16-68279296-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279296
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279296
    reference: chr 16
allele count: 5
allele frequency: 4.352291916923452e-5
allele num: 114882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.14C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19313
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8090
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

16-68279300-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279300
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279300
    reference: chr 16
allele count: 13
allele frequency: 1.130946166962453e-4
allele num: 114948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.18A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-30A>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19521
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24650
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3322
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-68279302-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279302
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279302
    reference: chr 16
allele count: 58
allele frequency: 5.046901376585858e-4
allele num: 114922
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.20C>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24733
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 19555
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 2
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-68279304-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279304
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279304
    reference: chr 16
allele count: 1
allele frequency: 8.704280765280366e-6
allele num: 114886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.22C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

16-68279306-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279306
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279306
    reference: chr 16
allele count: 1
allele frequency: 8.704735376044569e-6
allele num: 114880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-24G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.24G>C
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

16-68279306-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279306
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279306
    reference: chr 16
allele count: 1
allele frequency: 8.704735376044569e-6
allele num: 114880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-24G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

16-68279308-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279308
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279308
    reference: chr 16
allele count: 1
allele frequency: 8.699585899711174e-6
allele num: 114948
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.26C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-22C>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25180
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

16-68279309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279309
    reference: chr 16
allele count: 4
allele frequency: 3.479773814702044e-5
allele num: 114950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-21C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.27C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

16-68279310-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279310
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279310
    reference: chr 16
allele count: 1
allele frequency: 8.695349726966019e-6
allele num: 115004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-20T>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.28T>C
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/16-68279312-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279312
    reference: chr 16
allele count: 1
allele frequency: 8.707615680674318e-6
allele num: 114842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.30C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-18C>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS

16-68279312-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279312
    reference: chr 16
allele count: 1
allele frequency: 8.707615680674318e-6
allele num: 114842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.30C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-18C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25379
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8001
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

16-68279315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279315
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279315
    reference: chr 16
allele count: 15
allele frequency: 1.304415882567786e-4
allele num: 114994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.33C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19521
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25499
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

16-68279323-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279323
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279323
    reference: chr 16
allele count: 1
allele frequency: 8.702159876081243e-6
allele num: 114914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.41G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-7G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP

16-68279328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279328
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279328
    reference: chr 16
allele count: 2
allele frequency: 1.743983257760725e-5
allele num: 114680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.46C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25930
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8001
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

16-68279329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279329
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279329
    reference: chr 16
allele count: 1
allele frequency: 8.720068365335985e-6
allele num: 114678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.47C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25959
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

16-68279345-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279345
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279345
    reference: chr 16
allele count: 1
allele frequency: 8.807934187115753e-6
allele num: 113534
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.16C>T
  hgvsp: ENSP00000219345.5:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.16C>T
  hgvsp: ENSP00000457034.1:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.16C>T
  hgvsp: ENSP00000394197.2:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.16C>T
  hgvsp: ENSP00000393610.2:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.16C>T
  hgvsp: ENSP00000455461.2:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.16C>T
  hgvsp: ENSP00000454557.1:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.16C>T
  hgvsp: ENSP00000454227.1:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.63C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.16C>T
  hgvsp: ENSP00000457049.1:p.Arg6Cys
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38374
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg6Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

16-68279346-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279346
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279346
    reference: chr 16
allele count: 1
allele frequency: 8.808554868488276e-6
allele num: 113526
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.17G>T
  hgvsp: ENSP00000457049.1:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.17G>T
  hgvsp: ENSP00000454227.1:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.17G>T
  hgvsp: ENSP00000457034.1:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.17G>T
  hgvsp: ENSP00000454557.1:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.17G>T
  hgvsp: ENSP00000393610.2:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.17G>T
  hgvsp: ENSP00000394197.2:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.17G>T
  hgvsp: ENSP00000219345.5:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.64G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.17G>T
  hgvsp: ENSP00000455461.2:p.Arg6Leu
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg6Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-68279355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279355
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279355
    reference: chr 16
allele count: 3
allele frequency: 2.672034487058446e-5
allele num: 112274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.26G>A
  hgvsp: ENSP00000394197.2:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.26G>A
  hgvsp: ENSP00000455461.2:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.26G>A
  hgvsp: ENSP00000457034.1:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.26G>A
  hgvsp: ENSP00000393610.2:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.26G>A
  hgvsp: ENSP00000219345.5:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.26G>A
  hgvsp: ENSP00000454557.1:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.26G>A
  hgvsp: ENSP00000454227.1:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.73G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.26G>A
  hgvsp: ENSP00000457049.1:p.Arg9His
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg9His
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

16-68279360-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279360
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279360
    reference: chr 16
allele count: 1
allele frequency: 8.954635814961405e-6
allele num: 111674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.78G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.31G>T
  hgvsp: ENSP00000393610.2:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.31G>T
  hgvsp: ENSP00000219345.5:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.31G>T
  hgvsp: ENSP00000454557.1:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.31G>T
  hgvsp: ENSP00000394197.2:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.31G>T
  hgvsp: ENSP00000457049.1:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.31G>T
  hgvsp: ENSP00000454227.1:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.31G>T
  hgvsp: ENSP00000455461.2:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.31G>T
  hgvsp: ENSP00000457034.1:p.Gly11Trp
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly11Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-68279363-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279363
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279363
    reference: chr 16
allele count: 1
allele frequency: 9.014206389269489e-6
allele num: 110936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.34C>A
  hgvsp: ENSP00000457034.1:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.34C>A
  hgvsp: ENSP00000457049.1:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.34C>A
  hgvsp: ENSP00000454227.1:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.34C>A
  hgvsp: ENSP00000219345.5:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.34C>A
  hgvsp: ENSP00000455461.2:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.81C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.34C>A
  hgvsp: ENSP00000394197.2:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.34C>A
  hgvsp: ENSP00000454557.1:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.34C>A
  hgvsp: ENSP00000393610.2:p.Leu12Met
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu12Met
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

16-68279371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279371
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279371
    reference: chr 16
allele count: 20
allele frequency: 1.844576024200837e-4
allele num: 108426
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.42G>A
  hgvsp: ENST00000219345.5:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.42G>A
  hgvsp: ENST00000566188.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.42G>A
  hgvsp: ENST00000444212.2:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.42G>A
  hgvsp: ENST00000565744.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.42G>A
  hgvsp: ENST00000564827.2:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.89G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.42G>A
  hgvsp: ENST00000413021.2:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.42G>A
  hgvsp: ENST00000568082.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.42G>A
  hgvsp: ENST00000566978.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16481
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23404
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35270
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro14Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum

16-68279383-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279383
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279383
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 103110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.54G>C
  hgvsp: ENST00000566188.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.101G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.54G>C
  hgvsp: ENST00000444212.2:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.54G>C
  hgvsp: ENST00000566978.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.54G>C
  hgvsp: ENST00000568082.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.54G>C
  hgvsp: ENST00000565744.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.54G>C
  hgvsp: ENST00000219345.5:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.54G>C
  hgvsp: ENST00000564827.2:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.54G>C
  hgvsp: ENST00000413021.2:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20742
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu18Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-68279383-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279383
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279383
    reference: chr 16
allele count: 2
allele frequency: 1.939676074095626e-5
allele num: 103110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.54G>T
  hgvsp: ENST00000568082.1:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.54G>T
  hgvsp: ENST00000564827.2:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.54G>T
  hgvsp: ENST00000219345.5:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.54G>T
  hgvsp: ENST00000565744.1:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.54G>T
  hgvsp: ENST00000566188.1:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.54G>T
  hgvsp: ENST00000413021.2:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.54G>T
  hgvsp: ENST00000444212.2:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.54G>T
  hgvsp: ENST00000566978.1:c.54G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.101G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20742
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu18Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-68279384-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279384
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279384
    reference: chr 16
allele count: 3
allele frequency: 2.936915064416337e-5
allele num: 102148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.55T>A
  hgvsp: ENSP00000393610.2:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.55T>A
  hgvsp: ENSP00000457034.1:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.55T>A
  hgvsp: ENSP00000457049.1:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.55T>A
  hgvsp: ENSP00000219345.5:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.55T>A
  hgvsp: ENSP00000454227.1:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.55T>A
  hgvsp: ENSP00000454557.1:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.55T>A
  hgvsp: ENSP00000455461.2:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.55T>A
  hgvsp: ENSP00000394197.2:p.Phe19Ile
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.102T>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Phe19Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

16-68279396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279396
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279396
    reference: chr 16
allele count: 1
allele frequency: 1.105729892301908e-5
allele num: 90438
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.67C>T
  hgvsp: ENST00000219345.5:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.67C>T
  hgvsp: ENST00000568082.1:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.67C>T
  hgvsp: ENST00000413021.2:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.67C>T
  hgvsp: ENST00000566978.1:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.67C>T
  hgvsp: ENST00000444212.2:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.67C>T
  hgvsp: ENST00000566188.1:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.67C>T
  hgvsp: ENST00000564827.2:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.67C>T
  hgvsp: ENST00000565744.1:c.67C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.114C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu23Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

16-68279398-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279398
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279398
    reference: chr 16
allele count: 1
allele frequency: 1.1079350306898e-5
allele num: 90258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.116G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.69G>C
  hgvsp: ENST00000219345.5:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.69G>C
  hgvsp: ENST00000444212.2:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.69G>C
  hgvsp: ENST00000413021.2:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.69G>C
  hgvsp: ENST00000566188.1:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.69G>C
  hgvsp: ENST00000568082.1:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.69G>C
  hgvsp: ENST00000565744.1:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.69G>C
  hgvsp: ENST00000566978.1:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.69G>C
  hgvsp: ENST00000564827.2:c.69G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14193
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23156
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu23Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

16-68279399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279399
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279399
    reference: chr 16
allele count: 11
allele frequency: 1.219160774056259e-4
allele num: 90226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.70C>T
  hgvsp: ENST00000568082.1:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.70C>T
  hgvsp: ENST00000565744.1:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.70C>T
  hgvsp: ENST00000413021.2:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.70C>T
  hgvsp: ENST00000219345.5:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.117C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.70C>T
  hgvsp: ENST00000566188.1:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.70C>T
  hgvsp: ENST00000444212.2:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.70C>T
  hgvsp: ENST00000564827.2:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.70C>T
  hgvsp: ENST00000566978.1:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13359
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10185
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14192
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13687
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu24Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

16-68279405-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279405
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279405
    reference: chr 16
allele count: 1
allele frequency: 1.188693150750065e-5
allele num: 84126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.123C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.76C>T
  hgvsp: ENST00000564827.2:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.76C>T
  hgvsp: ENST00000444212.2:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.76C>T
  hgvsp: ENST00000565744.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.76C>T
  hgvsp: ENST00000566978.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.76C>T
  hgvsp: ENST00000219345.5:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.76C>T
  hgvsp: ENST00000413021.2:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.76C>T
  hgvsp: ENST00000568082.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.76C>T
  hgvsp: ENST00000566188.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu26Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

16-68279410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279410
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279410
    reference: chr 16
allele count: 9
allele frequency: 1.141176172241524e-4
allele num: 78866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.81C>T
  hgvsp: ENST00000564827.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.81C>T
  hgvsp: ENST00000566188.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.81C>T
  hgvsp: ENST00000219345.5:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.81C>T
  hgvsp: ENST00000568082.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.128C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.81C>T
  hgvsp: ENST00000565744.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.81C>T
  hgvsp: ENST00000444212.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.81C>T
  hgvsp: ENST00000413021.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.81C>T
  hgvsp: ENST00000566978.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16390
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu27Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/16-68279412-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279412
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279412
    reference: chr 16
allele count: 1
allele frequency: 1.329610424145725e-5
allele num: 75210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.83C>A
  hgvsp: ENSP00000455461.2:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.130C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.83C>A
  hgvsp: ENSP00000219345.5:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.83C>A
  hgvsp: ENSP00000454227.1:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.83C>A
  hgvsp: ENSP00000393610.2:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.83C>A
  hgvsp: ENSP00000454557.1:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.83C>A
  hgvsp: ENSP00000394197.2:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.83C>A
  hgvsp: ENSP00000457034.1:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.83C>A
  hgvsp: ENSP00000457049.1:p.Ala28Glu
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16687
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala28Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-68279413-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279413
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279413
    reference: chr 16
allele count: 1
allele frequency: 1.336041043180846e-5
allele num: 74848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.131G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.84G>A
  hgvsp: ENST00000565744.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.84G>A
  hgvsp: ENST00000566188.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.84G>A
  hgvsp: ENST00000566978.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.84G>A
  hgvsp: ENST00000444212.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.84G>A
  hgvsp: ENST00000219345.5:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.84G>A
  hgvsp: ENST00000568082.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.84G>A
  hgvsp: ENST00000564827.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.84G>A
  hgvsp: ENST00000413021.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2635
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala28Ala
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

16-68279421-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279421
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279421
    reference: chr 16
allele count: 36
allele frequency: 5.537268895930107e-4
allele num: 65014
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.92C>T
  hgvsp: ENSP00000219345.5:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.92C>T
  hgvsp: ENSP00000455461.2:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.92C>T
  hgvsp: ENSP00000394197.2:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.92C>T
  hgvsp: ENSP00000454557.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.92C>T
  hgvsp: ENSP00000454227.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.92C>T
  hgvsp: ENSP00000457034.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.92C>T
  hgvsp: ENSP00000457049.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.139C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.92C>T
  hgvsp: ENSP00000393610.2:p.Ala31Val
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22400
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16923
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4809
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8498
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 1
hgvs: p.Ala31Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

16-68279432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279432
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279432
    reference: chr 16
allele count: 1
allele frequency: 1.805119318386946e-5
allele num: 55398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.150G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.103G>A
  hgvsp: ENSP00000455461.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.103G>A
  hgvsp: ENSP00000457049.1:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.103G>A
  hgvsp: ENSP00000394197.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.103G>A
  hgvsp: ENSP00000393610.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.103G>A
  hgvsp: ENSP00000454557.1:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.103G>A
  hgvsp: ENSP00000457034.1:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.103G>A
  hgvsp: ENSP00000219345.5:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.103G>A
  hgvsp: ENSP00000454227.1:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6560
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly35Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-68279441-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279441
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279441
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 49710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.112C>A
  hgvsp: ENSP00000393610.2:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.112C>A
  hgvsp: ENSP00000457034.1:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.112C>A
  hgvsp: ENSP00000454557.1:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.112C>A
  hgvsp: ENSP00000454227.1:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.112C>A
  hgvsp: ENSP00000457049.1:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.159C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.112C>A
  hgvsp: ENSP00000219345.5:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.112C>A
  hgvsp: ENSP00000455461.2:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.112C>A
  hgvsp: ENSP00000394197.2:p.Pro38Thr
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8095
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26369
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro38Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-68279444-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279444
    reference: chr 16
allele count: 1
allele frequency: 2.058375530031699e-5
allele num: 48582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.115C>A
  hgvsp: ENSP00000454227.1:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.115C>A
  hgvsp: ENSP00000393610.2:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.115C>A
  hgvsp: ENSP00000454557.1:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.115C>A
  hgvsp: ENSP00000457034.1:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.115C>A
  hgvsp: ENSP00000457049.1:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.162C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.115C>A
  hgvsp: ENSP00000219345.5:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.115C>A
  hgvsp: ENSP00000455461.2:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.115C>A
  hgvsp: ENSP00000394197.2:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13720
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26471
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro39Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

16-68279444-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279444
    reference: chr 16
allele count: 1
allele frequency: 2.058375530031699e-5
allele num: 48582
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.115C>G
  hgvsp: ENSP00000454557.1:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.115C>G
  hgvsp: ENSP00000455461.2:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.115C>G
  hgvsp: ENSP00000219345.5:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.115C>G
  hgvsp: ENSP00000393610.2:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.115C>G
  hgvsp: ENSP00000457034.1:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.115C>G
  hgvsp: ENSP00000394197.2:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.162C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.115C>G
  hgvsp: ENSP00000454227.1:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.115C>G
  hgvsp: ENSP00000457049.1:p.Pro39Ala
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro39Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

16-68279444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279444
    reference: chr 16
allele count: 1
allele frequency: 2.058375530031699e-5
allele num: 48582
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.115C>T
  hgvsp: ENSP00000219345.5:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.115C>T
  hgvsp: ENSP00000457034.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.115C>T
  hgvsp: ENSP00000393610.2:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.162C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.115C>T
  hgvsp: ENSP00000455461.2:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.115C>T
  hgvsp: ENSP00000394197.2:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.115C>T
  hgvsp: ENSP00000457049.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.115C>T
  hgvsp: ENSP00000454227.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.115C>T
  hgvsp: ENSP00000454557.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6383
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro39Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-68279445-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279445
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279445
    reference: chr 16
allele count: 1
allele frequency: 2.084810073802277e-5
allele num: 47966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.116C>A
  hgvsp: ENSP00000454227.1:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.163C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.116C>A
  hgvsp: ENSP00000457049.1:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.116C>A
  hgvsp: ENSP00000457034.1:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.116C>A
  hgvsp: ENSP00000393610.2:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.116C>A
  hgvsp: ENSP00000454557.1:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.116C>A
  hgvsp: ENSP00000219345.5:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.116C>A
  hgvsp: ENSP00000394197.2:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.116C>A
  hgvsp: ENSP00000455461.2:p.Pro39Gln
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro39Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-68279465-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279465
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279465
    reference: chr 16
allele count: 1
allele frequency: 2.708705780378135e-5
allele num: 36918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.174+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.127+9C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24957
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27095
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-68279465-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279465
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279464
    reference: chr 16
allele count: 1
allele frequency: 2.708705780378135e-5
allele num: 36918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.174+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.127+12delG
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: CG
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

16-68279468-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279468
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279468
    reference: chr 16
allele count: 1
allele frequency: 2.827254735651682e-5
allele num: 35370
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.174+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.127+12G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16878
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26031
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

16-68279484-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279484
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279484
    reference: chr 16
allele count: 2
allele frequency: 6.772314777190844e-5
allele num: 29532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.174+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.127+28G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21059
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3509
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

16-68279496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279496
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279496
    reference: chr 16
allele count: 3
allele frequency: 1.266998901934285e-4
allele num: 23678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.174+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24859
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20326
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5502
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-68279510-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68279510
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68279510
    reference: chr 16
allele count: 1
allele frequency: 4.973639709539441e-5
allele num: 20106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.174+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.127+54C>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22805
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7055
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

16-68282424-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68282424
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68282424
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 12
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-769G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+2968G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-769G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.235G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-769G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-769G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+2968G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-769G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-769G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.128-48G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

16-68282522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68282522
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68282522
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 54
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-671G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-671G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-671G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-671G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-671G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-671G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.333G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3066G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.178G>A
  hgvsp: ENSP00000457049.1:p.Ala60Thr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3066G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala60Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-68282528-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68282528
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68282528
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 54
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-665G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-665G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-665G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.339G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.184G>T
  hgvsp: ENSP00000457049.1:p.Asp62Tyr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-665G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3072G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3072G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-665G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-665G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Asp62Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

16-68282602-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68282602
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68282602
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 6
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.251+7A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-591A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-591A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.406+7A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3146A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-591A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-591A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-591A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-591A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3146A>G
  variant of: http://identifiers.org/hgnc/17163
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
hgvs: c.251+7A>G
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

16-68283153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283153
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283153
    reference: chr 16
allele count: 1
allele frequency: 8.958486374142224e-6
allele num: 111626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3697G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3697G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-40G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-40G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

16-68283156-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283156
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283156
    reference: chr 16
allele count: 1
allele frequency: 8.918538073239034e-6
allele num: 112126
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3700G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3700G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-37G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11368
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-68283159-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283159
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283159
    reference: chr 16
allele count: 9
allele frequency: 7.971797551772397e-5
allele num: 112898
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3703C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-34C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3703C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-34C>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28455
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-68283165-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283165
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283165
    reference: chr 16
allele count: 6
allele frequency: 5.235784844148138e-5
allele num: 114596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3709G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-28G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3709G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32780
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1875
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

16-68283169-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283169
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283169
    reference: chr 16
allele count: 1
allele frequency: 8.651566798747254e-6
allele num: 115586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3713A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-24A>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3713A>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34136
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-68283172-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283172
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283172
    reference: chr 16
allele count: 2
allele frequency: 1.72188167229148e-5
allele num: 116152
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3716C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3716C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-21C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-21C>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

16-68283175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283175
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283175
    reference: chr 16
allele count: 1
allele frequency: 8.568246080027418e-6
allele num: 116710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3719G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3719G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-18G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-18G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

16-68283177-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283177
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283177
    reference: chr 16
allele count: 3
allele frequency: 2.563751965543173e-5
allele num: 117016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3721C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-16C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3721C>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35261
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7177
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

16-68283181-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283181
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283181
    reference: chr 16
allele count: 1
allele frequency: 8.494588946840863e-6
allele num: 117722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3725T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-12T>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3725T>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-68283183-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283183
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283183
    reference: chr 16
allele count: 2
allele frequency: 1.69485780143046e-5
allele num: 118004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3727C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3727C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-10C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-10C>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35025
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1989
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

16-68283184-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283184
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283184
    reference: chr 16
allele count: 1
allele frequency: 8.451513666097598e-6
allele num: 118322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.175-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.128-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.128-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3728C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.128-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.128-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3728C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.252-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.407-9C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.128-9C>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-68283198-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283198
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283198
    reference: chr 16
allele count: 9
allele frequency: 7.503001200480192e-5
allele num: 119952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.133G>C
  hgvsp: ENSP00000457034.1:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.133G>C
  hgvsp: ENSP00000454227.1:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.133G>C
  hgvsp: ENSP00000455461.2:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.257G>C
  hgvsp: ENSP00000457049.1:p.Trp86Ser
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3742G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.133G>C
  hgvsp: ENSP00000454557.1:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.412G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.133G>C
  hgvsp: ENSP00000219345.5:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.180G>C
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3742G>C
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13839
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly45Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

16-68283225-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283225
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283225
    reference: chr 16
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.207A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*23A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.160A>G
  hgvsp: ENSP00000454227.1:p.Lys54Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.160A>G
  hgvsp: ENSP00000219345.5:p.Lys54Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3769A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.160A>G
  hgvsp: ENSP00000454557.1:p.Lys54Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.439A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.160A>G
  hgvsp: ENSP00000455461.2:p.Lys54Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3769A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.160A>G
  hgvsp: ENSP00000457034.1:p.Lys54Glu
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys54Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

16-68283226-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283226
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283226
    reference: chr 16
allele count: 19
allele frequency: 1.571234825179451e-4
allele num: 120924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.440A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3770A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.161A>G
  hgvsp: ENSP00000454557.1:p.Lys54Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.161A>G
  hgvsp: ENSP00000454227.1:p.Lys54Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.161A>G
  hgvsp: ENSP00000457034.1:p.Lys54Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3770A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.161A>G
  hgvsp: ENSP00000455461.2:p.Lys54Arg
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.208A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*24A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.161A>G
  hgvsp: ENSP00000219345.5:p.Lys54Arg
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34730
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15080
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys54Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

16-68283228-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283228
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283228
    reference: chr 16
allele count: 1
allele frequency: 8.269383434771103e-6
allele num: 120928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.210C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*26C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.163C>G
  hgvsp: ENSP00000454227.1:p.Leu55Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.442C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.163C>G
  hgvsp: ENSP00000454557.1:p.Leu55Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3772C>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.163C>G
  hgvsp: ENSP00000457034.1:p.Leu55Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.163C>G
  hgvsp: ENSP00000455461.2:p.Leu55Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.163C>G
  hgvsp: ENSP00000219345.5:p.Leu55Val
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3772C>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu55Val
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-68283228-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283228
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283228
    reference: chr 16
allele count: 7
allele frequency: 5.788568404339772e-5
allele num: 120928
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.163C>T
  hgvsp: ENST00000219345.5:c.163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.163C>T
  hgvsp: ENST00000566188.1:c.163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3772C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3772C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.163C>T
  hgvsp: ENST00000565744.1:c.163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.163C>T
  hgvsp: ENST00000564827.2:c.163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.163C>T
  hgvsp: ENST00000568082.1:c.163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.442C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.210C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu55Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/16-68283233-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283233
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283233
    reference: chr 16
allele count: 2
allele frequency: 1.657385308936622e-5
allele num: 120672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*31C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.168C>A
  hgvsp: ENSP00000219345.5:p.Asp56Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3777C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.215C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.168C>A
  hgvsp: ENSP00000457034.1:p.Asp56Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.168C>A
  hgvsp: ENSP00000455461.2:p.Asp56Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3777C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.168C>A
  hgvsp: ENSP00000454557.1:p.Asp56Glu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.447C>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.168C>A
  hgvsp: ENSP00000454227.1:p.Asp56Glu
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp56Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

16-68283238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283238
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283238
    reference: chr 16
allele count: 2
allele frequency: 1.650900566258894e-5
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3782C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.173C>T
  hgvsp: ENSP00000219345.5:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.173C>T
  hgvsp: ENSP00000455461.2:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3782C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.452C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.173C>T
  hgvsp: ENSP00000454557.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.173C>T
  hgvsp: ENSP00000457034.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.173C>T
  hgvsp: ENSP00000454227.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.220C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*36C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro58Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

16-68283239-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283239
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283239
    reference: chr 16
allele count: 5
allele frequency: 4.126502046745016e-5
allele num: 121168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.174G>A
  hgvsp: ENST00000565744.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.221G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*37G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.174G>A
  hgvsp: ENST00000566188.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3783G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.174G>A
  hgvsp: ENST00000564827.2:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.174G>A
  hgvsp: ENST00000568082.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.174G>A
  hgvsp: ENST00000219345.5:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3783G>A
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.453G>A
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15387
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3305
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro58Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-68283248-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283248
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283248
    reference: chr 16
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.183G>T
  hgvsp: ENST00000564827.2:c.183G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3792G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.183G>T
  hgvsp: ENST00000568082.1:c.183G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.183G>T
  hgvsp: ENST00000566188.1:c.183G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3792G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*46G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.183G>T
  hgvsp: ENST00000565744.1:c.183G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.183G>T
  hgvsp: ENST00000219345.5:c.183G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.462G>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.230G>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val61Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

16-68283249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283249
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283249
    reference: chr 16
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.184C>T
  hgvsp: ENSP00000454227.1:p.His62Tyr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000455461
  ensembl transcript: ENST00000564827
  gene symbol: PLA2G15
  hgvsc: ENST00000564827.2:c.184C>T
  hgvsp: ENSP00000455461.2:p.His62Tyr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454557
  ensembl transcript: ENST00000568082
  gene symbol: PLA2G15
  hgvsc: ENST00000568082.1:c.184C>T
  hgvsp: ENSP00000454557.1:p.His62Tyr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457049
  ensembl transcript: ENST00000566978
  gene symbol: PLA2G15
  hgvsc: ENST00000566978.1:c.*47C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000219345
  ensembl transcript: ENST00000219345
  gene symbol: PLA2G15
  hgvsc: ENST00000219345.5:c.184C>T
  hgvsp: ENSP00000219345.5:p.His62Tyr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3793C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000562966
  gene symbol: PLA2G15
  hgvsc: ENST00000562966.1:n.231C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.184C>T
  hgvsp: ENSP00000457034.1:p.His62Tyr
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3793C>T
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.463C>T
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15433
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His62Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-68283253-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68283253
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 68283253
    reference: chr 16
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000393610
  ensembl transcript: ENST00000444212
  gene symbol: PLA2G15
  hgvsc: ENST00000444212.2:c.127+3797A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000454227
  ensembl transcript: ENST00000565744
  gene symbol: PLA2G15
  hgvsc: ENST00000565744.1:c.188A>G
  hgvsp: ENSP00000454227.1:p.Tyr63Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000394197
  ensembl transcript: ENST00000413021
  gene symbol: PLA2G15
  hgvsc: ENST00000413021.2:c.127+3797A>G
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103066
  ensembl protein: ENSP00000457034
  ensembl transcript: ENST00000566188
  gene symbol: PLA2G15
  hgvsc: ENST00000566188.1:c.188A>G
  hgvsp: ENSP00000457034.1:p.Tyr63Cys
  variant of: http://identifiers.org/hgnc/17163
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103066
  ensembl transcript: ENST00000568599
  gene symbol: PLA2G15
  hgvsc: ENST00000568599.1:n.467A>G
  variant of: http://identifiers.org/hgnc/17163
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
hgvs: p.Tyr63Cys
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 878
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.122658006495129e-4
allele num: 16012
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.491125e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

FS
type: SiteQuality
SIO_000300: 9.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.043e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 811
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.267386964925066e-4
allele num: 63122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.201923076923077e-3
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.561253561253561e-4
allele num: 11232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16038
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

FS
type: SiteQuality
SIO_000300: 2.895e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 1.497509e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 543
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 481
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.903133903133904e-5
allele num: 11232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584836286411614e-5
allele num: 63098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 56
allele frequency: 3.492142678972312e-3
allele num: 16036
num of homozygotes: 2

FS
type: SiteQuality
SIO_000300: 4.848e0

DP
type: SiteQuality
SIO_000300: 1.500063e6

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.289e1

VQSLOD
type: SiteQuality
SIO_000300: 9.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

GenotypeQuality
all individuals: 980
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3323
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37905
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8128
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.233636703652911e-5
allele num: 16042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-1

DP
type: SiteQuality
SIO_000300: 1.503409e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.344e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

GenotypeQuality
all individuals: 553
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 226
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8086
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585288522511097e-5
allele num: 63080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.987e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

DP
type: SiteQuality
SIO_000300: 1.504735e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

FS
type: SiteQuality
SIO_000300: 2.0767e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

QD
type: SiteQuality
SIO_000300: 7.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

GenotypeQuality
all individuals: 3292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37437
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2266500622665e-5
allele num: 16060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.29e0

MQRankSum
type: SiteQuality
SIO_000300: 8.29e-1

FS
type: SiteQuality
SIO_000300: 2.0767e1

VQSLOD
type: SiteQuality
SIO_000300: -3.987e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

DP
type: SiteQuality
SIO_000300: 1.504735e6

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8094
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38223
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584133320660267e-5
allele num: 63126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

DP
type: SiteQuality
SIO_000300: 1.506796e6

VQSLOD
type: SiteQuality
SIO_000300: -2.139e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.93e-1

FS
type: SiteQuality
SIO_000300: 9.087e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
all individuals: 3384
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 38487
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16060
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.796163069544365e-4
allele num: 8340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.508148e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.213e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58363158394831e-5
allele num: 63146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

DP
type: SiteQuality
SIO_000300: 1.5095e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.096e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.577e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 2.611e0

QD
type: SiteQuality
SIO_000300: 3.31e0

VQSLOD
type: SiteQuality
SIO_000300: -3.123e0

GenotypeQuality
all individuals: 1752
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38200
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.232082762059081e-5
allele num: 16046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 1.511762e6

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.272e0

FS
type: SiteQuality
SIO_000300: 5.884e0

GenotypeQuality
all individuals: 620
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 873
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38200
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58533878689876e-5
allele num: 63078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16046
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 5.884e0

DP
type: SiteQuality
SIO_000300: 1.511762e6

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.272e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.0e1

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

GenotypeQuality
all individuals: 8058
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3437
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 9.75e1
variant carriers: 14

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.375597858794463e-4
allele num: 63142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11218
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

FS
type: SiteQuality
SIO_000300: 3.421e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

DP
type: SiteQuality
SIO_000300: 1.513701e6

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 8.32e0

GenotypeQuality
all individuals: 238
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8056
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2022
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11204
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.206554121151936e-5
allele num: 16112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

QD
type: SiteQuality
SIO_000300: 9.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.517453e6

GenotypeQuality
all individuals: 652
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3819
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.245174947080065e-4
allele num: 16062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63024
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.129e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

DP
type: SiteQuality
SIO_000300: 1.515425e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

QD
type: SiteQuality
SIO_000300: 1.406e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 4.697e0

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e-1

GenotypeQuality
all individuals: 39244
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 636
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1985
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7979
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.201345506967804e-4
allele num: 8324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63034
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.631e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

DP
type: SiteQuality
SIO_000300: 1.51618e6

QD
type: SiteQuality
SIO_000300: 7.37e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

GenotypeQuality
all individuals: 876
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 169
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4773
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.298022420959819e-5
allele num: 15878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.501321e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.095e0

VQSLOD
type: SiteQuality
SIO_000300: -9.631999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-2

QD
type: SiteQuality
SIO_000300: 2.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 573
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4806
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.601537475976938e-5
allele num: 62440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.501e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

FS
type: SiteQuality
SIO_000300: 9.09e-1

QD
type: SiteQuality
SIO_000300: 9.140000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.501904e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.259e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

GenotypeQuality
all individuals: 7428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 531
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5919
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37817
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615039245453664e-5
allele num: 61918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8198
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.27942681678608e-4
allele num: 15632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.481959e6

GenotypeQuality
all individuals: 1478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6515
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9254
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.130752373995617e-5
allele num: 10952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.46e-1

QD
type: SiteQuality
SIO_000300: 6.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

DP
type: SiteQuality
SIO_000300: 1.472282e6

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.743e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37425
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.470816617057073e-5
allele num: 15454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5286
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.583e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

QD
type: SiteQuality
SIO_000300: 7.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.316e0

DP
type: SiteQuality
SIO_000300: 1.458576e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.851e1

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 3.170365426330719e-4
allele num: 59930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.972386587771203e-4
allele num: 5070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.439e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.419174e6

FS
type: SiteQuality
SIO_000300: 6.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

GenotypeQuality
all individuals: 703
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 13850
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4678
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e-1

FS
type: SiteQuality
SIO_000300: 1.217e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.327174e6

QD
type: SiteQuality
SIO_000300: 1.317e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.953e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.87e-1

GenotypeQuality
all individuals: 846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13850
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 703
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.500665126374011e-5
allele num: 57132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7388
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.953e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

DP
type: SiteQuality
SIO_000300: 1.327174e6

QD
type: SiteQuality
SIO_000300: 1.317e1

FS
type: SiteQuality
SIO_000300: 1.217e0

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.87e-1

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1576
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 3.562945368171022e-4
allele num: 8420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14432
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

DP
type: SiteQuality
SIO_000300: 1.309143e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

FS
type: SiteQuality
SIO_000300: 7.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

QD
type: SiteQuality
SIO_000300: 1.308e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

GenotypeQuality
all individuals: 599
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22918
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3045
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13430
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.328374070138151e-4
allele num: 7528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3818
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.121479e6

FS
type: SiteQuality
SIO_000300: 2.891e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.525e0

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.759e0

VQSLOD
type: SiteQuality
SIO_000300: 7.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

QD
type: SiteQuality
SIO_000300: 8.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

GenotypeQuality
all individuals: 364
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21814
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 314
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.998161691244056e-5
allele num: 50046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3790
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.11875e6

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.562e0

QD
type: SiteQuality
SIO_000300: 1.116e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 401
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22317
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.999040460578922e-4
allele num: 50024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8672
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.331203407880724e-4
allele num: 7512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13376
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

FS
type: SiteQuality
SIO_000300: 2.066e0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.214e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 1.117149e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.397e1

GenotypeQuality
all individuals: 2601
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17567
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26722
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46546
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.76056338028169e-4
allele num: 5680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.011e1

VQSLOD
type: SiteQuality
SIO_000300: -1.099e0

DP
type: SiteQuality
SIO_000300: 1.025768e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

FS
type: SiteQuality
SIO_000300: 2.158e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.298e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

MQ
type: SiteQuality
SIO_000300: 5.747e1

GenotypeQuality
all individuals: 28883
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.599181345720462e-5
allele num: 43486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3124
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.322251605591235e-3
allele num: 5294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.868e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.365e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

DP
type: SiteQuality
SIO_000300: 9.58305e5

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29841
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.422128566584314e-5
allele num: 41286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

DP
type: SiteQuality
SIO_000300: 9.18521e5

QD
type: SiteQuality
SIO_000300: 1.123e1

GenotypeQuality
all individuals: 387
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12773
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.434630179675707e-5
allele num: 41074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

FS
type: SiteQuality
SIO_000300: 5.653e0

DP
type: SiteQuality
SIO_000300: 9.16082e5

VQSLOD
type: SiteQuality
SIO_000300: -7.625999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.66e-1

GenotypeQuality
all individuals: 483
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 72
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1278
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 31387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 390
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4180
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.11864406779661e-3
allele num: 472
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.039861351819757e-3
allele num: 5770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 8.190239493899683e-4
allele num: 35408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2294
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.222e1

DP
type: SiteQuality
SIO_000300: 8.2076e5

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.26e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

GenotypeQuality
all individuals: 2160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7361
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4700
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.110595187842972e-4
allele num: 4738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29870
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.305e0

VQSLOD
type: SiteQuality
SIO_000300: -1.045e0

QD
type: SiteQuality
SIO_000300: 6.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 7.54649e5

GenotypeQuality
all individuals: 32696
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8401
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6599
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.311e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.09e-2

QD
type: SiteQuality
SIO_000300: 9.33e0

DP
type: SiteQuality
SIO_000300: 7.13165e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32722
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6383
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1436
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.589375448671931e-4
allele num: 2786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.705e-1

DP
type: SiteQuality
SIO_000300: 6.99478e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.59e-2

QD
type: SiteQuality
SIO_000300: 1.018e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

FS
type: SiteQuality
SIO_000300: 8.755000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 637
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6383
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32722
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.872666718302223e-5
allele num: 25822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1428
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.59e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

DP
type: SiteQuality
SIO_000300: 6.99478e5

FS
type: SiteQuality
SIO_000300: 8.755000000000001e0

QD
type: SiteQuality
SIO_000300: 1.018e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.705e-1

GenotypeQuality
all individuals: 534
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32722
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.872666718302223e-5
allele num: 25822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.59e-2

FS
type: SiteQuality
SIO_000300: 8.755000000000001e0

QD
type: SiteQuality
SIO_000300: 1.018e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 6.99478e5

VQSLOD
type: SiteQuality
SIO_000300: -9.705e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32602
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9414
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1569
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2080
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3812
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.942334460131238e-5
allele num: 10058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.13e-2

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

DP
type: SiteQuality
SIO_000300: 6.95745e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.632e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 1057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4799
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.314625850340136e-5
allele num: 18816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.72e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 6.09951e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 9.43e0

GenotypeQuality
all individuals: 2855
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27095
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.314625850340136e-5
allele num: 18816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 9.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.09951e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2099
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2944
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 346
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.083658430862592e-4
allele num: 9228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.32e-2

QD
type: SiteQuality
SIO_000300: 7.55e0

DP
type: SiteQuality
SIO_000300: 5.96252e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.186e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.541e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22844
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 287
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19048
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.390433815350389e-4
allele num: 14384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.31427e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

FS
type: SiteQuality
SIO_000300: 8.744999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.329e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.26e-2

GenotypeQuality
all individuals: 3299
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 12835
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24764
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 279
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.78e-1

FS
type: SiteQuality
SIO_000300: 1.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.913e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 4.80389e5

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6903
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4807
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7000
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.241310824230387e-4
allele num: 8056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.098e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

QD
type: SiteQuality
SIO_000300: 8.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.61258e5

VQSLOD
type: SiteQuality
SIO_000300: -1.919e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.101e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 9.25e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.4498e4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 3.68e0

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.267e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.61e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.9869e4

QD
type: SiteQuality
SIO_000300: 1.091e1

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5247
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 344
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 652
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.34e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQ
type: SiteQuality
SIO_000300: 5.843e1

DP
type: SiteQuality
SIO_000300: 1.9438e4

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3662
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.699e1

VQSLOD
type: SiteQuality
SIO_000300: 9.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.108e-1

DP
type: SiteQuality
SIO_000300: 1.0012e4

GenotypeQuality
all individuals: 535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5434
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5790
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2939
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4689
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1848
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.832467887400929e-5
allele num: 14636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62112
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.592e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 1.213753e6

MQRankSum
type: SiteQuality
SIO_000300: -5.44e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

GenotypeQuality
all individuals: 177
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2850
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4929
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5208
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5285
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23335
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.432182607055272e-5
allele num: 10602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.258504e6

QD
type: SiteQuality
SIO_000300: 1.186e1

FS
type: SiteQuality
SIO_000300: 1.889e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.323e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

GenotypeQuality
all individuals: 1264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4884
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3441
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.433805958260316e-4
allele num: 62770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

FS
type: SiteQuality
SIO_000300: 1.507e0

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

DP
type: SiteQuality
SIO_000300: 1.293016e6

QD
type: SiteQuality
SIO_000300: 1.214e1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.749e0

GenotypeQuality
all individuals: 655
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4022
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2245
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1738
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30886
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.428328985826078e-5
allele num: 63638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.364e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 2.358e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 9.77e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.357744e6

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559235350983878e-5
allele num: 64134
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.52e-1

FS
type: SiteQuality
SIO_000300: 2.473e0

DP
type: SiteQuality
SIO_000300: 1.387714e6

QD
type: SiteQuality
SIO_000300: 1.292e1

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.444e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
all individuals: 2802
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33465
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6928
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1932
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.00924251557163e-4
allele num: 9954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.405795e6

FS
type: SiteQuality
SIO_000300: 7.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

QD
type: SiteQuality
SIO_000300: 7.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7073
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33940
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.423432682425488e-5
allele num: 15568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64658
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.906e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.353e0

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.358e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.418647e6

GenotypeQuality
all individuals: 2001
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33521
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15620
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.994011976047904e-4
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.42732e6

VQSLOD
type: SiteQuality
SIO_000300: 7.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

FS
type: SiteQuality
SIO_000300: 7.15e-1

QD
type: SiteQuality
SIO_000300: 1.389e1

GenotypeQuality
all individuals: 284
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7398
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65112
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.957362952346828e-5
allele num: 11164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.445575e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 8.85e0

VQSLOD
type: SiteQuality
SIO_000300: -1.483e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.444e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.249e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
all individuals: 2163
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1004
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7442
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65214
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.983339944466482e-4
allele num: 10084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.216e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.29e-1

FS
type: SiteQuality
SIO_000300: 5.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.526e0

DP
type: SiteQuality
SIO_000300: 1.460529e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2822
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34665
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530409231428484e-5
allele num: 65342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15966
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.367e0

DP
type: SiteQuality
SIO_000300: 1.46388e6

FS
type: SiteQuality
SIO_000300: 9.115e0

VQSLOD
type: SiteQuality
SIO_000300: -1.098e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.519e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.631e0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8270
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.361779391738538e-4
allele num: 66090
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.473e0

VQSLOD
type: SiteQuality
SIO_000300: 9.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

QD
type: SiteQuality
SIO_000300: 1.172e1

FS
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 1.508088e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 283
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2291
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3711
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.529519730804527e-4
allele num: 6538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.582e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

DP
type: SiteQuality
SIO_000300: 1.536834e6

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36694
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3296
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.405580947798894e-4
allele num: 66512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.591368227731864e-4
allele num: 6534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.339e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 1.955e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

DP
type: SiteQuality
SIO_000300: 1.537583e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36698
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8674
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1049
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3289
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503533303262667e-5
allele num: 66510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 6.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.539036e6

QD
type: SiteQuality
SIO_000300: 1.124e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.389e0

GenotypeQuality
all individuals: 979
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8674
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.052473312283867e-4
allele num: 66510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 6.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.389e0

QD
type: SiteQuality
SIO_000300: 1.124e1

DP
type: SiteQuality
SIO_000300: 1.539036e6

GenotypeQuality
all individuals: 2506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2259
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 308
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36410
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506614035616356e-5
allele num: 66374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.552312946289972e-4
allele num: 6442
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.532e2

DP
type: SiteQuality
SIO_000300: 1.551462e6

MQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.773e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.664e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.45e0

MQ
type: SiteQuality
SIO_000300: 5.822e1

FS
type: SiteQuality
SIO_000300: 1.79165e2

QD
type: SiteQuality
SIO_000300: 8.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8776
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1075
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002191599867904e-5
allele num: 66618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.325e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e0

FS
type: SiteQuality
SIO_000300: 2.571e0

DP
type: SiteQuality
SIO_000300: 1.553009e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.936e0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37066
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3782
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.523461304082876e-4
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.927525057825752e-4
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

FS
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.553595e6

QD
type: SiteQuality
SIO_000300: 1.281e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8793
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2448
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1076
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.022e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

MQ
type: SiteQuality
SIO_000300: 5.912e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.434e0

FS
type: SiteQuality
SIO_000300: 3.084e0

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 1.555166e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.131e0

GenotypeQuality
all individuals: 3314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8796
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3789
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.932e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

FS
type: SiteQuality
SIO_000300: 1.2035e1

DP
type: SiteQuality
SIO_000300: 1.55527e6

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.704e0

QD
type: SiteQuality
SIO_000300: 1.294e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.176e0