
type: SiteQuality
SIO_000300: 3.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

DP
type: SiteQuality
SIO_000300: 1.338667e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.44e-1

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.202501202501203e-4
allele num: 8316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.829e0

VQSLOD
type: SiteQuality
SIO_000300: -1.876e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 1.342842e6

QD
type: SiteQuality
SIO_000300: 1.709e1

GenotypeQuality
all individuals: 4394
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.601383595426448e-5
allele num: 62446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5702
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.726e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

FS
type: SiteQuality
SIO_000300: 8.906000000000001e0

QD
type: SiteQuality
SIO_000300: 1.571e1

MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.345246e6

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4495
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13421666053245e-5
allele num: 16302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.176922832544397e-5
allele num: 62954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.877840909090909e-5
allele num: 11264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5820
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.79e-1

DP
type: SiteQuality
SIO_000300: 1.35577e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.267e0

QD
type: SiteQuality
SIO_000300: 1.204e1

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 1

GenotypeQuality
all individuals: 134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
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variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2994
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588612823282709e-5
allele num: 62948
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

DP
type: SiteQuality
SIO_000300: 1.360604e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

GenotypeQuality
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2994
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 82
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13195977434388e-5
allele num: 16308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.531676939696257e-5
allele num: 62948
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 1.360604e6

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

MQ
type: SiteQuality
SIO_000300: 5.986e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 48166
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4486
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 365
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 79
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 177
bin: 5.25e1
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GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2930
bin: 2.25e1
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GenotypeQuality
all individuals: 502
bin: 9.75e1
variant carriers: 451

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 8.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.225790634959549e-4
allele num: 16316
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 7.228915662650603e-3
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 47
allele frequency: 4.164451532872586e-3
allele num: 11286
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.196458482890644e-4
allele num: 8358
num of homozygotes: 0

African
type: Population
allele count: 269
allele frequency: 3.024510906228918e-2
allele num: 8894
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 138
allele frequency: 2.186588921282799e-3
allele num: 63112
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.876e0

DP
type: SiteQuality
SIO_000300: 1.376233e6

QD
type: SiteQuality
SIO_000300: 1.274e1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
all individuals: 222
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
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GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577834579822651e-5
allele num: 63378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11290
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.366098e6

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

QD
type: SiteQuality
SIO_000300: 1.085e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.482e0

GenotypeQuality
all individuals: 115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2698
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variant carriers: 0

GenotypeQuality
all individuals: 49030
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 323
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variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 935
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.112594570538496e-4
allele num: 8988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57035175879397e-5
allele num: 63680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

DP
type: SiteQuality
SIO_000300: 1.370736e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.481e0

QD
type: SiteQuality
SIO_000300: 1.123e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.56e-1

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
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GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 49069
bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 105
bin: 9.75e1
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GenotypeQuality
all individuals: 316
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GenotypeQuality
all individuals: 754
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variant carriers: 0

GenotypeQuality
all individuals: 326
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.112469437652811e-5
allele num: 16360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569710859259724e-5
allele num: 63706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.927e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

QD
type: SiteQuality
SIO_000300: 1.205e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 1.372335e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

GenotypeQuality
all individuals: 49069
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
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GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
all individuals: 2648
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GenotypeQuality
all individuals: 754
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variant carriers: 0

GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 105
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variant carriers: 3

GenotypeQuality
all individuals: 4596
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variant carriers: 0

GenotypeQuality
all individuals: 326
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variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 203
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variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.833740831295844e-4
allele num: 16360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

DP
type: SiteQuality
SIO_000300: 1.372335e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.5e0
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GenotypeQuality
all individuals: 49228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 305
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variant carriers: 0

GenotypeQuality
all individuals: 82
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GenotypeQuality
all individuals: 2574
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 4599
bin: 6.75e1
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 761
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GenotypeQuality
all individuals: 931
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566710534561634e-5
allele num: 63828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.0531e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

QD
type: SiteQuality
SIO_000300: 1.293e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.37441e6

VQSLOD
type: SiteQuality
SIO_000300: -2.257e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeQuality
all individuals: 2574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 761
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GenotypeQuality
all individuals: 49228
bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 128
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GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.10938540048813e-4
allele num: 9014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -2.257e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.293e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 2.0531e1

DP
type: SiteQuality
SIO_000300: 1.37441e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 4682
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GenotypeQuality
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GenotypeQuality
all individuals: 368
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 773
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GenotypeQuality
all individuals: 72
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GenotypeQuality
all individuals: 2190
bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 943
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GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553180914512922e-5
allele num: 64384
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.941e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.01e0

DP
type: SiteQuality
SIO_000300: 1.383699e6

VQSLOD
type: SiteQuality
SIO_000300: -1.13e0

ReadPosRankSum
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SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 1.101e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.086720278200391e-4
allele num: 9202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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QD
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: 3.0e-3

MQRankSum
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BaseQRankSum
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SIO_000300: -1.017e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.386039e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.548898733000836e-5
allele num: 64562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
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SIO_000300: 1.3875e6

FS
type: SiteQuality
SIO_000300: 9.191000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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VQSLOD
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SIO_000300: -1.82e-2

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.23e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536428725071444e-5
allele num: 65086
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.886e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.65e0

DP
type: SiteQuality
SIO_000300: 1.397484e6

VQSLOD
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SIO_000300: -5.961e-1

ReadPosRankSum
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SIO_000300: 1.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 7.85e-1

InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 9.43e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.534636751480924e-5
allele num: 65162
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.421e1

FS
type: SiteQuality
SIO_000300: 3.953e0

VQSLOD
type: SiteQuality
SIO_000300: -2.283e-1

ReadPosRankSum
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SIO_000300: -1.711e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

DP
type: SiteQuality
SIO_000300: 1.398845e6

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.55e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65344
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6268
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.538e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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FS
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.843e1

ClippingRankSum
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SIO_000300: 1.52e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527650473571647e-5
allele num: 65460
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 16484
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele num: 9470
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65486
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South Asian
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allele frequency: 0.0e0
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VQSLOD
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QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele frequency: 8.755034144633164e-5
allele num: 11422
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65630
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16478
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East Asian
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allele frequency: 0.0e0
allele num: 8520
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.884e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

VQSLOD
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SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.082e1

DP
type: SiteQuality
SIO_000300: 1.406413e6

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.079e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9530
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.043398867855621e-5
allele num: 65716
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
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DP
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SIO_000300: 1.40773e6

MQRankSum
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SIO_000300: -1.01e-1

InbreedingCoeff
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ClippingRankSum
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SIO_000300: 2.89e-1

QD
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FS
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
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SIO_000300: -1.671e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65776
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.047339757017176e-4
allele num: 9548
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.521e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 1.078e1

MQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.938e1

DP
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 1.518e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.089392278650591e-5
allele num: 16422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.395854e6

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.072e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526111772426212e-5
allele num: 65526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

FS
type: SiteQuality
SIO_000300: 1.152e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e0

VQSLOD
type: SiteQuality
SIO_000300: -7.346e-1

QD
type: SiteQuality
SIO_000300: 9.09e0

DP
type: SiteQuality
SIO_000300: 1.395779e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525832341542311e-5
allele num: 65538
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.77e0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527090587013621e-5
allele num: 65484
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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QD
type: SiteQuality
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DP
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MQ
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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DP
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele count: 1
allele frequency: 8.80126738250308e-5
allele num: 11362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
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BaseQRankSum
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SIO_000300: 5.55e-1

ClippingRankSum
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SIO_000300: 3.49e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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VQSLOD
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SIO_000300: 1.99e0

DP
type: SiteQuality
SIO_000300: 1.394107e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65430
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9466
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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VQSLOD
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64890
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9352
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6094
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.185677021579322e-4
allele num: 8434
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South Asian
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allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

BaseQRankSum
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DP
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SIO_000300: 1.363839e6

InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.144e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.130456105934282e-5
allele num: 16312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6074
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.545308443565336e-5
allele num: 64712
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 1.363784e6

VQSLOD
type: SiteQuality
SIO_000300: 2.36e-1

FS
type: SiteQuality
SIO_000300: 1.277e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.575e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64620
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.384927259718579e-4
allele num: 8386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.35e-1

MQRankSum
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FS
type: SiteQuality
SIO_000300: 3.645e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

DP
type: SiteQuality
SIO_000300: 1.350529e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.685e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.192463629859289e-4
allele num: 8386
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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South Asian
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.563966218329684e-5
allele num: 63940
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -3.261e0

InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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Latino
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QD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11028
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.223990208078335e-4
allele num: 8170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63044
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.15e-1

QD
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SIO_000300: 7.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.106e0

VQSLOD
type: SiteQuality
SIO_000300: -7.936e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

FS
type: SiteQuality
SIO_000300: 8.391e0

DP
type: SiteQuality
SIO_000300: 1.264696e6

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.591444394932841e-5
allele num: 62836
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.822821728034998e-4
allele num: 10972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.249767e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

FS
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.51e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.328e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.638001638001638e-5
allele num: 61050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.036e1

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

MQ
type: SiteQuality
SIO_000300: 6.042e1

FS
type: SiteQuality
SIO_000300: 3.173e0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 1.176078e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.29009938357026e-5
allele num: 15898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7972
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.036e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

DP
type: SiteQuality
SIO_000300: 1.176078e6

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 3.173e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.042e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 553
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.291097581043278e-5
allele num: 60770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.389e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.925e-1

DP
type: SiteQuality
SIO_000300: 1.167478e6

QD
type: SiteQuality
SIO_000300: 6.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.658649859014762e-5
allele num: 60290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.194e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

QD
type: SiteQuality
SIO_000300: 2.856e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.521995810321844e-5
allele num: 10502
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 8.375209380234506e-4
allele num: 8358
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.231e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.093755e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.587e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 4
allele frequency: 7.272727272727272e-4
allele num: 5500
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

DP
type: SiteQuality
SIO_000300: 1.09348e6

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.096e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

QD
type: SiteQuality
SIO_000300: 1.641e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 105
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variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.402113860196973e-4
allele num: 8326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59124
num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.086689e6

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

FS
type: SiteQuality
SIO_000300: 1.2015e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15672
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.714677640603567e-5
allele num: 58320
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.151e0

InbreedingCoeff
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.062711e6

ClippingRankSum
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SIO_000300: -1.888e0

MQ
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SIO_000300: 5.914e1

BaseQRankSum
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SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.128e1

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7642
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.436071882623784e-5
allele num: 58206
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5308
num of homozygotes: 0

South Asian
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allele frequency: 6.39386189258312e-5
allele num: 15640
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.219809709685289e-4
allele num: 8198
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10312
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

FS
type: SiteQuality
SIO_000300: 1.322e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5264
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.416837782340863e-5
allele num: 15584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57904
num of homozygotes: 0

African
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allele count: 4
allele frequency: 4.895960832313342e-4
allele num: 8170
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

QD
type: SiteQuality
SIO_000300: 1.63e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 1.636e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: -2.568e-1

DP
type: SiteQuality
SIO_000300: 1.050895e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.723781286630352e-5
allele num: 58012
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.516e1

DP
type: SiteQuality
SIO_000300: 1.050333e6

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.88e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

VQSLOD
type: SiteQuality
SIO_000300: -1.132e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.724613686534216e-5
allele num: 57984
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: -2.371e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

DP
type: SiteQuality
SIO_000300: 1.045881e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

South Asian
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allele frequency: 6.476683937823834e-5
allele num: 15440
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 56668
num of homozygotes: 0

East Asian
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MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.04e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
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DP
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FS
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.352813852813853e-4
allele num: 7392
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.982561036372695e-4
allele num: 8028
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5074
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 56634
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Other
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allele num: 728
num of homozygotes: 0

QD
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
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VQSLOD
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MQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 2.19e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5138
num of homozygotes: 0

Latino
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.519639588906096e-5
allele num: 56824
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African
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Other
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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SIO_000300: 6.15e-1

ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7368
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
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South Asian
type: Population
allele count: 1
allele frequency: 6.512112529304507e-5
allele num: 15356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56310
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

QD
type: SiteQuality
SIO_000300: 7.41e0

DP
type: SiteQuality
SIO_000300: 1.01309e6

FS
type: SiteQuality
SIO_000300: 8.824999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.369e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1909
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13701
bin: 2.25e1
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GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.794752144728813e-5
allele num: 55718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

DP
type: SiteQuality
SIO_000300: 1.006585e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
all individuals: 1880
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.791536780250098e-5
allele num: 55818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

FS
type: SiteQuality
SIO_000300: 5.464e0

DP
type: SiteQuality
SIO_000300: 1.006861e6

MQRankSum
type: SiteQuality
SIO_000300: 8.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

QD
type: SiteQuality
SIO_000300: 1.534e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15272
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.141358365543898e-4
allele num: 7244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.017293997965412e-4
allele num: 9830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4990
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

FS
type: SiteQuality
SIO_000300: 5.464e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

DP
type: SiteQuality
SIO_000300: 1.006861e6

QD
type: SiteQuality
SIO_000300: 1.534e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15600
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2031
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variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.792243171553516e-5
allele num: 55796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5018
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

DP
type: SiteQuality
SIO_000300: 1.009029e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.678e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.667e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.008e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.214e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.800309653260361e-5
allele num: 55546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.374e-1

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.011321e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.582411795681937e-5
allele num: 15192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55328
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.055e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.84e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.013804e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

QD
type: SiteQuality
SIO_000300: 5.04e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 320
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.802321389950256e-5
allele num: 55484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7184
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.018802e6

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.588e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.397428731134712e-4
allele num: 7156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.803686735687746e-5
allele num: 55442
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 113
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variant carriers: 2

GenotypeQuality
all individuals: 814
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.584486343107033e-5
allele num: 55796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

QD
type: SiteQuality
SIO_000300: 8.380000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.778e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.044856e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

GenotypeQuality
all individuals: 4728
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2878
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1471
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19129
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1288
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 1529
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.355013550135501e-3
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15236
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 3.353293413173653e-3
allele num: 8350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7230
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.644e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.87e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.059163e6

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

GenotypeQuality
all individuals: 3824
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5513
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.768158992856638e-5
allele num: 56556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.741e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.275e0

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

VQSLOD
type: SiteQuality
SIO_000300: -1.829e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.425e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

FS
type: SiteQuality
SIO_000300: 1.949e0

DP
type: SiteQuality
SIO_000300: 1.092864e6

QD
type: SiteQuality
SIO_000300: 1.584e1

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22256
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3944
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3561
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0