19-35608306-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35608306
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35608306
    reference: chr 19
allele count: 5
allele frequency: 3.4592500345925e-4
allele num: 14454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-99+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-99+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.73+24C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.73+24C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-15+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.42+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-99+1043C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-99+1043C>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

19-35608314-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35608314
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35608314
    reference: chr 19
allele count: 8
allele frequency: 6.003301815998799e-4
allele num: 13326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-99+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.42+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-99+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.73+32A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.73+32A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-99+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-15+1051A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-99+1051A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-35608318-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35608318
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35608318
    reference: chr 19
allele count: 1
allele frequency: 7.714858818083629e-5
allele num: 12962
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.73+36C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-99+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-99+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.42+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-99+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.73+36C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-15+1055C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-99+1055C>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

19-35610037-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610037
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610037
    reference: chr 19
allele count: 278
allele frequency: 1.361277054157281e-2
allele num: 20422
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-35T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-35T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-35T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-35T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-35T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-35T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-230T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-35T>C
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 7.5e0
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 3.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
num of homozygotes: 7
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

19-35610038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610038
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610038
    reference: chr 19
allele count: 1
allele frequency: 4.900519455062237e-5
allele num: 20406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-34G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-229G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/19-35610040-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610040
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610040
    reference: chr 19
allele count: 1
allele frequency: 4.898119122257053e-5
allele num: 20416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-32C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-32C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-32C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-32C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-32C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-32C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-227C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-32C>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

19-35610041-CAGTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610041
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610037
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 20468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-222_43-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-27_74-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-27_-98-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-27_-98-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-27_-98-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-27_-98-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-27_74-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-222_-14-219delGAGT
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-27_-98-24delGAGT
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: CAGTG
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS

19-35610050-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610050
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610050
    reference: chr 19
allele count: 1
allele frequency: 4.872819413312543e-5
allele num: 20522
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-217A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-22A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP

19-35610050-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610050
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610050
    reference: chr 19
allele count: 5
allele frequency: 2.436409706656271e-4
allele num: 20522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-22A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-22A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-22A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-22A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-22A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-217A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-22A>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-22A>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-35610054-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610054
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610054
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 20466
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-18T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-213T>C
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31445
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

19-35610061-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610061
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610061
    reference: chr 19
allele count: 317
allele frequency: 1.607668120499036e-2
allele num: 19718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-11T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-11T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-11T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-11T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-11T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-11T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-206T>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-11T>C
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 3.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

19-35610064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610064
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610064
    reference: chr 19
allele count: 1
allele frequency: 4.843553230650005e-5
allele num: 20646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-8C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-203C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.74-8C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-35610065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610065
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610065
    reference: chr 19
allele count: 1
allele frequency: 4.868549172346641e-5
allele num: 20540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-202G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-7G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-202G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.74-7G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

19-35610065-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610065
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610065
    reference: chr 19
allele count: 28
allele frequency: 1.363193768257059e-3
allele num: 20540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-98-7G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-98-7G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-98-7G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-98-7G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.74-7G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-98-7G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-202G>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.74-7G>C
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 33452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.74-7G>C
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

19-35610075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610075
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610075
    reference: chr 19
allele count: 3
allele frequency: 1.413893863700632e-4
allele num: 21218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-95C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-95C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-95C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.77C>T
  hgvsp: ENSP00000473929.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-95C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-95C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.77C>T
  hgvsp: ENSP00000443953.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-192C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-192C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro26Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-35610081-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610081
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610081
    reference: chr 19
allele count: 1
allele frequency: 4.602356406480118e-5
allele num: 21728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.83T>A
  hgvsp: ENSP00000443953.1:p.Phe28Tyr
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-89T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-89T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.83T>A
  hgvsp: ENSP00000473929.1:p.Phe28Tyr
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-89T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-89T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-89T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-186T>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe28Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-35610090-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610090
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610090
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 22946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-80C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-80C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.92C>A
  hgvsp: ENSP00000443953.1:p.Ser31Tyr
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-80C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.92C>A
  hgvsp: ENSP00000473929.1:p.Ser31Tyr
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-80C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-80C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-177C>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser31Tyr
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-35610100-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610100
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610100
    reference: chr 19
allele count: 16
allele frequency: 6.294256490952006e-4
allele num: 25420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-70C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.102C>T
  hgvsp: ENST00000535103.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-70C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.102C>T
  hgvsp: ENST00000604255.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-167C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20097
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His34His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

19-35610101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610101
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610101
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 25906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-69G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.103G>A
  hgvsp: ENSP00000473929.1:p.Gly35Ser
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-69G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.103G>A
  hgvsp: ENSP00000443953.1:p.Gly35Ser
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-69G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-69G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-69G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-166G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26838
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly35Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-35610102-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610102
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610102
    reference: chr 19
allele count: 1
allele frequency: 3.796218965909954e-5
allele num: 26342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-68G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-68G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.104G>A
  hgvsp: ENSP00000443953.1:p.Gly35Asp
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-68G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-68G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.104G>A
  hgvsp: ENSP00000473929.1:p.Gly35Asp
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-68G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-165G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly35Asp
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

19-35610104-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610104
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610104
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 27432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-66G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-66G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-66G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.106G>A
  hgvsp: ENSP00000443953.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.106G>A
  hgvsp: ENSP00000473929.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-66G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-66G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-163G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-163G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28271
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala36Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-35610107-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610107
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610107
    reference: chr 19
allele count: 1
allele frequency: 3.478744868851319e-5
allele num: 28746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-63G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.109G>T
  hgvsp: ENSP00000473929.1:p.Ala37Ser
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.109G>T
  hgvsp: ENSP00000443953.1:p.Ala37Ser
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-63G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-63G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-63G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-63G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-160G>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14903
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala37Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

19-35610112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610112
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610112
    reference: chr 19
allele count: 1
allele frequency: 3.132243312660528e-5
allele num: 31926
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.114G>A
  hgvsp: ENST00000604255.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-58G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-58G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-58G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-58G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.114G>A
  hgvsp: ENST00000535103.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-58G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-155G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala38Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-35610117-ATC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610117
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610115
    reference: chr 19
allele count: 1
allele frequency: 2.800649750742172e-5
allele num: 35706
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.124_125delTC
  hgvsp: ENSP00000473929.1:p.Ala43ProfsTer14
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-48_-47delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-48_-47delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.124_125delTC
  hgvsp: ENSP00000443953.1:p.Ala43ProfsTer14
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-48_-47delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-145_43-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-48_-47delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-48_-47delTC
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-145_-14-144delTC
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala43ProfsTer14
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: ATC
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-35610124-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610124
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610124
    reference: chr 19
allele count: 1
allele frequency: 2.395209580838323e-5
allele num: 41750
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.126A>G
  hgvsp: ENST00000604255.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.126A>G
  hgvsp: ENST00000535103.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-46A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-46A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-143A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser42Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

19-35610128-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610128
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610128
    reference: chr 19
allele count: 1
allele frequency: 2.098459730557771e-5
allele num: 47654
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.130C>G
  hgvsp: ENSP00000473929.1:p.Gln44Glu
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-42C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-42C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-42C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-42C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-42C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.130C>G
  hgvsp: ENSP00000443953.1:p.Gln44Glu
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-139C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-139C>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31928
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln44Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-35610129-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610129
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610129
    reference: chr 19
allele count: 3
allele frequency: 6.038647342995169e-5
allele num: 49680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-41A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.131A>C
  hgvsp: ENSP00000473929.1:p.Gln44Pro
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.131A>C
  hgvsp: ENSP00000443953.1:p.Gln44Pro
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-41A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-138A>C
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9657
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln44Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-35610131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610131
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610131
    reference: chr 19
allele count: 18
allele frequency: 3.475171827940381e-4
allele num: 51796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.133C>T
  hgvsp: ENSP00000443953.1:p.Arg45Ter
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.133C>T
  hgvsp: ENSP00000473929.1:p.Arg45Ter
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-136C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-39C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-39C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg45Ter
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-35610132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610132
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610132
    reference: chr 19
allele count: 2
allele frequency: 3.627788862688192e-5
allele num: 55130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-38G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.134G>A
  hgvsp: ENSP00000443953.1:p.Arg45Gln
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.134G>A
  hgvsp: ENSP00000473929.1:p.Arg45Gln
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-135G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg45Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-35610151-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610151
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610151
    reference: chr 19
allele count: 1
allele frequency: 1.161305307165254e-5
allele num: 86110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-19C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-19C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-19C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.153C>A
  hgvsp: ENST00000535103.1:c.153C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-19C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.153C>A
  hgvsp: ENST00000604255.1:c.153C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-19C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-116C>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val51Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/19-35610153-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610153
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610153
    reference: chr 19
allele count: 1
allele frequency: 1.111555733404473e-5
allele num: 89964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-17C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-17C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.155C>A
  hgvsp: ENSP00000443953.1:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-17C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.155C>A
  hgvsp: ENSP00000473929.1:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-17C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-114C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-17C>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27984
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro52Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

19-35610153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610153
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610153
    reference: chr 19
allele count: 1
allele frequency: 1.111555733404473e-5
allele num: 89964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-17C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-17C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-17C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-17C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.155C>T
  hgvsp: ENSP00000473929.1:p.Pro52Leu
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.155C>T
  hgvsp: ENSP00000443953.1:p.Pro52Leu
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-17C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-114C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro52Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

19-35610154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610154
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610154
    reference: chr 19
allele count: 2
allele frequency: 2.159780566294465e-5
allele num: 92602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.156G>A
  hgvsp: ENST00000535103.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.156G>A
  hgvsp: ENST00000604255.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-16G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-16G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-113G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-113G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.156G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

19-35610163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610163
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610163
    reference: chr 19
allele count: 1
allele frequency: 9.608547764090935e-6
allele num: 104074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-104G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+8G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.157+8G>A
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

19-35610164-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610164
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610164
    reference: chr 19
allele count: 2
allele frequency: 1.903420446542437e-5
allele num: 105074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-103C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-35610165-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610165
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610165
    reference: chr 19
allele count: 1
allele frequency: 9.382799452044513e-6
allele num: 106578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+10G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+10G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+10G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+10G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+10G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-102G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+10G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+10G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

19-35610173-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610173
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610173
    reference: chr 19
allele count: 235
allele frequency: 2.078101234480563e-3
allele num: 113084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+18C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+18C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+18C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+18C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+18C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-94C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+18C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+18C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-35610176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610176
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610176
    reference: chr 19
allele count: 2
allele frequency: 1.742706772158517e-5
allele num: 114764
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+21G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-91G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

19-35610182-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610182
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610182
    reference: chr 19
allele count: 6
allele frequency: 5.132767588283603e-5
allele num: 116896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+27C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-85C>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-35610182-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610182
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610181
    reference: chr 19
allele count: 1
allele frequency: 8.554612647139337e-6
allele num: 116896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+28delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-84delA
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: CA
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-35610184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610184
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610184
    reference: chr 19
allele count: 1
allele frequency: 8.489829184636805e-6
allele num: 117788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+29G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-83G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+29G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

19-35610185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610185
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610185
    reference: chr 19
allele count: 3
allele frequency: 2.541554414680018e-5
allele num: 118038
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+30G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+30G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+30G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+30G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+30G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-82G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+30G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+30G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37398
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

19-35610186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610186
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610186
    reference: chr 19
allele count: 1
allele frequency: 8.453514125822104e-6
allele num: 118294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+31G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-81G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37418
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-35610188-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610188
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610188
    reference: chr 19
allele count: 1
allele frequency: 8.421052631578947e-6
allele num: 118750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-15+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.157+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-15+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.157+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-15+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-15+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-15+33A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-79A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

19-35610218-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610218
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610218
    reference: chr 19
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-35610219-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610219
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610219
    reference: chr 19
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-48A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-48A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-35610226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610226
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610226
    reference: chr 19
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-41C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-35610227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610227
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610227
    reference: chr 19
allele count: 72
allele frequency: 5.937556695419834e-4
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-40G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-35610227-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610227
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610227
    reference: chr 19
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-40G>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

19-35610234-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610234
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610234
    reference: chr 19
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-33C>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

19-35610245-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610245
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610245
    reference: chr 19
allele count: 86729
allele frequency: 7.148662237681541e-1
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-22A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 4.75e1
  variant carriers: 1606
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 6.25e1
  variant carriers: 2474
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 8.75e1
  variant carriers: 3192
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 5.25e1
  variant carriers: 1922
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.25e1
  variant carriers: 667
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.25e1
  variant carriers: 242
genotype quality: GenotypeQuality
num of homozygotes: 31348
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-35610245-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610245
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610245
    reference: chr 19
allele count: 22
allele frequency: 1.813356192611398e-4
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-22A>C
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

19-35610247-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610247
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610247
    reference: chr 19
allele count: 5
allele frequency: 4.119905736556747e-5
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-20A>G
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum

19-35610253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610253
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610253
    reference: chr 19
allele count: 6
allele frequency: 4.943561011782154e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-14C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

19-35610254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610254
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610254
    reference: chr 19
allele count: 15
allele frequency: 1.235890252945538e-4
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-13G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-13G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

19-35610256-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610256
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610256
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-11C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8072
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/19-35610258-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610258
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610258
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-9C>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-35610261-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610261
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610261
    reference: chr 19
allele count: 4
allele frequency: 3.295435821387378e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-6C>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-6C>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.158-6C>A
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

19-35610263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610263
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610263
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14-4C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.158-4C>T
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

19-35610267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610267
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610267
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.43G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.158G>A
  hgvsp: ENSP00000473929.1:p.Gly53Asp
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.158G>A
  hgvsp: ENSP00000443953.1:p.Gly53Asp
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474622
  ensembl transcript: ENST00000605677
  gene symbol: FXYD3
  hgvsc: ENST00000605677.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly53Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

19-35610268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610268
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610268
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474622
  ensembl transcript: ENST00000605677
  gene symbol: FXYD3
  hgvsc: ENST00000605677.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.159C>T
  hgvsp: ENST00000604255.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-13C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.159C>T
  hgvsp: ENST00000535103.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.44C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.159C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-35610272-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610272
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610272
    reference: chr 19
allele count: 5
allele frequency: 4.119159032491926e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.163C>T
  hgvsp: ENSP00000473929.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474622
  ensembl transcript: ENST00000605677
  gene symbol: FXYD3
  hgvsc: ENST00000605677.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.163C>T
  hgvsp: ENSP00000443953.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-9C>T
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.48C>T
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg55Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

19-35610273-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35610273
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 35610273
    reference: chr 19
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474223
  ensembl transcript: ENST00000603524
  gene symbol: FXYD3
  hgvsc: ENST00000603524.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385200
  ensembl transcript: ENST00000406988
  gene symbol: FXYD3
  hgvsc: ENST00000406988.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474855
  ensembl transcript: ENST00000605552
  gene symbol: FXYD3
  hgvsc: ENST00000605552.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474514
  ensembl transcript: ENST00000605550
  gene symbol: FXYD3
  hgvsc: ENST00000605550.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000328259
  ensembl transcript: ENST00000346446
  gene symbol: FXYD3
  hgvsc: ENST00000346446.5:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474055
  ensembl transcript: ENST00000603449
  gene symbol: FXYD3
  hgvsc: ENST00000603449.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000443953
  ensembl transcript: ENST00000535103
  gene symbol: FXYD3
  hgvsc: ENST00000535103.1:c.164G>A
  hgvsp: ENSP00000443953.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000339499
  ensembl transcript: ENST00000344013
  gene symbol: FXYD3
  hgvsc: ENST00000344013.6:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000473929
  ensembl transcript: ENST00000604255
  gene symbol: FXYD3
  hgvsc: ENST00000604255.1:c.164G>A
  hgvsp: ENSP00000473929.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474851
  ensembl transcript: ENST00000603181
  gene symbol: FXYD3
  hgvsc: ENST00000603181.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089356
  ensembl transcript: ENST00000604504
  gene symbol: FXYD3
  hgvsc: ENST00000604504.1:n.49G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474622
  ensembl transcript: ENST00000605677
  gene symbol: FXYD3
  hgvsc: ENST00000605677.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000389770
  ensembl transcript: ENST00000435734
  gene symbol: FXYD3
  hgvsc: ENST00000435734.2:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474438
  ensembl transcript: ENST00000604404
  gene symbol: FXYD3
  hgvsc: ENST00000604404.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000415449
  ensembl transcript: ENST00000454903
  gene symbol: FXYD3
  hgvsc: ENST00000454903.2:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000475056
  ensembl transcript: ENST00000604804
  gene symbol: FXYD3
  hgvsc: ENST00000604804.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000385412
  ensembl transcript: ENST00000406242
  gene symbol: FXYD3
  hgvsc: ENST00000406242.3:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089356
  ensembl protein: ENSP00000474526
  ensembl transcript: ENST00000604621
  gene symbol: FXYD3
  hgvsc: ENST00000604621.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/4027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg55His
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 669
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2054
bin: 7.5e0
variant carriers: 3

GenotypeDepth
all individuals: 438
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 107
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1177
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7184
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 1.23334977799704e-3
allele num: 4054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.244e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

QD
type: SiteQuality
SIO_000300: 1.133e1

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.67385e5

VQSLOD
type: SiteQuality
SIO_000300: 9.409999999999999e-1

GenotypeDepth
all individuals: 107
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 357
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 782
bin: 2.75e1
variant carriers: 3

GenotypeDepth
all individuals: 157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1885
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 186
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3220
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 3.887269193391642e-3
allele num: 2058
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 2.59417e5

FS
type: SiteQuality
SIO_000300: 3.252e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.013e0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

QD
type: SiteQuality
SIO_000300: 1.462e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 123
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2560
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 742
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 396
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.462415911085113e-4
allele num: 6838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.264e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.47e-2

DP
type: SiteQuality
SIO_000300: 2.56902e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.812e0

MQRankSum
type: SiteQuality
SIO_000300: -1.156e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 289
bin: 6.25e1
variant carriers: 12

GenotypeDepth
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 7.25e1
variant carriers: 7

GenotypeDepth
all individuals: 82
bin: 8.25e1
variant carriers: 4

GenotypeDepth
all individuals: 423
bin: 1.25e1
variant carriers: 22

GenotypeDepth
all individuals: 28910
bin: 2.5e0
variant carriers: 68

GenotypeDepth
all individuals: 985
bin: 4.25e1
variant carriers: 24

GenotypeDepth
all individuals: 1612
bin: 3.25e1
variant carriers: 26

GenotypeDepth
all individuals: 211
bin: 6.75e1
variant carriers: 10

GenotypeDepth
all individuals: 120
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 54
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 548
bin: 5.25e1
variant carriers: 26

GenotypeQuality
all individuals: 775
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 22260
bin: 7.5e0
variant carriers: 27

GenotypeQuality
all individuals: 6189
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 375
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 2.25e1
variant carriers: 20

GenotypeQuality
all individuals: 3793
bin: 9.75e1
variant carriers: 270

GenotypeQuality
all individuals: 584
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 19

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 18

GenotypeQuality
all individuals: 917
bin: 1.25e1
variant carriers: 10

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 11

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1654
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1056
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 13

GenotypeQuality
all individuals: 722
bin: 8.25e1
variant carriers: 7

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 186
allele frequency: 2.10074542579625e-2
allele num: 8854
num of homozygotes: 5

Latino
type: Population
allele count: 7
allele frequency: 1.569506726457399e-2
allele num: 446
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 1.020408163265306e-2
allele num: 196
num of homozygotes: 0

South Asian
type: Population
allele count: 69
allele frequency: 8.701134930643128e-3
allele num: 7930
num of homozygotes: 1

African
type: Population
allele count: 14
allele frequency: 6.183745583038869e-3
allele num: 2264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.68034e5

QD
type: SiteQuality
SIO_000300: 1.4e1

VQSLOD
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.59e-2

FS
type: SiteQuality
SIO_000300: 1.493e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeDepth
all individuals: 548
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 776
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2033
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 995
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 164
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variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 413
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 289
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variant carriers: 0

GenotypeDepth
all individuals: 54
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variant carriers: 0

GenotypeDepth
all individuals: 208
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variant carriers: 0

GenotypeDepth
all individuals: 38
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variant carriers: 0

GenotypeDepth
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
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variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5857
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23053
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.261034047919294e-4
allele num: 7930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.729999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

QD
type: SiteQuality
SIO_000300: 1.128e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.6833e5

MQ
type: SiteQuality
SIO_000300: 5.604e1

GenotypeDepth
all individuals: 548
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1236
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29792
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variant carriers: 0

GenotypeDepth
all individuals: 2175
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variant carriers: 0

GenotypeDepth
all individuals: 1625
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
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variant carriers: 0

GenotypeDepth
all individuals: 208
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variant carriers: 0

GenotypeDepth
all individuals: 117
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variant carriers: 1

GenotypeDepth
all individuals: 777
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variant carriers: 0

GenotypeDepth
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
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variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
all individuals: 917
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variant carriers: 0

GenotypeQuality
all individuals: 599
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variant carriers: 0

GenotypeQuality
all individuals: 5241
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24126
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GenotypeQuality
all individuals: 732
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variant carriers: 0

GenotypeQuality
all individuals: 786
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1066
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.41306266548985e-4
allele num: 2266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.88e0

VQSLOD
type: SiteQuality
SIO_000300: -2.441e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.229e0

FS
type: SiteQuality
SIO_000300: 8.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.67e-2

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
SIO_000300: 8.51e0

DP
type: SiteQuality
SIO_000300: 4.71269e5

GenotypeDepth
all individuals: 29995
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 289
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1629
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 79
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variant carriers: 0

GenotypeDepth
all individuals: 548
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variant carriers: 0

GenotypeDepth
all individuals: 163
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variant carriers: 0

GenotypeDepth
all individuals: 114
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variant carriers: 0

GenotypeDepth
all individuals: 1241
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1413
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 116
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variant carriers: 0

GenotypeDepth
all individuals: 54
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variant carriers: 0

GenotypeDepth
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24697
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GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
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variant carriers: 0

GenotypeQuality
all individuals: 1525
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4906
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
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variant carriers: 0

GenotypeQuality
all individuals: 3652
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

MQ
type: SiteQuality
SIO_000300: 5.58e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.62e-2

QD
type: SiteQuality
SIO_000300: 1.374e1

DP
type: SiteQuality
SIO_000300: 4.72825e5

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 113
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 777
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1304
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
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variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1651
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variant carriers: 0

GenotypeDepth
all individuals: 1651
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 550
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variant carriers: 0

GenotypeDepth
all individuals: 78
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variant carriers: 0

GenotypeDepth
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
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variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
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GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 333
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27818
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.122082585278277e-4
allele num: 8912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.79e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.231e-1

MQ
type: SiteQuality
SIO_000300: 5.869e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

FS
type: SiteQuality
SIO_000300: 4.413e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

DP
type: SiteQuality
SIO_000300: 4.84177e5

GenotypeDepth
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
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variant carriers: 1

GenotypeDepth
all individuals: 164
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variant carriers: 0

GenotypeDepth
all individuals: 116
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variant carriers: 0

GenotypeDepth
all individuals: 550
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GenotypeDepth
all individuals: 2966
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GenotypeDepth
all individuals: 38
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GenotypeDepth
all individuals: 207
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variant carriers: 0

GenotypeDepth
all individuals: 998
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variant carriers: 0

GenotypeDepth
all individuals: 289
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GenotypeDepth
all individuals: 78
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variant carriers: 0

GenotypeDepth
all individuals: 1304
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
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variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27818
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
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variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
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variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 2.194907813871817e-3
allele num: 2278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.413e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

BaseQRankSum
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SIO_000300: 2.04e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

DP
type: SiteQuality
SIO_000300: 4.84177e5

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
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SIO_000300: -4.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.231e-1

InbreedingCoeff
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SIO_000300: 5.79e-2

QD
type: SiteQuality
SIO_000300: 1.225e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8872
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.01e-1

DP
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SIO_000300: 4.88269e5

InbreedingCoeff
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SIO_000300: -7.489999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.292e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 9

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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variant carriers: 147

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 14

Other
type: Population
allele count: 1
allele frequency: 5.10204081632653e-3
allele num: 196
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 6.912442396313364e-3
allele num: 434
num of homozygotes: 0

African
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allele count: 94
allele frequency: 4.653465346534653e-2
allele num: 2020
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7984
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

East Asian
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allele count: 5
allele frequency: 7.462686567164179e-3
allele num: 670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 214
allele frequency: 2.555529018390255e-2
allele num: 8374
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.415e0

FS
type: SiteQuality
SIO_000300: 1.22991e2

DP
type: SiteQuality
SIO_000300: 4.96008e5

ClippingRankSum
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SIO_000300: 2.65e0

InbreedingCoeff
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SIO_000300: -8.459999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.023999999999999e1

MQ
type: SiteQuality
SIO_000300: 5.594e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.075e0

GenotypeDepth
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bin: 9.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.370629370629371e-4
allele num: 2288
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.94777e5

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

BaseQRankSum
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SIO_000300: -1.026e0

InbreedingCoeff
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SIO_000300: -7.06e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

FS
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SIO_000300: 0.0e0

QD
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SIO_000300: 9.85e0

ClippingRankSum
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 2.31e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 1.248751248751249e-4
allele num: 8008
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.487e1

InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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DP
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MQRankSum
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SIO_000300: -7.36e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 3.108348134991119e-3
allele num: 2252
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 21
allele frequency: 2.357431522227212e-3
allele num: 8908
num of homozygotes: 0

MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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Other
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FS
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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East Asian
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Other
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QD
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MQ
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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MQRankSum
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QD
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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Other
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South Asian
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East Asian
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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Other
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Latino
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European (Finnish)
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South Asian
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BaseQRankSum
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FS
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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DP
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South Asian
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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Latino
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allele frequency: 0.0e0
allele num: 900
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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DP
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 13682
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Latino
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allele num: 1202
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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Other
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South Asian
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European (Non-Finnish)
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allele num: 17882
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African
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European (Finnish)
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DP
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MQ
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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Other
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African
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European (Non-Finnish)
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East Asian
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South Asian
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DP
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FS
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.147227533460803e-4
allele num: 26150
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.05e-2

MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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FS
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 3.049942813572246e-3
allele num: 5246
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.646707023557727e-5
allele num: 27422
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 3.58e-1

InbreedingCoeff
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SIO_000300: -1.09e-2

FS
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 2.31e-1

QD
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VQSLOD
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.17978e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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allele frequency: 6.792094002580996e-5
allele num: 29446
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.829e1

MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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FS
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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African
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East Asian
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Other
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European (Finnish)
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MQ
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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East Asian
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Other
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South Asian
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African
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European (Finnish)
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MQRankSum
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MQ
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QD
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.202535292422933e-5
allele num: 13884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 49592
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4152
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.239473e6

BaseQRankSum
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SIO_000300: 2.06e0

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.007e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 9.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.73e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.957636740926354e-5
allele num: 51082
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.103281716152862e-5
allele num: 14078
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.263861e6

VQSLOD
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SIO_000300: -3.018e-1

InbreedingCoeff
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MQRankSum
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MQ
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SIO_000300: 5.917e1

ReadPosRankSum
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SIO_000300: -4.41e-1

ClippingRankSum
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SIO_000300: -1.62e-1

BaseQRankSum
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SIO_000300: 2.24e0

FS
type: SiteQuality
SIO_000300: 4.867e0

QD
type: SiteQuality
SIO_000300: 1.599e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.742160278745645e-5
allele num: 57400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.012e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.368978e6

MQ
type: SiteQuality
SIO_000300: 5.8e1

QD
type: SiteQuality
SIO_000300: 1.036e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.921e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.747e0

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.451727589658624e-5
allele num: 57942
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 1.351e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.398e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

InbreedingCoeff
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SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.380183e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.702301511643742e-5
allele num: 58744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -1.316e0

ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.445e1

DP
type: SiteQuality
SIO_000300: 1.396294e6

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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variant carriers: 23

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1057
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Latino
type: Population
allele count: 13
allele frequency: 1.21200820436323e-3
allele num: 10726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62230
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.369426751592356e-5
allele num: 15700
num of homozygotes: 0

Other
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 221
allele frequency: 2.254181966544268e-2
allele num: 9804
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.262307498106539e-4
allele num: 15844
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.609e0

DP
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FS
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InbreedingCoeff
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SIO_000300: -1.2e-3

MQRankSum
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ClippingRankSum
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SIO_000300: -5.86e-1

ReadPosRankSum
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QD
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SIO_000300: 1.633e1

VQSLOD
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SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

African
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South Asian
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allele frequency: 3.738317757009346e-4
allele num: 16050
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MQ
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SIO_000300: 5.928e1

FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.64e-1

DP
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SIO_000300: 1.517411e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 64322
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.517411e6

ClippingRankSum
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SIO_000300: 8.69e-1

VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.5e-3

MQ
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BaseQRankSum
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MQRankSum
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SIO_000300: -8.69e-1

ReadPosRankSum
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SIO_000300: -3.05e-1

QD
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SIO_000300: 1.276e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 64794
num of homozygotes: 0

FS
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64938
num of homozygotes: 0

African
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allele count: 0
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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European (Finnish)
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Other
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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VQSLOD
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ClippingRankSum
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FS
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.531018433461939e-5
allele num: 65316
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European (Finnish)
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Other
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South Asian
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African
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Latino
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num of homozygotes: 0

East Asian
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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allele frequency: 0.0e0
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African
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allele num: 10382
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South Asian
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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SIO_000300: -2.43e-1

MQ
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SIO_000300: 5.918e1

QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 11570
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South Asian
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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VQSLOD
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FS
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MQ
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QD
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MQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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allele num: 16496
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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ClippingRankSum
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QD
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
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ReadPosRankSum
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SIO_000300: -1.43e-1

GenotypeDepth
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variant carriers: 30

GenotypeDepth
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variant carriers: 2631

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 58

African
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allele frequency: 5.14524817237399e-1
allele num: 10396
num of homozygotes: 1382

South Asian
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allele frequency: 7.52302472127969e-1
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num of homozygotes: 4690

East Asian
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allele frequency: 7.164040778498609e-1
allele num: 8632
num of homozygotes: 2236

European (Non-Finnish)
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allele frequency: 7.217991004497751e-1
allele num: 66700
num of homozygotes: 17368

Latino
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allele frequency: 7.673233108691896e-1
allele num: 11574
num of homozygotes: 3453

Other
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allele frequency: 7.267699115044248e-1
allele num: 904
num of homozygotes: 242

European (Finnish)
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allele count: 5098
allele frequency: 7.710223835450696e-1
allele num: 6612
num of homozygotes: 1977

FS
type: SiteQuality
SIO_000300: 1.237e0

InbreedingCoeff
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VQSLOD
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DP
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SIO_000300: 5.516084e6

MQRankSum
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SIO_000300: 9.7e-2

MQ
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SIO_000300: 5.957e1

ReadPosRankSum
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SIO_000300: 2.67e-1

ClippingRankSum
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SIO_000300: -2.35e-1

QD
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SIO_000300: 2.295e1

BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66700
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East Asian
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South Asian
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allele frequency: 1.33301017935046e-3
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African
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DP
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SIO_000300: 5.516084e6

MQ
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 7.494903465643362e-5
allele num: 66712
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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FS
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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African
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East Asian
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South Asian
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Other
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ClippingRankSum
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QD
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele num: 11576
num of homozygotes: 0

Other
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African
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European (Non-Finnish)
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allele frequency: 1.948499655265446e-4
allele num: 66718
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.972e1

DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66718
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East Asian
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Latino
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European (Finnish)
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African
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South Asian
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Other
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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FS
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MQ
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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East Asian
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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MQ
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ClippingRankSum
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QD
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MQRankSum
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DP
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InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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allele num: 6614
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Other
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European (Non-Finnish)
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South Asian
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MQRankSum
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MQ
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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DP
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.445e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.72e-1

DP
type: SiteQuality
SIO_000300: 3.035486e6

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

GenotypeDepth
all individuals: 624
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8167
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5501
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1948
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5902
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8087
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2936
bin: 6.25e1
variant carriers: 0

GenotypeDepth
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bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8451
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 482
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3065
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 949
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4412
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.057e0

ClippingRankSum
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SIO_000300: -1.342e0

QD
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SIO_000300: 8.76e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

VQSLOD
type: SiteQuality
SIO_000300: -6.403e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.753e0

DP
type: SiteQuality
SIO_000300: 3.035589e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeDepth
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bin: 7.25e1
variant carriers: 1

GenotypeDepth
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bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 8087
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 927
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2936
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1947
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8168
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8452
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5901
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3525
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35990
bin: 9.75e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.099e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.035719e6

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.195e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

QD
type: SiteQuality
SIO_000300: 2.196e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

GenotypeDepth
all individuals: 8449
bin: 4.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35985
bin: 9.75e1
variant carriers: 2