21-34903875-ATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903875
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903873
    reference: chr 21
allele count: 7253
allele frequency: 9.403604304421108e-2
allele num: 77130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-14_585-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-14_165-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-14_214-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-14_529-13delAA
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 1788
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 337
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 5.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 2.25e1
  variant carriers: 2618
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 1.75e1
  variant carriers: 2934
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.75e1
  variant carriers: 1637
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 359
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 3.25e1
  variant carriers: 769
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 4.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 4.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 5.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 4965
  bin: 2.25e1
  variant carriers: 666
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 6.75e1
  variant carriers: 329
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 5.75e1
  variant carriers: 384
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: ATT
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

21-34903875-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903875
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903876
    reference: chr 21
allele count: 2500
allele frequency: 3.241280954233113e-2
allele num: 77130
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-13dupA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-13dupA
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 3.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.75e1
  variant carriers: 334
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 4.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 1.75e1
  variant carriers: 1139
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 774
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 4.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 1351
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 2.25e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 1.25e1
  variant carriers: 412
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 3.25e1
  variant carriers: 348
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 8.75e1
  variant carriers: 44
num of homozygotes: 3
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

21-34903875-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903875
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903877
    reference: chr 21
allele count: 178
allele frequency: 2.307792039413976e-3
allele num: 77130
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-14_214-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-14_165-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-14_585-13dupAA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-14_529-13dupAA
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 1.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 2.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 6.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 3.75e1
  variant carriers: 19
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

21-34903875-ATTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903875
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903872
    reference: chr 21
allele count: 631
allele frequency: 8.180993128484377e-3
allele num: 77130
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 3.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 4.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 1.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 2.25e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 3.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 3.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 1.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 4.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 5.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 2.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 9.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 6.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 8.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 7755
  bin: 2.5e0
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 4965
  bin: 2.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 4482
  bin: 7.5e0
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 1.25e1
  variant carriers: 96
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 5.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 6.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 4956
  bin: 9.75e1
  variant carriers: 128
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 4.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 7.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 7.25e1
  variant carriers: 25
num of homozygotes: 0
population: African
  type: Population
  allele count: 28
  allele frequency: 5.074302283436027e-3
  allele num: 5518
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 48
  allele frequency: 1.050788091068301e-2
  allele num: 4568
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 81
  allele frequency: 7.82759953614225e-3
  allele num: 10348
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 56
  allele frequency: 7.48663101604278e-3
  allele num: 7480
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: ATTT
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

21-34903875-ATTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903875
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903870
    reference: chr 21
allele count: 777
allele frequency: 1.007390120575652e-2
allele num: 77130
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.75e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 1.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 2.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 3.25e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 4.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 5.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 4.25e1
  variant carriers: 108
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 4.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 4956
  bin: 9.75e1
  variant carriers: 502
genotype quality: GenotypeQuality
  all individuals: 4965
  bin: 2.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 5.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 4.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 6.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 3.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 2.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 5.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 1.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 1.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 3.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4482
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 7755
  bin: 2.5e0
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 7.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 6.75e1
  variant carriers: 11
num of homozygotes: 11
population: European (Finnish)
  type: Population
  allele count: 105
  allele frequency: 2.298598949211909e-2
  allele num: 4568
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 52
  allele frequency: 6.951871657754011e-3
  allele num: 7480
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 572
  allele frequency: 1.324748714623188e-2
  allele num: 43178
  num of homozygotes: 10
population: African
  type: Population
  allele count: 11
  allele frequency: 1.993475897064154e-3
  allele num: 5518
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
reference allele: ATTTTT
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

21-34903876-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903876
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903876
    reference: chr 21
allele count: 17
allele frequency: 1.786089514603908e-3
allele num: 9518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-13A>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3183
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 2.75e1
  variant carriers: 5
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

21-34903876-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903876
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903876
    reference: chr 21
allele count: 5
allele frequency: 5.253204454717378e-4
allele num: 9518
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-13A>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

21-34903877-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903877
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903877
    reference: chr 21
allele count: 4
allele frequency: 9.804402176577283e-5
allele num: 40798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-14A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-14A>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

21-34903878-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903878
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903878
    reference: chr 21
allele count: 1
allele frequency: 1.098418277680141e-5
allele num: 91040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-15A>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

21-34903881-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903881
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903882
    reference: chr 21
allele count: 4
allele frequency: 3.508648819339672e-5
allele num: 114004
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-19_585-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-19_165-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-19_214-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-19_529-18insG
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8071
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14605
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

21-34903883-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903883
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903884
    reference: chr 21
allele count: 39
allele frequency: 3.36741037507771e-4
allele num: 115816
alternate allele: TG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-21_585-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-21_165-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-21_214-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-21_529-20insC
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8210
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

21-34903884-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903884
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903884
    reference: chr 21
allele count: 75
allele frequency: 6.481833581083417e-4
allele num: 115708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-21A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-21A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 2.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8239
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD

21-34903895-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903895
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903895
    reference: chr 21
allele count: 61
allele frequency: 9.601460681231505e-4
allele num: 63532
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5975
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4108
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2134
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21888
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 9.75e1
  variant carriers: 24
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 2
  allele frequency: 4.71253534401508e-4
  allele num: 4244
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 4
  allele frequency: 6.404098623118795e-4
  allele num: 6246
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3784
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 42
  allele frequency: 4.284839828606407e-3
  allele num: 9802
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

21-34903895-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903895
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903896
    reference: chr 21
allele count: 48
allele frequency: 7.555247749165775e-4
allele num: 63532
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-33dupT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-33dupT
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5975
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

21-34903895-T-TTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903895
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903897
    reference: chr 21
allele count: 8
allele frequency: 1.259207958194296e-4
allele num: 63532
alternate allele: TTA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-33_585-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-33_165-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-33_529-32insTA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-33_214-32insTA
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4108
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

21-34903895-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903895
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903894
    reference: chr 21
allele count: 482
allele frequency: 7.586727948120632e-3
allele num: 63532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-33delT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-33delT
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 1.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 3.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 2.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 2.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 3.75e1
  variant carriers: 10
num of homozygotes: 10
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: TA
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

21-34903895-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903895
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903893
    reference: chr 21
allele count: 4
allele frequency: 6.296039790971479e-5
allele num: 63532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-34_214-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-34_165-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-34_529-33delTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-34_585-33delTT
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: TAA
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

21-34903896-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903896
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903896
    reference: chr 21
allele count: 167
allele frequency: 1.747117778754211e-3
allele num: 95586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-33T>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10623
  bin: 2.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 11780
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 5803
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 2.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 9.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 2.75e1
  variant carriers: 10
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

21-34903897-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903897
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903897
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 108748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-34T>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17949
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

21-34903898-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903898
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903898
    reference: chr 21
allele count: 9
allele frequency: 8.132138210206737e-5
allele num: 110672
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-35T>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13239
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13717
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

21-34903907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34903907
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34903907
    reference: chr 21
allele count: 95
allele frequency: 8.787508787508788e-4
allele num: 108108
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.214-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.585-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.165-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.529-44G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11450
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10216
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 1
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

21-34904604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904604
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904604
    reference: chr 21
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.253T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+47T>C
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13949
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

21-34904612-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904612
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904612
    reference: chr 21
allele count: 4
allele frequency: 3.311916274756574e-5
allele num: 120776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.245A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+39A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13948
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

21-34904614-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904614
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904614
    reference: chr 21
allele count: 1
allele frequency: 8.278556881964336e-6
allele num: 120794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.243T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+37T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+37T>C
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

21-34904618-G-GAAAAGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904618
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904624
    reference: chr 21
allele count: 5
allele frequency: 4.138524698715402e-5
allele num: 120816
alternate allele: GAAAAGT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+27_213+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.233_238dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+27_584+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+27_528+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+27_164+32dupACTTTT
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13945
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

21-34904624-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904624
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904624
    reference: chr 21
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.233A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+27A>T
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13940
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

21-34904627-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904627
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904626
    reference: chr 21
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.229delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+23delA
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+23delA
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: AT
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

21-34904633-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904633
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904633
    reference: chr 21
allele count: 9
allele frequency: 7.439861122592379e-5
allele num: 120970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.224A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+18A>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+18A>T
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13939
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5287
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/21-34904641-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904641
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904641
    reference: chr 21
allele count: 2
allele frequency: 1.650491846570278e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.216G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+10G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+10G>T
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13938
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48735
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

21-34904641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904641
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904641
    reference: chr 21
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.216G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+10G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/21-34904646-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904646
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904646
    reference: chr 21
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.211G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213+5G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528+5G>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13937
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.528+5G>T
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

21-34904651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904651
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904651
    reference: chr 21
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.528G>A
  hgvsp: ENST00000361093.5:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.528G>A
  hgvsp: ENST00000381831.3:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.206G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.584G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.164G>A
  hgvsp: ENST00000366093.2:c.164G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.213G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.528G>A
  hgvsp: ENST00000426819.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.528G>A
  hgvsp: ENST00000430874.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.528G>A
  hgvsp: ENST00000381839.3:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.528G>A
  hgvsp: ENST00000424203.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.528G>A
  hgvsp: ENST00000381815.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.528G>A
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

21-34904655-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904655
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904655
    reference: chr 21
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.524T>C
  hgvsp: ENSP00000371253.3:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.580T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.524T>C
  hgvsp: ENSP00000390003.1:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.524T>C
  hgvsp: ENSP00000398631.1:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.209T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.524T>C
  hgvsp: ENSP00000371236.4:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.202T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.524T>C
  hgvsp: ENSP00000371261.3:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.160T>C
  hgvsp: ENSP00000409771.1:p.Met54Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.524T>C
  hgvsp: ENSP00000354388.5:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.524T>C
  hgvsp: ENSP00000413040.1:p.Met175Thr
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13937
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met175Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

21-34904661-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904661
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904661
    reference: chr 21
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.154A>G
  hgvsp: ENSP00000409771.1:p.Glu52Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.518A>G
  hgvsp: ENSP00000371253.3:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.574A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.518A>G
  hgvsp: ENSP00000398631.1:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.518A>G
  hgvsp: ENSP00000371236.4:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.518A>G
  hgvsp: ENSP00000371261.3:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.196A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.518A>G
  hgvsp: ENSP00000354388.5:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.518A>G
  hgvsp: ENSP00000413040.1:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.518A>G
  hgvsp: ENSP00000390003.1:p.Glu173Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.203A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13936
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu173Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum

21-34904665-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904665
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904665
    reference: chr 21
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.514C>A
  hgvsp: ENSP00000371236.4:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.514C>A
  hgvsp: ENSP00000354388.5:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.514C>A
  hgvsp: ENSP00000398631.1:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.514C>A
  hgvsp: ENSP00000413040.1:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.570C>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.514C>A
  hgvsp: ENSP00000371261.3:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.199C>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.514C>A
  hgvsp: ENSP00000390003.1:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.192C>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.150C>A
  hgvsp: ENSP00000409771.1:p.Gln51Lys
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.514C>A
  hgvsp: ENSP00000371253.3:p.Gln172Lys
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13936
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln172Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

21-34904666-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904666
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904666
    reference: chr 21
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.513A>G
  hgvsp: ENST00000381815.4:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.513A>G
  hgvsp: ENST00000426819.1:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.149A>G
  hgvsp: ENST00000366093.2:c.149A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.513A>G
  hgvsp: ENST00000430874.1:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.513A>G
  hgvsp: ENST00000381831.3:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.198A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.513A>G
  hgvsp: ENST00000381839.3:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.191A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.569A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.513A>G
  hgvsp: ENST00000361093.5:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.513A>G
  hgvsp: ENST00000424203.1:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13935
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val171Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

21-34904676-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904676
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904676
    reference: chr 21
allele count: 2
allele frequency: 1.647853670594051e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.503G>A
  hgvsp: ENSP00000398631.1:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.503G>A
  hgvsp: ENSP00000371236.4:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.503G>A
  hgvsp: ENSP00000371261.3:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.139G>A
  hgvsp: ENSP00000409771.1:p.Cys47Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.559G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.503G>A
  hgvsp: ENSP00000371253.3:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.503G>A
  hgvsp: ENSP00000390003.1:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.503G>A
  hgvsp: ENSP00000354388.5:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.188G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.181G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.503G>A
  hgvsp: ENSP00000413040.1:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys168Tyr
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

21-34904685-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904685
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904685
    reference: chr 21
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.130A>G
  hgvsp: ENSP00000409771.1:p.Glu44Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.494A>G
  hgvsp: ENSP00000390003.1:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.494A>G
  hgvsp: ENSP00000371236.4:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.494A>G
  hgvsp: ENSP00000398631.1:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.494A>G
  hgvsp: ENSP00000354388.5:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.494A>G
  hgvsp: ENSP00000371253.3:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.494A>G
  hgvsp: ENSP00000371261.3:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.494A>G
  hgvsp: ENSP00000413040.1:p.Glu165Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.179A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.172A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.550A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13934
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu165Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

21-34904695-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904695
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904695
    reference: chr 21
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.484A>G
  hgvsp: ENSP00000371236.4:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.484A>G
  hgvsp: ENSP00000371261.3:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.484A>G
  hgvsp: ENSP00000398631.1:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.540A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.120A>G
  hgvsp: ENSP00000409771.1:p.Lys41Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.169A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.484A>G
  hgvsp: ENSP00000371253.3:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.484A>G
  hgvsp: ENSP00000413040.1:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.484A>G
  hgvsp: ENSP00000354388.5:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.484A>G
  hgvsp: ENSP00000390003.1:p.Lys162Glu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.162A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13934
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys162Glu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

21-34904697-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904697
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904697
    reference: chr 21
allele count: 80
allele frequency: 6.590111537637775e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.482C>G
  hgvsp: ENSP00000371253.3:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.167C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.482C>G
  hgvsp: ENSP00000371261.3:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.538C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.482C>G
  hgvsp: ENSP00000354388.5:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.482C>G
  hgvsp: ENSP00000413040.1:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.160C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.482C>G
  hgvsp: ENSP00000371236.4:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.482C>G
  hgvsp: ENSP00000390003.1:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.482C>G
  hgvsp: ENSP00000398631.1:p.Ala161Gly
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.118C>G
  hgvsp: ENSP00000409771.1:p.Ala40Gly
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13946
  bin: 9.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
hgvs: p.Ala161Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

21-34904698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904698
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904698
    reference: chr 21
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.481G>A
  hgvsp: ENSP00000354388.5:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.481G>A
  hgvsp: ENSP00000371261.3:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.481G>A
  hgvsp: ENSP00000371253.3:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.481G>A
  hgvsp: ENSP00000398631.1:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.117G>A
  hgvsp: ENSP00000409771.1:p.Ala40Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.481G>A
  hgvsp: ENSP00000371236.4:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.159G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.537G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.481G>A
  hgvsp: ENSP00000413040.1:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.481G>A
  hgvsp: ENSP00000390003.1:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.166G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala161Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/21-34904708-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904708
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904708
    reference: chr 21
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.471G>T
  hgvsp: ENST00000430874.1:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.527G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.471G>T
  hgvsp: ENST00000361093.5:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.149G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.471G>T
  hgvsp: ENST00000381815.4:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.471G>T
  hgvsp: ENST00000426819.1:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.471G>T
  hgvsp: ENST00000381839.3:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.471G>T
  hgvsp: ENST00000381831.3:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.471G>T
  hgvsp: ENST00000424203.1:c.471G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.156G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.107G>T
  hgvsp: ENST00000366093.2:c.107G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13896
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly157Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/21-34904709-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904709
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904709
    reference: chr 21
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.470G>T
  hgvsp: ENSP00000413040.1:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.106G>T
  hgvsp: ENSP00000409771.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.470G>T
  hgvsp: ENSP00000371261.3:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.470G>T
  hgvsp: ENSP00000371253.3:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.470G>T
  hgvsp: ENSP00000354388.5:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.155G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.148G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.526G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.470G>T
  hgvsp: ENSP00000398631.1:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.470G>T
  hgvsp: ENSP00000390003.1:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.470G>T
  hgvsp: ENSP00000371236.4:p.Gly157Val
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13893
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly157Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/21-34904719-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904719
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904719
    reference: chr 21
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.145G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.516G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.460G>T
  hgvsp: ENSP00000390003.1:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.460G>T
  hgvsp: ENSP00000354388.5:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.96G>T
  hgvsp: ENSP00000409771.1:p.Ala33Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.460G>T
  hgvsp: ENSP00000413040.1:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.460G>T
  hgvsp: ENSP00000371261.3:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.138G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.460G>T
  hgvsp: ENSP00000398631.1:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.460G>T
  hgvsp: ENSP00000371236.4:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.460G>T
  hgvsp: ENSP00000371253.3:p.Ala154Ser
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala154Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

21-34904724-AGAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904724
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904721
    reference: chr 21
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.130_132delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.508_510delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.88_90delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.452_454delGTC
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.137_139delGTC
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13890
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly151_Leu152delinsVal
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: AGAC
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

21-34904727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904727
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904727
    reference: chr 21
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.452G>A
  hgvsp: ENSP00000371236.4:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.508G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.452G>A
  hgvsp: ENSP00000398631.1:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.452G>A
  hgvsp: ENSP00000390003.1:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.137G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.452G>A
  hgvsp: ENSP00000354388.5:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.88G>A
  hgvsp: ENSP00000409771.1:p.Gly30Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.452G>A
  hgvsp: ENSP00000371253.3:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.130G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.452G>A
  hgvsp: ENSP00000371261.3:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.452G>A
  hgvsp: ENSP00000413040.1:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13890
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly151Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

21-34904751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904751
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904751
    reference: chr 21
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.64C>T
  hgvsp: ENSP00000409771.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.428C>T
  hgvsp: ENSP00000398631.1:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.106C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.428C>T
  hgvsp: ENSP00000371253.3:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.428C>T
  hgvsp: ENSP00000371261.3:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.428C>T
  hgvsp: ENSP00000371236.4:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.428C>T
  hgvsp: ENSP00000413040.1:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.484C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.428C>T
  hgvsp: ENSP00000390003.1:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.428C>T
  hgvsp: ENSP00000354388.5:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.113C>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13890
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro143Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

21-34904759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904759
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904759
    reference: chr 21
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.420A>G
  hgvsp: ENST00000381831.3:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.420A>G
  hgvsp: ENST00000426819.1:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.420A>G
  hgvsp: ENST00000424203.1:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.105A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.56A>G
  hgvsp: ENST00000366093.2:c.56A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.420A>G
  hgvsp: ENST00000381839.3:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.420A>G
  hgvsp: ENST00000381815.4:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.98A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.420A>G
  hgvsp: ENST00000361093.5:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.476A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.420A>G
  hgvsp: ENST00000430874.1:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala140Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

21-34904764-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904764
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904764
    reference: chr 21
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-2A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-2A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5460
  bin: 6.25e1
  variant carriers: 0
hgvs: c.417-2A>G
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

21-34904765-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904765
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904765
    reference: chr 21
allele count: 2
allele frequency: 1.649865535958819e-5
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-3C>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13888
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.417-3C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

21-34904772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904772
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904772
    reference: chr 21
allele count: 2
allele frequency: 1.650764303872693e-5
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-10G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-10G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

21-34904773-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904773
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904773
    reference: chr 21
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-11T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-11T>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

21-34904774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904774
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904774
    reference: chr 21
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-12C>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

21-34904781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904781
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904781
    reference: chr 21
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-19G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-19G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

21-34904782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904782
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904782
    reference: chr 21
allele count: 2
allele frequency: 1.652237129072764e-5
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-20C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-20C>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

21-34904782-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904782
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904782
    reference: chr 21
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-20C>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-20C>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/21-34904786-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904786
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904786
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 121010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-24T>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13885
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff

21-34904793-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904793
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904793
    reference: chr 21
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-31T>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-31T>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS

21-34904795-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904795
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904795
    reference: chr 21
allele count: 7
allele frequency: 5.790483753557011e-5
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-33T>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-33T>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/21-34904796-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904796
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904796
    reference: chr 21
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-34T>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13881
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4091
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/21-34904798-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904798
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904798
    reference: chr 21
allele count: 1
allele frequency: 8.273899157717065e-6
allele num: 120862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-36G>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-36G>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13881
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

21-34904801-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904801
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904801
    reference: chr 21
allele count: 115
allele frequency: 9.520970973457189e-4
allele num: 120786
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-39A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13878
  bin: 9.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3971
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

21-34904802-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904802
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904802
    reference: chr 21
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-40A>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13853
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

21-34904804-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904804
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904804
    reference: chr 21
allele count: 2
allele frequency: 1.656506758547575e-5
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-42G>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-42G>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13852
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/21-34904811-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904811
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904811
    reference: chr 21
allele count: 3
allele frequency: 2.487314695055218e-5
allele num: 120612
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-49T>G
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13852
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

21-34904812-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34904812
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34904812
    reference: chr 21
allele count: 1
allele frequency: 8.291873963515755e-6
allele num: 120600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.473-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.95-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.53-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.417-50C>T
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.102-50C>T
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13852
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

21-34906842-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34906842
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34906842
    reference: chr 21
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.101+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.472+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.416+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.94+43A>C
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.52+43A>C
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

21-34906853-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34906853
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34906853
    reference: chr 21
allele count: 8
allele frequency: 6.622955162593549e-5
allele num: 120792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.52+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.94+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.101+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.472+32G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.416+32G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

21-34906861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34906861
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 34906861
    reference: chr 21
allele count: 1
allele frequency: 8.265282507356101e-6
allele num: 120988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000488791
  gene symbol: GART
  hgvsc: ENST00000488791.1:n.94+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371261
  ensembl transcript: ENST00000381839
  gene symbol: GART
  hgvsc: ENST00000381839.3:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000497313
  gene symbol: GART
  hgvsc: ENST00000497313.1:n.101+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000398631
  ensembl transcript: ENST00000426819
  gene symbol: GART
  hgvsc: ENST00000426819.1:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000409771
  ensembl transcript: ENST00000366093
  gene symbol: GART
  hgvsc: ENST00000366093.2:c.52+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000354388
  ensembl transcript: ENST00000361093
  gene symbol: GART
  hgvsc: ENST00000361093.5:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl transcript: ENST00000476524
  gene symbol: GART
  hgvsc: ENST00000476524.1:n.472+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000413040
  ensembl transcript: ENST00000430874
  gene symbol: GART
  hgvsc: ENST00000430874.1:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371253
  ensembl transcript: ENST00000381831
  gene symbol: GART
  hgvsc: ENST00000381831.3:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000390003
  ensembl transcript: ENST00000424203
  gene symbol: GART
  hgvsc: ENST00000424203.1:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000159131
  ensembl protein: ENSP00000371236
  ensembl transcript: ENST00000381815
  gene symbol: GART
  hgvsc: ENST00000381815.4:c.416+24G>A
  variant of: http://identifiers.org/hgnc/4163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25912
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 940
bin: 8.75e1
variant carriers: 225

GenotypeQuality
all individuals: 3239
bin: 1.75e1
variant carriers: 807

GenotypeQuality
all individuals: 1409
bin: 7.75e1
variant carriers: 283

GenotypeQuality
all individuals: 4482
bin: 7.5e0
variant carriers: 881

GenotypeQuality
all individuals: 1120
bin: 8.25e1
variant carriers: 263

GenotypeQuality
all individuals: 3626
bin: 2.75e1
variant carriers: 637

GenotypeQuality
all individuals: 7755
bin: 2.5e0
variant carriers: 725

GenotypeQuality
all individuals: 3461
bin: 1.25e1
variant carriers: 870

GenotypeQuality
all individuals: 2248
bin: 6.25e1
variant carriers: 369

GenotypeQuality
all individuals: 2947
bin: 4.75e1
variant carriers: 466

GenotypeQuality
all individuals: 2914
bin: 4.25e1
variant carriers: 477

GenotypeQuality
all individuals: 845
bin: 9.25e1
variant carriers: 206

GenotypeQuality
all individuals: 4956
bin: 9.75e1
variant carriers: 1308

GenotypeQuality
all individuals: 3686
bin: 3.75e1
variant carriers: 571

GenotypeQuality
all individuals: 4038
bin: 3.25e1
variant carriers: 597

GenotypeQuality
all individuals: 2492
bin: 5.25e1
variant carriers: 399

GenotypeQuality
all individuals: 1391
bin: 7.25e1
variant carriers: 297

Latino
type: Population
allele count: 757
allele frequency: 1.012032085561497e-1
allele num: 7480
num of homozygotes: 0

South Asian
type: Population
allele count: 820
allele frequency: 7.924236567452649e-2
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 652
allele frequency: 1.427320490367776e-1
allele num: 4568
num of homozygotes: 0

African
type: Population
allele count: 333
allele frequency: 6.034795215657847e-2
allele num: 5518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4054
allele frequency: 9.389040715179027e-2
allele num: 43178
num of homozygotes: 0

East Asian
type: Population
allele count: 579
allele frequency: 1.061217008797654e-1
allele num: 5456
num of homozygotes: 0

Other
type: Population
allele count: 58
allele frequency: 9.965635738831616e-2
allele num: 582
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.540984e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 3.05e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQ
type: SiteQuality
SIO_000300: 5.81e1

FS
type: SiteQuality
SIO_000300: 9.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

GenotypeQuality
all individuals: 2053
bin: 5.75e1
variant carriers: 205

GenotypeQuality
all individuals: 7755
bin: 2.5e0
variant carriers: 492

GenotypeQuality
all individuals: 1391
bin: 7.25e1
variant carriers: 62

GenotypeQuality
all individuals: 2492
bin: 5.25e1
variant carriers: 179

GenotypeQuality
all individuals: 3626
bin: 2.75e1
variant carriers: 326

GenotypeQuality
all individuals: 4965
bin: 2.25e1
variant carriers: 390

GenotypeQuality
all individuals: 3686
bin: 3.75e1
variant carriers: 331

GenotypeQuality
all individuals: 1409
bin: 7.75e1
variant carriers: 90

GenotypeQuality
all individuals: 2914
bin: 4.25e1
variant carriers: 308

GenotypeQuality
all individuals: 3239
bin: 1.75e1
variant carriers: 316

GenotypeQuality
all individuals: 2248
bin: 6.25e1
variant carriers: 147

GenotypeQuality
all individuals: 4482
bin: 7.5e0
variant carriers: 473

GenotypeQuality
all individuals: 1120
bin: 8.25e1
variant carriers: 58

GenotypeQuality
all individuals: 845
bin: 9.25e1
variant carriers: 42

GenotypeQuality
all individuals: 4956
bin: 9.75e1
variant carriers: 218

GenotypeQuality
all individuals: 1834
bin: 6.75e1
variant carriers: 99

GenotypeQuality
all individuals: 2947
bin: 4.75e1
variant carriers: 231

East Asian
type: Population
allele count: 117
allele frequency: 2.144428152492668e-2
allele num: 5456
num of homozygotes: 0

African
type: Population
allele count: 368
allele frequency: 6.66908300108735e-2
allele num: 5518
num of homozygotes: 2

South Asian
type: Population
allele count: 354
allele frequency: 3.420950908388094e-2
allele num: 10348
num of homozygotes: 1

Latino
type: Population
allele count: 273
allele frequency: 3.649732620320856e-2
allele num: 7480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1245
allele frequency: 2.883412849136134e-2
allele num: 43178
num of homozygotes: 0

Other
type: Population
allele count: 16
allele frequency: 2.74914089347079e-2
allele num: 582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 127
allele frequency: 2.780210157618214e-2
allele num: 4568
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-1

QD
type: SiteQuality
SIO_000300: 3.05e0

MQ
type: SiteQuality
SIO_000300: 5.81e1

FS
type: SiteQuality
SIO_000300: 9.5e-1

DP
type: SiteQuality
SIO_000300: 1.540984e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

GenotypeQuality
all individuals: 4038
bin: 3.25e1
variant carriers: 15

GenotypeQuality
all individuals: 2914
bin: 4.25e1
variant carriers: 23

GenotypeQuality
all individuals: 4965
bin: 2.25e1
variant carriers: 29

GenotypeQuality
all individuals: 2492
bin: 5.25e1
variant carriers: 14

GenotypeQuality
all individuals: 3461
bin: 1.25e1
variant carriers: 30

GenotypeQuality
all individuals: 2947
bin: 4.75e1
variant carriers: 17

GenotypeQuality
all individuals: 3239
bin: 1.75e1
variant carriers: 19

GenotypeQuality
all individuals: 1120
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 7755
bin: 2.5e0
variant carriers: 58

GenotypeQuality
all individuals: 3626
bin: 2.75e1
variant carriers: 29

GenotypeQuality
all individuals: 4482
bin: 7.5e0
variant carriers: 29

GenotypeQuality
all individuals: 2053
bin: 5.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1409
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 4956
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 940
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1834
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 845
bin: 9.25e1
variant carriers: 3

East Asian
type: Population
allele count: 10
allele frequency: 1.832844574780059e-3
allele num: 5456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 8.756567425569177e-4
allele num: 4568
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 2.319288751449555e-3
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 3.20855614973262e-3
allele num: 7480
num of homozygotes: 0

African
type: Population
allele count: 46
allele frequency: 8.336353751359188e-3
allele num: 5518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 68
allele frequency: 1.574876094307286e-3
allele num: 43178
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.436426116838488e-3
allele num: 582
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.81e1

FS
type: SiteQuality
SIO_000300: 9.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 3.05e0

DP
type: SiteQuality
SIO_000300: 1.540984e6

East Asian
type: Population
allele count: 78
allele frequency: 1.429618768328446e-2
allele num: 5456
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 1.030927835051546e-2
allele num: 582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 334
allele frequency: 7.735420816156376e-3
allele num: 43178
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.05e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 9.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.81e1

DP
type: SiteQuality
SIO_000300: 1.540984e6

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-1

Other
type: Population
allele count: 8
allele frequency: 1.374570446735395e-2
allele num: 582
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

South Asian
type: Population
allele count: 29
allele frequency: 2.802473908001546e-3
allele num: 10348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.05e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
type: SiteQuality
SIO_000300: 1.540984e6

MQ
type: SiteQuality
SIO_000300: 5.81e1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

FS
type: SiteQuality
SIO_000300: 9.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8165
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 24
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1733
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 27
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 209
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 8.357915437561455e-3
allele num: 2034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.57e0

DP
type: SiteQuality
SIO_000300: 7.9267e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 2.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.397e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

VQSLOD
type: SiteQuality
SIO_000300: -2.687e0

GenotypeQuality
all individuals: 3183
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8165
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 27
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2034
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.780114722753346e-3
allele num: 1046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.687e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 2.573e0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

DP
type: SiteQuality
SIO_000300: 7.9267e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.397e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

QD
type: SiteQuality
SIO_000300: 3.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
all individuals: 8862
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1807
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1772
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1185
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3028
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1455
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4152
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.271481286241434e-4
allele num: 7588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1672
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: -1.774e0

QD
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 1.834e0

DP
type: SiteQuality
SIO_000300: 1.558834e6

MQ
type: SiteQuality
SIO_000300: 5.737e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.069999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

GenotypeQuality
all individuals: 702
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4848
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1605
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.107174490699734e-4
allele num: 9032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.427e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.656e0

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 5.26e0

DP
type: SiteQuality
SIO_000300: 2.311705e6

FS
type: SiteQuality
SIO_000300: 2.797e0

MQ
type: SiteQuality
SIO_000300: 5.559e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.18e-2

GenotypeQuality
all individuals: 1664
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 5216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7602
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3746
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4767
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8816
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.147037128104254e-5
allele num: 16268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.813863928112965e-5
allele num: 62320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.135e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.417875e6

MQ
type: SiteQuality
SIO_000300: 6.16e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.48e-1

QD
type: SiteQuality
SIO_000300: 7.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

MQRankSum
type: SiteQuality
SIO_000300: 4.69e0

GenotypeQuality
all individuals: 1350
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 125
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 2089
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9063
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5257
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1431
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 15266
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3917
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4834
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7677
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2601
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3803
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 5
allele frequency: 3.068237604320078e-4
allele num: 16296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 4.086122898004086e-4
allele num: 63630
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.202643171806167e-4
allele num: 9080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.242544731610338e-4
allele num: 8048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.054367745876604e-4
allele num: 6548
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.645036148827367e-4
allele num: 11342
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.451844e6

VQSLOD
type: SiteQuality
SIO_000300: -3.615e-1

FS
type: SiteQuality
SIO_000300: 1.941e0

QD
type: SiteQuality
SIO_000300: 2.38e0

MQ
type: SiteQuality
SIO_000300: 5.202e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

GenotypeQuality
all individuals: 7645
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4820
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 214
bin: 1.25e1
variant carriers: 15

GenotypeQuality
all individuals: 3793
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2087
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2582
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 5276
bin: 2.25e1
variant carriers: 14

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 23

GenotypeQuality
all individuals: 1572
bin: 7.5e0
variant carriers: 14

GenotypeQuality
all individuals: 1430
bin: 2.75e1
variant carriers: 11

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 585
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 15396
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 9031
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 5

South Asian
type: Population
allele count: 10
allele frequency: 6.144015728680265e-4
allele num: 16276
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.466401194624191e-4
allele num: 8036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.222120378857317e-3
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.649240551042035e-4
allele num: 11324
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.509034817100044e-4
allele num: 9076
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.587155963302753e-3
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 39
allele frequency: 6.134197363868004e-4
allele num: 63578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 3.498e1

DP
type: SiteQuality
SIO_000300: 2.446918e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.398e0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 3.607720521916902e-4
allele num: 33262
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.750087504375219e-4
allele num: 5714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 2.695e0

DP
type: SiteQuality
SIO_000300: 2.284589e6

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 5.618e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.398e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

QD
type: SiteQuality
SIO_000300: 5.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
all individuals: 2940
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21888
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 2134
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1378
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1694
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4108
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1638
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1764
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2545
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 1271
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1230
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2988
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1009
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1669
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1465
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 811
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 3.006433768264085e-4
allele num: 33262
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.122219955111202e-3
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.285412262156448e-4
allele num: 3784
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 2.80014000700035e-3
allele num: 5714
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 1.120717259045789e-3
allele num: 6246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.71253534401508e-4
allele num: 4244
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 5.618e1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 2.284589e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.398e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

FS
type: SiteQuality
SIO_000300: 2.695e0

QD
type: SiteQuality
SIO_000300: 5.49e0

GenotypeQuality
all individuals: 1271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1378
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2988
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21888
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2545
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 7.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 8.750437521876093e-4
allele num: 5714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.006433768264085e-5
allele num: 33262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.202049311559398e-4
allele num: 6246
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.398e-1

FS
type: SiteQuality
SIO_000300: 2.695e0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

MQ
type: SiteQuality
SIO_000300: 5.618e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 2.284589e6

GenotypeQuality
all individuals: 1378
bin: 4.25e1
variant carriers: 17

GenotypeQuality
all individuals: 2545
bin: 7.5e0
variant carriers: 25

GenotypeQuality
all individuals: 1764
bin: 1.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1113
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1694
bin: 1.75e1
variant carriers: 30

GenotypeQuality
all individuals: 1638
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2134
bin: 2.75e1
variant carriers: 17

GenotypeQuality
all individuals: 4108
bin: 2.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1271
bin: 8.25e1
variant carriers: 20

GenotypeQuality
all individuals: 2940
bin: 6.75e1
variant carriers: 21

GenotypeQuality
all individuals: 21888
bin: 2.5e0
variant carriers: 42

GenotypeQuality
all individuals: 2065
bin: 3.25e1
variant carriers: 23

GenotypeQuality
all individuals: 1009
bin: 5.75e1
variant carriers: 22

GenotypeQuality
all individuals: 5975
bin: 6.25e1
variant carriers: 20

GenotypeQuality
all individuals: 2988
bin: 9.75e1
variant carriers: 299

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 811
bin: 9.25e1
variant carriers: 9

Latino
type: Population
allele count: 35
allele frequency: 5.603586295228946e-3
allele num: 6246
num of homozygotes: 1

East Asian
type: Population
allele count: 15
allele frequency: 3.53440150801131e-3
allele num: 4244
num of homozygotes: 0

African
type: Population
allele count: 289
allele frequency: 5.057752887644382e-2
allele num: 5714
num of homozygotes: 9

Other
type: Population
allele count: 3
allele frequency: 6.25e-3
allele num: 480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 106
allele frequency: 3.18681979435993e-3
allele num: 33262
num of homozygotes: 0

South Asian
type: Population
allele count: 29
allele frequency: 2.958579881656805e-3
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.321353065539112e-3
allele num: 3784
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 2.695e0

QD
type: SiteQuality
SIO_000300: 5.49e0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.618e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.398e-1

DP
type: SiteQuality
SIO_000300: 2.284589e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

GenotypeQuality
all individuals: 2545
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21888
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1465
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4108
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2940
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3784
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.250262513125656e-4
allele num: 5714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.006433768264085e-5
allele num: 33262
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.398e-1

MQ
type: SiteQuality
SIO_000300: 5.618e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

QD
type: SiteQuality
SIO_000300: 5.49e0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 2.284589e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

FS
type: SiteQuality
SIO_000300: 2.695e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

GenotypeQuality
all individuals: 1220
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1145
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1992
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 6019
bin: 2.5e0
variant carriers: 19

GenotypeQuality
all individuals: 2551
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2272
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2266
bin: 7.5e0
variant carriers: 22

GenotypeQuality
all individuals: 2716
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1185
bin: 1.25e1
variant carriers: 18

GenotypeQuality
all individuals: 5742
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 955
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1267
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1132
bin: 1.75e1
variant carriers: 17

GenotypeQuality
all individuals: 5525
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 13571
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 995
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1881
bin: 3.75e1
variant carriers: 13

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.361204013377926e-4
allele num: 5980
num of homozygotes: 0

African
type: Population
allele count: 73
allele frequency: 1.205416116248349e-2
allele num: 6056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 68
allele frequency: 1.290224650880389e-3
allele num: 52704
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.333333333333333e-3
allele num: 750
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.477541371158392e-4
allele num: 6768
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.566088953852579e-3
allele num: 9578
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.909090909090909e-4
allele num: 13750
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

FS
type: SiteQuality
SIO_000300: 6.905e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.52e-2

MQ
type: SiteQuality
SIO_000300: 5.645e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 1.875134e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -1.422e0

QD
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
all individuals: 7316
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
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variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2412
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4433
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7454
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.326e0

MQRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.483e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.733754e6

QD
type: SiteQuality
SIO_000300: 5.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.149e0

GenotypeQuality
all individuals: 452
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1920
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6424
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variant carriers: 0

GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
all individuals: 1709
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variant carriers: 0

GenotypeQuality
all individuals: 2272
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variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
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variant carriers: 1

GenotypeQuality
all individuals: 2520
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 18224
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2615
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60410
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 9.548818333731201e-4
allele num: 8378
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.996041741633681e-5
allele num: 11116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 5.658e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

QD
type: SiteQuality
SIO_000300: 1.554e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.94e-1

FS
type: SiteQuality
SIO_000300: 8.964e0

DP
type: SiteQuality
SIO_000300: 1.69936e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 1189
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2418
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 966
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6329
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 547
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variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3393
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4524
bin: 9.75e1
variant carriers: 95

GenotypeQuality
all individuals: 2425
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3279
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5728
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 93
allele frequency: 1.149851632047478e-2
allele num: 8088
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.816860465116279e-4
allele num: 11008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15678
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.422e1

DP
type: SiteQuality
SIO_000300: 1.574119e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.513e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQ
type: SiteQuality
SIO_000300: 5.893e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.021e-1

QD
type: SiteQuality
SIO_000300: 1.598e1

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 4.446284e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.248e0

FS
type: SiteQuality
SIO_000300: 8.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
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variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 275
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 979
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4395
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variant carriers: 0

GenotypeQuality
all individuals: 48735
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.644681839294008e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

QD
type: SiteQuality
SIO_000300: 1.818e1

DP
type: SiteQuality
SIO_000300: 4.45082e6

FS
type: SiteQuality
SIO_000300: 9.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.880000000000001e0

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
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GenotypeQuality
all individuals: 4543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 5.25e1
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GenotypeQuality
all individuals: 1190
bin: 7.75e1
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
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GenotypeQuality
all individuals: 989
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503307276007216e-5
allele num: 66520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.451857e6

FS
type: SiteQuality
SIO_000300: 2.129e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.0e-2

MQ
type: SiteQuality
SIO_000300: 5.991e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.81e-1

QD
type: SiteQuality
SIO_000300: 1.641e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

GenotypeQuality
all individuals: 1859
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 181
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GenotypeQuality
all individuals: 95
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GenotypeQuality
all individuals: 866
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 1188
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 486
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GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 6.25e1
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GenotypeQuality
all individuals: 48735
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.324511330219685e-4
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2722e1

DP
type: SiteQuality
SIO_000300: 4.454365e6

MQRankSum
type: SiteQuality
SIO_000300: -1.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.371e0

MQ
type: SiteQuality
SIO_000300: 5.163e1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-1

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48734
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.343e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.029999999999999e0

FS
type: SiteQuality
SIO_000300: 6.877e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: -3.536e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.133e0

DP
type: SiteQuality
SIO_000300: 4.456509e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e0

GenotypeQuality
all individuals: 757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5047
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variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48735
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
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variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.16e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

DP
type: SiteQuality
SIO_000300: 4.457455e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48740
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1928
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.854368932038835e-4
allele num: 16480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.957e0

VQSLOD
type: SiteQuality
SIO_000300: 6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.778e0

QD
type: SiteQuality
SIO_000300: 1.282e1

DP
type: SiteQuality
SIO_000300: 4.459672e6

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.83e-1

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001380635092142e-5
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 2.127e0

QD
type: SiteQuality
SIO_000300: 1.259e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.393e0

DP
type: SiteQuality
SIO_000300: 4.462956e6

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
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variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48735
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.259e1

FS
type: SiteQuality
SIO_000300: 2.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.393e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 4.462956e6

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

GenotypeDepth
all individuals: 2239
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3945
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48734
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5542
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 4.463313e6

FS
type: SiteQuality
SIO_000300: 1.877e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.364e1

VQSLOD
type: SiteQuality
SIO_000300: 8.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.022e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 3297
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3945
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13937
bin: 9.75e1
variant carriers: 1

GenotypeDepth
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48734
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
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SIO_000300: 1.372e1

VQSLOD
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SIO_000300: 5.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 4.463881e6

FS
type: SiteQuality
SIO_000300: 3.796e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.409999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.378e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 7.435e0

ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

BaseQRankSum
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SIO_000300: -1.934e0

FS
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SIO_000300: 3.819e0

VQSLOD
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SIO_000300: -1.426e-1

ClippingRankSum
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SIO_000300: -1.349e0

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.804e1

DP
type: SiteQuality
SIO_000300: 4.464154e6

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

African
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Other
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South Asian
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East Asian
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allele num: 8644
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Latino
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.199e0

VQSLOD
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.334e1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-2

ReadPosRankSum
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SIO_000300: 1.09e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66710
num of homozygotes: 0

Other
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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FS
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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VQSLOD
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SIO_000300: 2.41e-1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

MQ
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ClippingRankSum
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66720
num of homozygotes: 0

Other
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European (Finnish)
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African
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Latino
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South Asian
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East Asian
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VQSLOD
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DP
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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QD
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 80

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 77
allele frequency: 7.402422611036339e-3
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.324e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 5.19e-1

BaseQRankSum
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SIO_000300: -9.22e-1

VQSLOD
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SIO_000300: 4.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

DP
type: SiteQuality
SIO_000300: 4.47761e6

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 48721
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

VQSLOD
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SIO_000300: 1.13e0

QD
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SIO_000300: 1.135e1

MQRankSum
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SIO_000300: 3.85e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 8.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.459899e6

BaseQRankSum
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SIO_000300: -2.046e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5650
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GenotypeQuality
all individuals: 1976
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994125756758376e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.460562e6

BaseQRankSum
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SIO_000300: -4.065e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

VQSLOD
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SIO_000300: 4.18e-1

ClippingRankSum
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SIO_000300: 8.0e-3

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e-1

MQ
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SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 784
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1976
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

FS
type: SiteQuality
SIO_000300: 5.41e-1

BaseQRankSum
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SIO_000300: -4.9e-2

MQRankSum
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SIO_000300: 2.89e-1

VQSLOD
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DP
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SIO_000300: 4.459794e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
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SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.159e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1975
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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DP
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.011e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66728
num of homozygotes: 0

MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQRankSum
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BaseQRankSum
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SIO_000300: -1.867e0

DP
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InbreedingCoeff
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SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

QD
type: SiteQuality
SIO_000300: 1.524e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
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MQRankSum
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SIO_000300: 5.39e-1

BaseQRankSum
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SIO_000300: -8.196999999999999e0

FS
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SIO_000300: 0.0e0

DP
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QD
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InbreedingCoeff
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SIO_000300: -3.0e-4

MQ
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SIO_000300: 5.979e1

VQSLOD
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ReadPosRankSum
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SIO_000300: -1.215e0

ClippingRankSum
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SIO_000300: 1.88e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.1e-2

FS
type: SiteQuality
SIO_000300: 6.172e0

VQSLOD
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ClippingRankSum
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SIO_000300: -8.1e-2

BaseQRankSum
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QD
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SIO_000300: 1.611e1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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SIO_000300: 1.78e0

MQ
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SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.456302e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

FS
type: SiteQuality
SIO_000300: 6.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

BaseQRankSum
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SIO_000300: -6.088e0

QD
type: SiteQuality
SIO_000300: 1.483e1

ReadPosRankSum
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SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 4.45626e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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ReadPosRankSum
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SIO_000300: -1.6e-1

ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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MQRankSum
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.161170459823502e-4
allele num: 8612
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African
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European (Non-Finnish)
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South Asian
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Latino
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Other
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European (Finnish)
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VQSLOD
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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Other
type: Population
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
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South Asian
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.338e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.450554e6

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00390507659958e-5
allele num: 66580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.492e0

QD
type: SiteQuality
SIO_000300: 1.468e1

DP
type: SiteQuality
SIO_000300: 4.450459e6

MQRankSum
type: SiteQuality
SIO_000300: -3.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.492e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 4.450459e6

MQRankSum
type: SiteQuality
SIO_000300: -3.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.468e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 981
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e0

QD
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.48e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.346e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.952e0

VQSLOD
type: SiteQuality
SIO_000300: -6.069e0

DP
type: SiteQuality
SIO_000300: 4.448233e6

FS
type: SiteQuality
SIO_000300: 8.948e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

GenotypeQuality
all individuals: 48714
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.442674e6

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

QD
type: SiteQuality
SIO_000300: 1.469e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
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allele count: 7
allele frequency: 6.064806792583608e-4
allele num: 11542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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DP
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MQRankSum
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.765625000000001e-5
allele num: 10240
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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SIO_000300: 4.438034e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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SIO_000300: 4.2e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 375
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 113
allele frequency: 1.106758080313418e-2
allele num: 10210
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.669e1

DP
type: SiteQuality
SIO_000300: 4.433777e6

VQSLOD
type: SiteQuality
SIO_000300: 5.99e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48709
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.431259e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.122e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 55
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GenotypeQuality
all individuals: 48708
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00960062599693e-5
allele num: 66454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
SIO_000300: 1.117e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 4.42979e6

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

GenotypeQuality
all individuals: 126
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48707
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819946614899296e-4
allele num: 16484
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.784e0

QD
type: SiteQuality
SIO_000300: 1.429e1

DP
type: SiteQuality
SIO_000300: 4.42495e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

GenotypeQuality
all individuals: 439
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48706
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e-1

DP
type: SiteQuality
SIO_000300: 4.424979e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.693e0

QD
type: SiteQuality
SIO_000300: 1.16e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.88e-1

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31751
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4832
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.939e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

DP
type: SiteQuality
SIO_000300: 1.829273e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

VQSLOD
type: SiteQuality
SIO_000300: 6.919999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

QD
type: SiteQuality
SIO_000300: 1.313e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9948
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3101
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4833
bin: 9.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202754307363863e-4
allele num: 66514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 1.840543e6

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.447e0

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

QD
type: SiteQuality
SIO_000300: 1.369e1