X-48826680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048826680
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048826680
    reference: chr 0
allele count: 2
allele frequency: 3.42448161909491e-5
allele num: 58403
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000102057
  ensembl protein: ENSP00000218176
  ensembl transcript: ENST00000218176
  gene symbol: KCND1
  hgvsc: ENST00000218176.3:c.-2C>T
  variant of: http://identifiers.org/hgnc/6237
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: DP
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X-48826686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048826686
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048826686
    reference: chr 0
allele count: 2
allele frequency: 3.480500495971321e-5
allele num: 57463
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000102057
  ensembl protein: ENSP00000218176
  ensembl transcript: ENST00000218176
  gene symbol: KCND1
  hgvsc: ENST00000218176.3:c.-8G>A
  variant of: http://identifiers.org/hgnc/6237
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
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site quality: MQ
site quality: BaseQRankSum
site quality: FS
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X-48826701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048826701
    reference: chr 0
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    type: ExactPosition
    position: 24048826701
    reference: chr 0
allele count: 2
allele frequency: 3.684259003407939e-5
allele num: 54285
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000102057
  ensembl protein: ENSP00000218176
  ensembl transcript: ENST00000218176
  gene symbol: KCND1
  hgvsc: ENST00000218176.3:c.-23C>T
  variant of: http://identifiers.org/hgnc/6237
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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X-48826703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
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    position: 24048826703
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allele count: 0
allele frequency: 0.0e0
allele num: 54241
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000102057
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  gene symbol: KCND1
  hgvsc: ENST00000218176.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/6237
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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site quality: InbreedingCoeff
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X-48826713-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
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    position: 24048826713
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 51026
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000102057
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  ensembl transcript: ENST00000218176
  gene symbol: KCND1
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  variant of: http://identifiers.org/hgnc/6237
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4553
  num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 2124
  num of homozygotes: 0
population: South Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 5439
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-48830568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830568
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830568
    reference: chr 0
allele count: 390
allele frequency: 7.579880276762808e-3
allele num: 51452
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.*37C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 2
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
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site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
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X-48830569-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830569
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830569
    reference: chr 0
allele count: 2
allele frequency: 3.907318407377017e-5
allele num: 51186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.*36A>G
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.*36A>G
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.*36A>G
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

X-48830578-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830578
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830578
    reference: chr 0
allele count: 1
allele frequency: 1.842978252856616e-5
allele num: 54260
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.*27C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.*27C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.*27C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

X-48830580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830580
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830580
    reference: chr 0
allele count: 4
allele frequency: 7.289028190316526e-5
allele num: 54877
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.*25C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.*25C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.*25C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2586
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3828
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

X-48830597-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830597
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830597
    reference: chr 0
allele count: 1
allele frequency: 1.579454456430749e-5
allele num: 63313
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.*8C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.*8C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20255
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 30
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-48830599-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830599
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830599
    reference: chr 0
allele count: 1
allele frequency: 1.546862190047489e-5
allele num: 64647
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.*6T>G
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.*6T>G
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.*6T>G
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23265
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 369
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  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

X-48830606-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830606
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830606
    reference: chr 0
allele count: 220
allele frequency: 3.241920985543979e-3
allele num: 67861
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2432A>G
  hgvsp: ENST00000376425.3:c.2432A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2525A>G
  hgvsp: ENST00000376441.1:c.2525A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2390A>G
  hgvsp: ENST00000376444.3:c.2390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 30
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2271
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hgvs: p.Ter842Ter
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

X-48830613-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830613
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830613
    reference: chr 0
allele count: 1
allele frequency: 1.416992574958907e-5
allele num: 70572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2425A>G
  hgvsp: ENSP00000365608.3:p.Thr809Ala
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2518A>G
  hgvsp: ENSP00000365624.1:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2383A>G
  hgvsp: ENSP00000365627.3:p.Thr795Ala
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 600
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr840Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

X-48830620-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830620
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830620
    reference: chr 0
allele count: 1
allele frequency: 1.367446567025393e-5
allele num: 73129
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2511A>C
  hgvsp: ENST00000376441.1:c.2511A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2376A>C
  hgvsp: ENST00000376444.3:c.2376A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2418A>C
  hgvsp: ENST00000376425.3:c.2418A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro837Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-48830622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830622
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830622
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 73794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2374C>T
  hgvsp: ENSP00000365627.3:p.Pro792Ser
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2416C>T
  hgvsp: ENSP00000365608.3:p.Pro806Ser
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2509C>T
  hgvsp: ENSP00000365624.1:p.Pro837Ser
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro837Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

X-48830649-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830649
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830649
    reference: chr 0
allele count: 1
allele frequency: 1.280573697016263e-5
allele num: 78090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2389G>C
  hgvsp: ENSP00000365608.3:p.Val797Leu
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2482G>C
  hgvsp: ENSP00000365624.1:p.Val828Leu
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2347G>C
  hgvsp: ENSP00000365627.3:p.Val783Leu
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
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  variant carriers: 0
hgvs: p.Val828Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum

X-48830649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830649
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830649
    reference: chr 0
allele count: 1
allele frequency: 1.280573697016263e-5
allele num: 78090
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2482G>A
  hgvsp: ENSP00000365624.1:p.Val828Met
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2347G>A
  hgvsp: ENSP00000365627.3:p.Val783Met
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2389G>A
  hgvsp: ENSP00000365608.3:p.Val797Met
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val828Met
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

X-48830650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830650
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830650
    reference: chr 0
allele count: 6
allele frequency: 7.689350249903884e-5
allele num: 78030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2388C>T
  hgvsp: ENST00000376425.3:c.2388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2346C>T
  hgvsp: ENST00000376444.3:c.2346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2481C>T
  hgvsp: ENST00000376441.1:c.2481C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 610
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Cys827Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

X-48830661-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830661
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830661
    reference: chr 0
allele count: 2
allele frequency: 2.579081073413543e-5
allele num: 77547
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2377A>G
  hgvsp: ENSP00000365608.3:p.Ser793Gly
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2335A>G
  hgvsp: ENSP00000365627.3:p.Ser779Gly
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2470A>G
  hgvsp: ENSP00000365624.1:p.Ser824Gly
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 403
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser824Gly
num of homozygotes: 1
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

X-48830666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830666
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830666
    reference: chr 0
allele count: 10
allele frequency: 1.300018200254804e-4
allele num: 76922
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2330G>A
  hgvsp: ENSP00000365627.3:p.Arg777Gln
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2465G>A
  hgvsp: ENSP00000365624.1:p.Arg822Gln
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2372G>A
  hgvsp: ENSP00000365608.3:p.Arg791Gln
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32332
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1413
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  variant carriers: 8
hgvs: p.Arg822Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

X-48830680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830680
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830680
    reference: chr 0
allele count: 1
allele frequency: 1.33700564216381e-5
allele num: 74794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2316C>T
  hgvsp: ENST00000376444.3:c.2316C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2451C>T
  hgvsp: ENST00000376441.1:c.2451C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2358C>T
  hgvsp: ENST00000376425.3:c.2358C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28038
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser817Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
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site quality: BaseQRankSum

X-48830694-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830694
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830694
    reference: chr 0
allele count: 1
allele frequency: 1.412090317296694e-5
allele num: 70817
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2437A>T
  hgvsp: ENSP00000365624.1:p.Met813Leu
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2302A>T
  hgvsp: ENSP00000365627.3:p.Met768Leu
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2344A>T
  hgvsp: ENSP00000365608.3:p.Met782Leu
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met813Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
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site quality: QD

X-48830702-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830702
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830702
    reference: chr 0
allele count: 1
allele frequency: 1.477366741519915e-5
allele num: 67688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-5C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-5C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-5C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.2434-5C>T
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
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X-48830708-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830708
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830708
    reference: chr 0
allele count: 2
allele frequency: 3.007790176557283e-5
allele num: 66494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-11T>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-11T>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-11T>C
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
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site quality: FS
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site quality: QD
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X-48830711-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830711
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830711
    reference: chr 0
allele count: 3
allele frequency: 4.615029613106684e-5
allele num: 65005
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-14C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-14C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-14C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
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site quality: FS
site quality: ClippingRankSum

X-48830721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830721
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830721
    reference: chr 0
allele count: 1
allele frequency: 1.625117821042025e-5
allele num: 61534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-24C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-24C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-24C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 91
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

X-48830733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830733
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830733
    reference: chr 0
allele count: 2
allele frequency: 3.523297806747115e-5
allele num: 56765
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-36C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-36C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-36C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
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site quality: VQSLOD
site quality: QD

X-48830733-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830733
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830733
    reference: chr 0
allele count: 1
allele frequency: 1.761648903373558e-5
allele num: 56765
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-36C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-36C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-36C>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

X-48830734-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830734
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830734
    reference: chr 0
allele count: 2
allele frequency: 3.531821713639895e-5
allele num: 56628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-37C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-37C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-37C>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 421
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-48830741-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830741
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830741
    reference: chr 0
allele count: 9
allele frequency: 1.674512065789719e-4
allele num: 53747
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-44G>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-44G>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-44G>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 9
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
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site quality: ClippingRankSum

X-48830747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048830747
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048830747
    reference: chr 0
allele count: 1
allele frequency: 1.972775695403433e-5
allele num: 50690
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2434-50G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2299-50G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2341-50G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

X-48831516-GTA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831516
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831514
    reference: chr 0
allele count: 1
allele frequency: 1.584183511818009e-5
allele num: 63124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+49_2298+50delTA
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+49_2433+50delTA
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+49_2340+50delTA
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: GTA
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-48831517-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831517
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831517
    reference: chr 0
allele count: 122
allele frequency: 2.149779735682819e-3
allele num: 56750
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+50A>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+50A>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+50A>C
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 9182
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 8
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-48831518-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831518
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831518
    reference: chr 0
allele count: 1
allele frequency: 1.615978798358166e-5
allele num: 61882
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+49T>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+49T>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+49T>C
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
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site quality: DP
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X-48831521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831521
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831521
    reference: chr 0
allele count: 4
allele frequency: 6.448804552856014e-5
allele num: 62027
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+46G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+46G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
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  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+46G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
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site quality: MQRankSum
site quality: QD
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X-48831525-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831525
    reference: chr 0
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    type: ExactPosition
    position: 24048831525
    reference: chr 0
allele count: 6
allele frequency: 1.001234856322798e-4
allele num: 59926
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+42A>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+42A>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
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  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
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  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+42A>C
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
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X-48831537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831537
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831537
    reference: chr 0
allele count: 1
allele frequency: 1.551542232979582e-5
allele num: 64452
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+30G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+30G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
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  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+30G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
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site quality: ClippingRankSum
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X-48831542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831542
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831542
    reference: chr 0
allele count: 1
allele frequency: 1.5354614829487e-5
allele num: 65127
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+25C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+25C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+25C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4821
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-48831544-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831544
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831544
    reference: chr 0
allele count: 1
allele frequency: 1.528654631059205e-5
allele num: 65417
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+23C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+23C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+23C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 185
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  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

X-48831544-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831544
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831544
    reference: chr 0
allele count: 3
allele frequency: 4.585963893177614e-5
allele num: 65417
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2298+23C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2340+23C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2433+23C>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

X-48831590-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831590
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831590
    reference: chr 0
allele count: 1
allele frequency: 1.355950589160531e-5
allele num: 73749
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2275A>G
  hgvsp: ENSP00000365627.3:p.Thr759Ala
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2317A>G
  hgvsp: ENSP00000365608.3:p.Thr773Ala
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2410A>G
  hgvsp: ENSP00000365624.1:p.Thr804Ala
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 483
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  variant carriers: 0
hgvs: p.Thr804Ala
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

X-48831645-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831645
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831645
    reference: chr 0
allele count: 1
allele frequency: 1.247847463126108e-5
allele num: 80138
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2355C>T
  hgvsp: ENST00000376441.1:c.2355C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2262C>T
  hgvsp: ENST00000376425.3:c.2262C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2220C>T
  hgvsp: ENST00000376444.3:c.2220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4924
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp785Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-48831645-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831645
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831645
    reference: chr 0
allele count: 1
allele frequency: 1.247847463126108e-5
allele num: 80138
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2355C>A
  hgvsp: ENSP00000365624.1:p.Asp785Glu
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2220C>A
  hgvsp: ENSP00000365627.3:p.Asp740Glu
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2262C>A
  hgvsp: ENSP00000365608.3:p.Asp754Glu
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 33562
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  variant carriers: 0
hgvs: p.Asp785Glu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum

X-48831648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831648
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831648
    reference: chr 0
allele count: 412
allele frequency: 5.118139581107605e-3
allele num: 80498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2259C>T
  hgvsp: ENST00000376425.3:c.2259C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2217C>T
  hgvsp: ENST00000376444.3:c.2217C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2352C>T
  hgvsp: ENST00000376441.1:c.2352C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly784Gly
num of homozygotes: 4
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

X-48831663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831663
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831663
    reference: chr 0
allele count: 38
allele frequency: 4.634655023112293e-4
allele num: 81991
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2244C>T
  hgvsp: ENST00000376425.3:c.2244C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2202C>T
  hgvsp: ENST00000376444.3:c.2202C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2337C>T
  hgvsp: ENST00000376441.1:c.2337C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp779Asp
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-48831686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831686
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831686
    reference: chr 0
allele count: 2
allele frequency: 2.417561164297457e-5
allele num: 82728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2179G>A
  hgvsp: ENSP00000365627.3:p.Gly727Arg
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2221G>A
  hgvsp: ENSP00000365608.3:p.Gly741Arg
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2314G>A
  hgvsp: ENSP00000365624.1:p.Gly772Arg
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly772Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

X-48831687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831687
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 82723
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2313C>T
  hgvsp: ENST00000376441.1:c.2313C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2178C>T
  hgvsp: ENST00000376444.3:c.2178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2220C>T
  hgvsp: ENST00000376425.3:c.2220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 167
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  variant carriers: 0
hgvs: p.Ser771Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

X-48831689-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831689
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831689
    reference: chr 0
allele count: 1
allele frequency: 1.20751071665761e-5
allele num: 82815
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2176A>G
  hgvsp: ENSP00000365627.3:p.Ser726Gly
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2218A>G
  hgvsp: ENSP00000365608.3:p.Ser740Gly
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2311A>G
  hgvsp: ENSP00000365624.1:p.Ser771Gly
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser771Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-48831691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831691
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831691
    reference: chr 0
allele count: 2
allele frequency: 2.416042522348393e-5
allele num: 82780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2174G>A
  hgvsp: ENSP00000365627.3:p.Arg725His
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2216G>A
  hgvsp: ENSP00000365608.3:p.Arg739His
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2309G>A
  hgvsp: ENSP00000365624.1:p.Arg770His
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg770His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

X-48831704-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831704
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831704
    reference: chr 0
allele count: 7
allele frequency: 8.530967411704488e-5
allele num: 82054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2203G>A
  hgvsp: ENSP00000365608.3:p.Gly735Ser
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2296G>A
  hgvsp: ENSP00000365624.1:p.Gly766Ser
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2161G>A
  hgvsp: ENSP00000365627.3:p.Gly721Ser
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly766Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-48831713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831713
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831713
    reference: chr 0
allele count: 1
allele frequency: 1.217344727679984e-5
allele num: 82146
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2287G>A
  hgvsp: ENSP00000365624.1:p.Val763Met
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2152G>A
  hgvsp: ENSP00000365627.3:p.Val718Met
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2194G>A
  hgvsp: ENSP00000365608.3:p.Val732Met
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val763Met
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

X-48831728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831728
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831728
    reference: chr 0
allele count: 22
allele frequency: 2.709826817431577e-4
allele num: 81186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-7C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-7C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-7C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.2279-7C>T
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

X-48831732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831732
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831732
    reference: chr 0
allele count: 2
allele frequency: 2.471179864826462e-5
allele num: 80933
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-11G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-11G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-11G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

X-48831746-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831746
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831745
    reference: chr 0
allele count: 24
allele frequency: 3.025451611683286e-4
allele num: 79327
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-26delG
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-26delG
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-26delG
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: AC
site quality: VQSLOD
site quality: BaseQRankSum
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site quality: InbreedingCoeff
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site quality: DP

X-48831751-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831751
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831751
    reference: chr 0
allele count: 1
allele frequency: 1.267652054863981e-5
allele num: 78886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-30G>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-30G>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-30G>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
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X-48831753-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831753
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831753
    reference: chr 0
allele count: 1
allele frequency: 1.273171725402322e-5
allele num: 78544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-32G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-32G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-32G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

X-48831772-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831772
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831772
    reference: chr 0
allele count: 4
allele frequency: 5.431093007467753e-5
allele num: 73650
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-51G>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-51G>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-51G>C
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
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X-48831773-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048831773
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048831773
    reference: chr 0
allele count: 1
allele frequency: 1.352722353736895e-5
allele num: 73925
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2186-52G>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2279-52G>C
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2144-52G>C
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
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X-48832382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832382
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832382
    reference: chr 0
allele count: 1
allele frequency: 1.291922898041445e-5
allele num: 77404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+48G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+48G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+48G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
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X-48832386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832386
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832386
    reference: chr 0
allele count: 1
allele frequency: 1.28157479911315e-5
allele num: 78029
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+44C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+44C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+44C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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site quality: QD
site quality: BaseQRankSum
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site quality: MQ
site quality: DP

X-48832392-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832392
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832392
    reference: chr 0
allele count: 5
allele frequency: 6.378039135648136e-5
allele num: 78394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+38C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+38C>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000068400
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  gene symbol: GRIPAP1
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  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
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X-48832392-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832392
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832392
    reference: chr 0
allele count: 1
allele frequency: 1.275607827129627e-5
allele num: 78394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+38C>G
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+38C>G
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+38C>G
  variant of: http://identifiers.org/hgnc/18706
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
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site quality: BaseQRankSum
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X-48832395-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832395
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832395
    reference: chr 0
allele count: 1
allele frequency: 1.272264631043257e-5
allele num: 78600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+35C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+35C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+35C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
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site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

X-48832412-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832412
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832412
    reference: chr 0
allele count: 2
allele frequency: 2.481635894381576e-5
allele num: 80592
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+18G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+18G>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+18G>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
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site quality: VQSLOD
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site quality: FS
site quality: DP
site quality: MQ
site quality: QD

X-48832413-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832413
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832413
    reference: chr 0
allele count: 2
allele frequency: 2.467399484313508e-5
allele num: 81057
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+17C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+17C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
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  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+17C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
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site quality: QD

X-48832418-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832418
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832418
    reference: chr 0
allele count: 1
allele frequency: 1.217893288190089e-5
allele num: 82109
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+12C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+12C>T
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+12C>T
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
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site quality: QD

X-48832422-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832422
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832422
    reference: chr 0
allele count: 1
allele frequency: 1.210829660483363e-5
allele num: 82588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2143+8T>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2185+8T>A
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
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  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2278+8T>A
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29600
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.25e1
  variant carriers: 0
hgvs: c.2278+8T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

X-48832431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832431
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832431
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 83598
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2277C>T
  hgvsp: ENST00000376441.1:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2184C>T
  hgvsp: ENST00000376425.3:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2142C>T
  hgvsp: ENST00000376444.3:c.2142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
hgvs: c.2277C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

X-48832435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832435
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832435
    reference: chr 0
allele count: 1
allele frequency: 1.18962645729241e-5
allele num: 84060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2138G>A
  hgvsp: ENSP00000365627.3:p.Arg713Gln
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2180G>A
  hgvsp: ENSP00000365608.3:p.Arg727Gln
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2273G>A
  hgvsp: ENSP00000365624.1:p.Arg758Gln
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 877
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  variant carriers: 0
hgvs: p.Arg758Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

X-48832449-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832449
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832449
    reference: chr 0
allele count: 1
allele frequency: 1.173888034559264e-5
allele num: 85187
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2259C>T
  hgvsp: ENST00000376441.1:c.2259C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2124C>T
  hgvsp: ENST00000376444.3:c.2124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2166C>T
  hgvsp: ENST00000376425.3:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr753Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-48832452-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832452
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832452
    reference: chr 0
allele count: 1
allele frequency: 1.172236744933007e-5
allele num: 85307
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2163C>G
  hgvsp: ENST00000376425.3:c.2163C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2256C>G
  hgvsp: ENST00000376441.1:c.2256C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2121C>G
  hgvsp: ENST00000376444.3:c.2121C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr752Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-48832454-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832454
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832454
    reference: chr 0
allele count: 1
allele frequency: 1.171399119107862e-5
allele num: 85368
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2254A>G
  hgvsp: ENSP00000365624.1:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2161A>G
  hgvsp: ENSP00000365608.3:p.Thr721Ala
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2119A>G
  hgvsp: ENSP00000365627.3:p.Thr707Ala
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 178
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  variant carriers: 0
hgvs: p.Thr752Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

X-48832466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832466
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832466
    reference: chr 0
allele count: 1
allele frequency: 1.171056175564742e-5
allele num: 85393
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2242G>A
  hgvsp: ENSP00000365624.1:p.Ala748Thr
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2107G>A
  hgvsp: ENSP00000365627.3:p.Ala703Thr
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2149G>A
  hgvsp: ENSP00000365608.3:p.Ala717Thr
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 178
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hgvs: p.Ala748Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

X-48832467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832467
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832467
    reference: chr 0
allele count: 1
allele frequency: 1.17155007790808e-5
allele num: 85357
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2241C>T
  hgvsp: ENST00000376441.1:c.2241C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2148C>T
  hgvsp: ENST00000376425.3:c.2148C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2106C>T
  hgvsp: ENST00000376444.3:c.2106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser747Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

X-48832485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832485
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832485
    reference: chr 0
allele count: 1
allele frequency: 1.181963240943207e-5
allele num: 84605
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2130G>A
  hgvsp: ENST00000376425.3:c.2130G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2223G>A
  hgvsp: ENST00000376441.1:c.2223G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2088G>A
  hgvsp: ENST00000376444.3:c.2088G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4124
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu741Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

X-48832494-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832494
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832494
    reference: chr 0
allele count: 1
allele frequency: 1.19256317603425e-5
allele num: 83853
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2079C>T
  hgvsp: ENST00000376444.3:c.2079C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2214C>T
  hgvsp: ENST00000376441.1:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2121C>T
  hgvsp: ENST00000376425.3:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser738Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

X-48832503-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24048832503
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24048832503
    reference: chr 0
allele count: 1
allele frequency: 1.2081964044075e-5
allele num: 82768
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365624
  ensembl transcript: ENST00000376441
  gene symbol: GRIPAP1
  hgvsc: ENST00000376441.1:c.2205C>T
  hgvsp: ENST00000376441.1:c.2205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365608
  ensembl transcript: ENST00000376425
  gene symbol: GRIPAP1
  hgvsc: ENST00000376425.3:c.2112C>T
  hgvsp: ENST00000376425.3:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068400
  ensembl protein: ENSP00000365627
  ensembl transcript: ENST00000376444
  gene symbol: GRIPAP1
  hgvsc: ENST00000376444.3:c.2070C>T
  hgvsp: ENST00000376444.3:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser735Ser
num of homozygotes: 0
reference allele: G

African
type: Population
allele count: 1
allele frequency: 1.932367149758454e-4
allele num: 5175
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.187352584942946e-5
allele num: 31374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.681e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.484e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.58e-1

DP
type: SiteQuality
SIO_000300: 8.5768e5

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 6.543e0

QD
type: SiteQuality
SIO_000300: 1.465e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5053
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

DP
type: SiteQuality
SIO_000300: 8.32717e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.925e0

FS
type: SiteQuality
SIO_000300: 9.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

QD
type: SiteQuality
SIO_000300: 1.277e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2301
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 357
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4834
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.19e-2

FS
type: SiteQuality
SIO_000300: 6.405e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.632e1

DP
type: SiteQuality
SIO_000300: 7.25284e5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29341
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.303e0

VQSLOD
type: SiteQuality
SIO_000300: -8.465e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.735e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

FS
type: SiteQuality
SIO_000300: 4.603e0

DP
type: SiteQuality
SIO_000300: 7.24537e5

QD
type: SiteQuality
SIO_000300: 1.773e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27657
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6319
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.167e0

QD
type: SiteQuality
SIO_000300: 1.706e1

DP
type: SiteQuality
SIO_000300: 6.47122e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.09e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.811e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.475e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 1093
bin: 6.75e1
variant carriers: 7

European (Finnish)
type: Population
allele count: 10
allele frequency: 5.13874614594039e-3
allele num: 1946
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 1.41643059490085e-2
allele num: 353
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 4.889056036103798e-3
allele num: 5318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 305
allele frequency: 1.089285714285714e-2
allele num: 28000
num of homozygotes: 2

African
type: Population
allele count: 13
allele frequency: 2.140270003292723e-3
allele num: 6074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4345
num of homozygotes: 0

South Asian
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allele count: 31
allele frequency: 5.723781388478582e-3
allele num: 5416
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.7942e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

QD
type: SiteQuality
SIO_000300: 1.762e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.734e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.606e0

GenotypeQuality
all individuals: 168
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 351
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4286
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1922
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 27895
num of homozygotes: 0

African
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allele count: 2
allele frequency: 3.305238803503553e-4
allele num: 6051
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5381
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 7.62e0

MQRankSum
type: SiteQuality
SIO_000300: 7.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.83345e5

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 375
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2075
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6261
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.38810774182619e-5
allele num: 29515
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5757
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5721
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 8.46433e5

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 2.994e1

GenotypeQuality
all individuals: 1441
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4619
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5795
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29838
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 6.348198698619266e-4
allele num: 6301
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2108
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

DP
type: SiteQuality
SIO_000300: 8.6165e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.194e0

QD
type: SiteQuality
SIO_000300: 1.401e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

GenotypeQuality
all individuals: 526
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6919
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34443
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.419244961680386e-4
allele num: 7046
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.59e-1

MQRankSum
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ReadPosRankSum
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FS
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MQ
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 7014
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 6807
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 7213
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European (Non-Finnish)
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allele frequency: 2.841474156792544e-5
allele num: 35193
num of homozygotes: 0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5660
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European (Finnish)
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allele frequency: 1.363803907113896e-2
allele num: 2713
num of homozygotes: 1

Latino
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allele frequency: 1.058341050403493e-3
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South Asian
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allele frequency: 2.082176568573015e-3
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Other
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allele frequency: 1.075268817204301e-2
allele num: 465
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African
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allele frequency: 1.383891502906172e-4
allele num: 7226
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European (Non-Finnish)
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allele count: 154
allele frequency: 4.158340983960685e-3
allele num: 37034
num of homozygotes: 0

MQ
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 1.016e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2846
num of homozygotes: 0

East Asian
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African
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allele frequency: 1.34661998384056e-4
allele num: 7426
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Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7843
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 38589
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South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.153854e6

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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FS
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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MQ
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MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3031
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European (Non-Finnish)
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allele frequency: 2.494076568150642e-5
allele num: 40095
num of homozygotes: 0

African
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East Asian
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South Asian
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Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.33e1

VQSLOD
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3061
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40497
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 510
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African
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QD
type: SiteQuality
SIO_000300: 2.617e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.211986e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3354
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43070
num of homozygotes: 0

Latino
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allele frequency: 1.17000117000117e-4
allele num: 8547
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 528
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.6e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.287073e6

MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 1.17000117000117e-4
allele num: 8547
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43070
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African
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allele frequency: 0.0e0
allele num: 7845
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European (Finnish)
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allele frequency: 0.0e0
allele num: 3354
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South Asian
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East Asian
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Other
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allele frequency: 0.0e0
allele num: 528
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FS
type: SiteQuality
SIO_000300: 8.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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DP
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InbreedingCoeff
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SIO_000300: 1.3e-3

BaseQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 1.171097318187141e-4
allele num: 8539
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3347
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.323204163181861e-5
allele num: 43044
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South Asian
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allele frequency: 1.183431952662722e-4
allele num: 8450
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African
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allele frequency: 3.826530612244898e-4
allele num: 7840
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Other
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ReadPosRankSum
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QD
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.680880941793246e-5
allele num: 42727
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Latino
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European (Finnish)
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
type: SiteQuality
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FS
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ClippingRankSum
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QD
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MQ
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele num: 8410
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.36116358141292e-4
allele num: 42352
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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Other
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 3179
num of homozygotes: 0

Latino
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East Asian
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European (Non-Finnish)
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African
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Other
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South Asian
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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FS
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QD
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MQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele frequency: 1.297858533419857e-4
allele num: 7705
num of homozygotes: 0

East Asian
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Other
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African
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Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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BaseQRankSum
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MQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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East Asian
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African
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 2.706067002218975e-5
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num of homozygotes: 0

FS
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InbreedingCoeff
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QD
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MQRankSum
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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bin: 6.25e1
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East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 449
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7092
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European (Finnish)
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allele frequency: 0.0e0
allele num: 2745
num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35441
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 439
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East Asian
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allele count: 3
allele frequency: 5.593884020137983e-4
allele num: 5363
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South Asian
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allele frequency: 0.0e0
allele num: 7103
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 7009
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2659
num of homozygotes: 0

QD
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InbreedingCoeff
type: SiteQuality
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MQ
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DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.05e-1

FS
type: SiteQuality
SIO_000300: 8.669e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele frequency: 1.503533303262667e-4
allele num: 6651
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 33398
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 5123
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 6738
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Other
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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DP
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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MQ
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VQSLOD
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SIO_000300: 1.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30652
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 381
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2148
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East Asian
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allele frequency: 4.207868714496107e-4
allele num: 4753
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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FS
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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BaseQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -1.906e0

QD
type: SiteQuality
SIO_000300: 1.966e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4753
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6121
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 381
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 6421
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2148
num of homozygotes: 0

South Asian
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allele frequency: 1.590077913817777e-4
allele num: 6289
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30652
num of homozygotes: 0

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.72712e5

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.966e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 379
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East Asian
type: Population
allele count: 2
allele frequency: 4.199916001679967e-4
allele num: 4762
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30558
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6404
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2149
num of homozygotes: 0

BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -3.186e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.0565e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 7.71786e5

QD
type: SiteQuality
SIO_000300: 2.115e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 5941
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4593
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2007
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 359
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European (Non-Finnish)
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allele count: 9
allele frequency: 3.107734806629834e-4
allele num: 28960
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5725
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.95e-1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1881
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5641
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European (Non-Finnish)
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allele count: 1
allele frequency: 3.668109456386178e-5
allele num: 27262
num of homozygotes: 0

Latino
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.23e-2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 414
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Latino
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allele frequency: 0.0e0
allele num: 7486
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2540
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African
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allele frequency: 1.463486023708474e-4
allele num: 6833
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East Asian
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allele count: 0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35883
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South Asian
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DP
type: SiteQuality
SIO_000300: 9.07738e5

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
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ReadPosRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 5.482456140350877e-4
allele num: 1824
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South Asian
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allele frequency: 2.296738631143776e-4
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European (Non-Finnish)
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allele count: 77
allele frequency: 2.368501999384805e-3
allele num: 32510
num of homozygotes: 0

Latino
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allele frequency: 1.420454545454545e-4
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East Asian
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allele frequency: 4.03469840629413e-4
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African
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allele frequency: 6.977149834292692e-3
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MQ
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QD
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DP
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.840263576459896e-5
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East Asian
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South Asian
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Other
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African
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European (Finnish)
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VQSLOD
type: SiteQuality
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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East Asian
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African
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Other
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MQ
type: SiteQuality
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DP
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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African
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allele frequency: 7.732755954222085e-4
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Other
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European (Non-Finnish)
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South Asian
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DP
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
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GenotypeQuality
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East Asian
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European (Finnish)
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Other
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African
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Latino
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South Asian
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European (Non-Finnish)
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QD
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.43526e5

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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South Asian
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allele frequency: 1.964250638381458e-4
allele num: 5091
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 7642
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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FS
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MQ
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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QD
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MQ
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MQRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
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SIO_000300: 9.68354e5

GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 3.896356906292616e-4
allele num: 5133
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 2627
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East Asian
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African
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allele frequency: 1.415227851684121e-4
allele num: 7066
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele frequency: 1.217433649866082e-4
allele num: 8214
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 7567
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 508
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3213
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8733
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.270611475670398e-5
allele num: 44041
num of homozygotes: 0

African
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South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 560
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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MQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

South Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8733
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.270611475670398e-5
allele num: 44041
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 560
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
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variant carriers: 12

African
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allele frequency: 4.592797088718785e-2
allele num: 7969
num of homozygotes: 4

East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 1
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Latino
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allele frequency: 4.105371193978789e-3
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European (Non-Finnish)
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allele count: 3
allele frequency: 6.783186741130983e-5
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num of homozygotes: 0

South Asian
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allele frequency: 6.687472135532769e-4
allele num: 8972
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.821e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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Latino
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allele frequency: 6.732495511669659e-4
allele num: 8912
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 1.748251748251748e-3
allele num: 572
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European (Non-Finnish)
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allele frequency: 6.877121370100051e-4
allele num: 45077
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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DP
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FS
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.456e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9021
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Other
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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QD
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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African
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Other
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South Asian
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European (Finnish)
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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Other
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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BaseQRankSum
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MQ
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QD
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MQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 2.196064652143359e-5
allele num: 45536
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East Asian
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South Asian
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African
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European (Finnish)
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Other
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Latino
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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Other
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African
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allele frequency: 8.822788001008318e-4
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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QD
type: SiteQuality
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BaseQRankSum
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MQRankSum
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

African
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Other
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Latino
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.538461538461539e-4
allele num: 6500
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InbreedingCoeff
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SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.581e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.342e0

DP
type: SiteQuality
SIO_000300: 1.332186e6

FS
type: SiteQuality
SIO_000300: 6.741e0

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.162e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3967
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 2.443087173792338e-3
allele num: 9005
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44884
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6457
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.564e0

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.278544e6

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

QD
type: SiteQuality
SIO_000300: 2.853e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 559
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3961
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.528445006321112e-4
allele num: 7910
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8997
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 44768
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.63e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.264579e6

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.08e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.073e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7649
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3904
num of homozygotes: 0

South Asian
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allele count: 24
allele frequency: 3.037205770690964e-3
allele num: 7902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43995
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6391
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8940
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.85e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 6.037e1

DP
type: SiteQuality
SIO_000300: 1.170901e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7585
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3915
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.295672454003628e-4
allele num: 7718
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.135654e6

MQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.617e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8905
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.289849098944379e-5
allele num: 43671
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7635
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7531
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.277e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.127981e6

QD
type: SiteQuality
SIO_000300: 1.48e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.565988181221273e-4
allele num: 6092
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 41096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.805e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.78e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.059265e6

MQ
type: SiteQuality
SIO_000300: 5.871e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6677
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7124
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.059992e6

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.245e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 529
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.324554266719357e-5
allele num: 43019
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3845
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7782
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8661
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.165279e6

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.934e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 535
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8723
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3894
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7435
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.30701794859964e-5
allele num: 43346
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.178767e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 1.142465440420427e-4
allele num: 8753
num of homozygotes: 0

South Asian
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allele frequency: 1.328197635808208e-4
allele num: 7529
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.823117114820951e-4
allele num: 7847
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43542
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3913
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3913
num of homozygotes: 0

African
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allele frequency: 1.274372371606984e-4
allele num: 7847
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43542
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7529
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 3923
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.291160702011639e-5
allele num: 43646
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8778
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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African
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allele count: 1
allele frequency: 1.253761283851555e-4
allele num: 7976
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.238488572515837e-5
allele num: 44673
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6435
num of homozygotes: 0

European (Finnish)
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Latino
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Other
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South Asian
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allele frequency: 2.471271469170888e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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DP
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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FS
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BaseQRankSum
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QD
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.201770223259501e-5
allele num: 45418
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Other
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East Asian
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4131
num of homozygotes: 0

MQ
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.189908899789769e-5
allele num: 45664
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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QD
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
type: SiteQuality
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FS
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DP
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QD
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 1.709401709401709e-3
allele num: 585
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 9163
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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SIO_000300: -1.047e0

BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4315
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Latino
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allele frequency: 1.086484137331595e-4
allele num: 9204
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South Asian
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allele frequency: 0.0e0
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African
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Other
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MQ
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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variant carriers: 0

Latino
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Other
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allele frequency: 0.0e0
allele num: 600
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.136432584869784e-5
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South Asian
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BaseQRankSum
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MQ
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SIO_000300: 5.974e1

ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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DP
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 2.135246514210066e-5
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African
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Latino
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East Asian
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South Asian
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FS
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DP
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele num: 9211
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East Asian
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Other
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African
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South Asian
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European (Finnish)
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 9209
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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European (Finnish)
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African
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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DP
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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Latino
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
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allele num: 582
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European (Finnish)
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South Asian
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East Asian
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African
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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FS
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ClippingRankSum
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