19-14640494-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640494
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640494
    reference: chr 19
allele count: 1
allele frequency: 8.455515532782033e-6
allele num: 118266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-545C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-585G>A
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-624C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-512C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.-15C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-37C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.26C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.85C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.53C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.73C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.53C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12298C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

19-14640507-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640507
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640507
    reference: chr 19
allele count: 1
allele frequency: 8.396446623788812e-6
allele num: 119098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-598G>A
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12311C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.66C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.55C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-532C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.86C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-24C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-611C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.-2C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-499C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.98C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.66C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39776
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

19-14640515-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640515
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640515
    reference: chr 19
allele count: 1
allele frequency: 8.381948635418762e-6
allele num: 119304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-606G>C
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.7C>G
  hgvsp: ENSP00000473129.1:p.His3Asp
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.7C>G
  hgvsp: ENSP00000472504.1:p.His3Asp
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.7C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-491C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-524C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.63C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.47C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.106C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.7C>G
  hgvsp: ENSP00000215567.4:p.His3Asp
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.94C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.74C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12319C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.74C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-603C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His3Asp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-14640521-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640521
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640521
    reference: chr 19
allele count: 1
allele frequency: 8.373806732540612e-6
allele num: 119420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.100G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.69G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.80G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.13G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.112G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.13G>C
  hgvsp: ENSP00000473129.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-518G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.13G>C
  hgvsp: ENSP00000215567.4:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-485G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12325G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.13G>C
  hgvsp: ENSP00000472504.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.80G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-597G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-612C>G
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.53G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu5Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-14640533-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640533
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640533
    reference: chr 19
allele count: 2
allele frequency: 1.674424835069154e-5
allele num: 119444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.92G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12337G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-624C>T
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+10G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+10G>A
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39585
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-14640533-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640533
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640533
    reference: chr 19
allele count: 2
allele frequency: 1.674424835069154e-5
allele num: 119444
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.92G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-624C>G
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12337G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+10G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-14640538-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640538
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640538
    reference: chr 19
allele count: 9
allele frequency: 7.535542642798533e-5
allele num: 119434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-629T>C
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.97A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+15A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12342A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+15A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39413
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

19-14640551-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640551
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640551
    reference: chr 19
allele count: 1
allele frequency: 8.376893177858196e-6
allele num: 119376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.110G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-642C>T
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+28G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12355G>A
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

19-14640552-GCCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640552
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640549
    reference: chr 19
allele count: 1
allele frequency: 8.378016085790886e-6
allele num: 119360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+31_114+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+31_71+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-646_-644delTGG
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+31_15+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.113_115delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12358_300+12360delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+31_102+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+31_15+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+31_-8+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+31_15+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+31_55+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+31_-483+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+31_-516+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+31_-595+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+31_15+33delCAC
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+31_82+33delCAC
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: GCCA
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-14640556-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640556
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640556
    reference: chr 19
allele count: 2
allele frequency: 1.675434775324197e-5
allele num: 119372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.115C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12360C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-647G>T
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+33C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+33C>A
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38039
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-14640557-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640557
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640557
    reference: chr 19
allele count: 3
allele frequency: 2.513362711750808e-5
allele num: 119362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-648A>G
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.116T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+34T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12361T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+34T>C
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

19-14640565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640565
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640565
    reference: chr 19
allele count: 1
allele frequency: 8.387713677005921e-6
allele num: 119222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-656G>A
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.124C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12369C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+42C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-14640566-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640566
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640566
    reference: chr 19
allele count: 2
allele frequency: 1.676980094246281e-5
allele num: 119262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-657T>C
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.125A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+43A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12370A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+43A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-14640570-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640570
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640570
    reference: chr 19
allele count: 1
allele frequency: 8.404773911581778e-6
allele num: 118980
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.129T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12374T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-661A>C
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+47T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+47T>G
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/19-14640575-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640575
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640575
    reference: chr 19
allele count: 1
allele frequency: 8.410711882653748e-6
allele num: 118896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12379C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.134C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-666G>T
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+52C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+52C>A
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-14640575-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14640575
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14640572
    reference: chr 19
allele count: 1
allele frequency: 8.410711882653748e-6
allele num: 118896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000599646
  gene symbol: TECR
  hgvsc: ENST00000599646.1:n.138_140delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132002
  ensembl protein: ENSP00000470460
  ensembl transcript: ENST00000594099
  gene symbol: DNAJB1
  hgvsc: ENST00000594099.1:c.-669_-667delAAG
  variant of: http://identifiers.org/hgnc/5270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+56_-516+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+56_82+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+56_71+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-595+56_-595+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+56_102+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+56_15+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+56_15+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+56_114+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.15+56_15+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+56_-483+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+56_55+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+56_15+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-8+56_-8+58delCTT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.300+12383_300+12385delCTT
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: CCTT
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

19-14655883-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14655883
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14655883
    reference: chr 19
allele count: 1
allele frequency: 8.110300081103001e-5
allele num: 12330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-451+8377C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-7-43C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.16-43C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+15360C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-17454C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+15360C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

http://identifiers.org/exac.variant/19-14655892-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14655892
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14655892
    reference: chr 19
allele count: 1
allele frequency: 8.105041335710812e-5
allele num: 12338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.16-34C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-7-34C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-17445C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-451+8386C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+15369C>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+15369C>A
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

19-14655916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14655916
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14655916
    reference: chr 19
allele count: 19
allele frequency: 1.538959987040337e-3
allele num: 12346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-451+8410C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.16-10C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.-7-10C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-17421C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+15393C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+15393C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

19-14656647-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14656647
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14656647
    reference: chr 19
allele count: 46
allele frequency: 7.419354838709677e-1
allele num: 62
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.15+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.-35T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.60+655T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.-35T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-451+9141T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.82+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-516+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.114+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.15+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-483+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.82+655T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.71+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-16690T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.15+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.102+16124T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.55+16124T>C
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 326
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 15
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

19-14673293-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673293
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673293
    reference: chr 19
allele count: 5
allele frequency: 4.142570713682082e-5
allele num: 120698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-44C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-44C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum

19-14673295-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673295
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673295
    reference: chr 19
allele count: 26
allele frequency: 2.153851251718939e-4
allele num: 120714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-42A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-42A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8267
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

19-14673297-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673297
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673297
    reference: chr 19
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-40G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-40G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

19-14673311-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673311
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673312
    reference: chr 19
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-25dupT
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-25dupT
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6980
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

19-14673313-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673313
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673313
    reference: chr 19
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-24A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-24A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

19-14673319-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673319
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673319
    reference: chr 19
allele count: 2
allele frequency: 1.650900566258894e-5
allele num: 121146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-18G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-18G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

19-14673320-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673320
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673320
    reference: chr 19
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-17C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-17C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-14673322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673322
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673322
    reference: chr 19
allele count: 671
allele frequency: 5.536760458783728e-3
allele num: 121190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-15G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-15G>A
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 5.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 7.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 1
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

19-14673326-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673326
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673326
    reference: chr 19
allele count: 2
allele frequency: 1.649947201689546e-5
allele num: 121216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-11T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-11T>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-14673330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673330
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673330
    reference: chr 19
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-7C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.16-7C>T
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

19-14673333-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673333
    reference: chr 19
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-4C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-4C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.16-4C>G
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum

19-14673333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673333
    reference: chr 19
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.115-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.61-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.301-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-450-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.20-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.16-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-515-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.20-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.83-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-482-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.16-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.103-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.71-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-450-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.16-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.72-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.56-4C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.83-4C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.16-4C>T
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

19-14673346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673346
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673346
    reference: chr 19
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-441C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.70C>T
  hgvsp: ENST00000436007.2:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.25C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-506C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.310C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.81C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.25C>T
  hgvsp: ENST00000598333.1:c.25C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.80C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.29C>T
  hgvsp: ENSP00000469263.1:p.Ser10Phe
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-441C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.92C>T
  hgvsp: ENSP00000472504.1:p.Ser31Phe
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.112C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.29C>T
  hgvsp: ENSP00000473033.1:p.Ser10Phe
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.65C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.124C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-473C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.25C>T
  hgvsp: ENST00000215567.5:c.25C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser10Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-14673351-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673351
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673351
    reference: chr 19
allele count: 37
allele frequency: 3.050540028031989e-4
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.75C>T
  hgvsp: ENST00000436007.2:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.315C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.34C>T
  hgvsp: ENSP00000473033.1:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.34C>T
  hgvsp: ENSP00000469263.1:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-468C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.85C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.30C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-501C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.30C>T
  hgvsp: ENST00000598333.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.97C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.70C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.30C>T
  hgvsp: ENST00000215567.5:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.129C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.117C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.97C>T
  hgvsp: ENSP00000472504.1:p.Arg33Cys
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-436C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-436C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.86C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Arg12Cys
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-14673352-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673352
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673352
    reference: chr 19
allele count: 4
allele frequency: 3.29777235477435e-5
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.31G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.118G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.31G>A
  hgvsp: ENSP00000215567.4:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.316G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-435G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-435G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.35G>A
  hgvsp: ENSP00000473033.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.87G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.98G>A
  hgvsp: ENSP00000472504.1:p.Arg33His
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.76G>A
  hgvsp: ENSP00000397206.2:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-500G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.35G>A
  hgvsp: ENSP00000469263.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.130G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.71G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.31G>A
  hgvsp: ENSP00000473129.1:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.98G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.86G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-467G>A
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala11Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

19-14673353-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673353
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673353
    reference: chr 19
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-434C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.88C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-499C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.36C>G
  hgvsp: ENST00000598918.1:c.36C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.99C>G
  hgvsp: ENST00000598987.1:c.99C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.36C>G
  hgvsp: ENST00000598715.1:c.36C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.77C>G
  hgvsp: ENSP00000397206.2:p.Ala26Gly
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.32C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.32C>G
  hgvsp: ENSP00000215567.4:p.Ala11Gly
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.87C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-466C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.32C>G
  hgvsp: ENSP00000473129.1:p.Ala11Gly
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.119C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-434C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.131C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.317C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.99C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.72C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala11Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-14673368-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673368
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673368
    reference: chr 19
allele count: 10
allele frequency: 8.24347940778844e-5
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.102A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-419A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-484A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.92A>G
  hgvsp: ENSP00000397206.2:p.Lys31Arg
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.114A>G
  hgvsp: ENST00000598987.1:c.114A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.332A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-451A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.87A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.134A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-419A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.114A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.47A>G
  hgvsp: ENSP00000215567.4:p.Lys16Arg
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.51A>G
  hgvsp: ENST00000598715.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.47A>G
  hgvsp: ENSP00000473129.1:p.Lys16Arg
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.51A>G
  hgvsp: ENST00000598918.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.47A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.103A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.146A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys16Arg
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

19-14673397-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673397
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673397
    reference: chr 19
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+10G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+10G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

19-14673400-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673400
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673400
    reference: chr 19
allele count: 2
allele frequency: 1.649076517150396e-5
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+13C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+13C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

19-14673406-CTGCACTGGGCCAAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673406
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673392
    reference: chr 19
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: CTGCACTGGGCCAAG
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-14673412-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673412
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673412
    reference: chr 19
allele count: 13
allele frequency: 1.072094212340629e-4
allele num: 121258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+25T>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+25T>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

19-14673415-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673415
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673415
    reference: chr 19
allele count: 6
allele frequency: 4.948290365678658e-5
allele num: 121254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+28G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+28G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6999
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

19-14673424-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673424
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673424
    reference: chr 19
allele count: 5
allele frequency: 4.124731892426992e-5
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+37A>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+37A>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

19-14673428-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673428
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673428
    reference: chr 19
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+41G>A
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+41G>A
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-14673432-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673432
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673432
    reference: chr 19
allele count: 3
allele frequency: 2.475982965237199e-5
allele num: 121164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+45C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-14673432-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673432
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673432
    reference: chr 19
allele count: 4
allele frequency: 3.301310620316266e-5
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+45C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+45C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-14673434-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673434
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673434
    reference: chr 19
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.66+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.121+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.70+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-432+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.133+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.66+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-465+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.153+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.106+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.351+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.70+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-400+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.66+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.122+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.133+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.111+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.165+47G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-400+47G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-14673904-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673904
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673904
    reference: chr 19
allele count: 6
allele frequency: 1.069938300224687e-4
allele num: 56078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-82C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-82C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-49C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-49C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-82C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-114C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-114C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18156
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

19-14673907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673907
    reference: chr 19
allele count: 5
allele frequency: 8.733624454148471e-5
allele num: 57250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-46C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-79C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-79C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-46C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-111C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-79C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-111C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24191
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18163
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-14673908-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673908
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673908
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 57330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-78C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-78C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-78C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-45C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-110C>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-110C>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24200
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

19-14673919-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673919
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673919
    reference: chr 19
allele count: 1
allele frequency: 1.627498209751969e-5
allele num: 61444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-67T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-67T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-34T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-67T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-34T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-99T>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-99T>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-14673922-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673922
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673922
    reference: chr 19
allele count: 1
allele frequency: 1.577486118122161e-5
allele num: 63392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-64A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-31A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-64A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-31A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-96A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-64A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24564
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

19-14673926-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673926
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673926
    reference: chr 19
allele count: 3
allele frequency: 4.46162998215348e-5
allele num: 67240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-60C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-60C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-60C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-27C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-92C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-27C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-92C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

19-14673927-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673927
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673927
    reference: chr 19
allele count: 1
allele frequency: 1.469205453690644e-5
allele num: 68064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-59A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-59A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-59A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-26A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-26A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-91A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-91A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

19-14673929-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673929
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673929
    reference: chr 19
allele count: 1
allele frequency: 1.437690493990454e-5
allele num: 69556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-24C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-57C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-57C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-24C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-57C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-89C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-89C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13768
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

19-14673942-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673942
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673942
    reference: chr 19
allele count: 1
allele frequency: 1.149610282114363e-5
allele num: 86986
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-44A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-44A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-11A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-44A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-11A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-76A>G
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-76A>G
  variant of: http://identifiers.org/hgnc/4551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16377
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-14673946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673946
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673946
    reference: chr 19
allele count: 11
allele frequency: 1.199746962458827e-4
allele num: 91686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-40C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-40C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-72C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-40C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-72C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-464-7C>T
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-14673947-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673947
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673947
    reference: chr 19
allele count: 2
allele frequency: 2.152945229073373e-5
allele num: 92896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-6C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-6C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-71C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-71C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-464-6C>T
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-14673952-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673952
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673952
    reference: chr 19
allele count: 1
allele frequency: 1.019742209169522e-5
allele num: 98064
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-464-1G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.166-1G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-34G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-34G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-66G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-34G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4689
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-464-1G>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

19-14673967-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673967
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673967
    reference: chr 19
allele count: 4
allele frequency: 3.590922148807814e-5
allele num: 111392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-450G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-19G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.180G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-19G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-19G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-51G>C
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-51G>C
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

19-14673974-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673974
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673974
    reference: chr 19
allele count: 4
allele frequency: 3.497665308406639e-5
allele num: 114362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-12G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-443G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.187G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-12G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-44G>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-12G>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

19-14673976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673976
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673976
    reference: chr 19
allele count: 1
allele frequency: 8.691117677733357e-6
allele num: 115060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-10C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-10C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-441C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.189C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-42C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-10C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10048
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

19-14673979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14673979
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14673979
    reference: chr 19
allele count: 1
allele frequency: 8.600522911793038e-6
allele num: 116272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596164
  gene symbol: TECR
  hgvsc: ENST00000596164.1:n.67-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000597607
  gene symbol: TECR
  hgvsc: ENST00000597607.1:n.107-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601652
  gene symbol: TECR
  hgvsc: ENST00000601652.1:n.192C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473033
  ensembl transcript: ENST00000598918
  gene symbol: TECR
  hgvsc: ENST00000598918.1:c.71-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000473129
  ensembl transcript: ENST00000598333
  gene symbol: TECR
  hgvsc: ENST00000598333.1:c.67-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000593637
  gene symbol: TECR
  hgvsc: ENST00000593637.1:n.154-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469343
  ensembl transcript: ENST00000594545
  gene symbol: TECR
  hgvsc: ENST00000594545.1:c.-399-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000601461
  gene symbol: TECR
  hgvsc: ENST00000601461.1:n.122-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000215567
  ensembl transcript: ENST00000215567
  gene symbol: TECR
  hgvsc: ENST00000215567.5:c.67-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000594807
  gene symbol: TECR
  hgvsc: ENST00000594807.1:n.134-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000469263
  ensembl transcript: ENST00000598715
  gene symbol: TECR
  hgvsc: ENST00000598715.1:c.71-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472697
  ensembl transcript: ENST00000596073
  gene symbol: TECR
  hgvsc: ENST00000596073.1:c.-431-7C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472114
  ensembl transcript: ENST00000600083
  gene symbol: TECR
  hgvsc: ENST00000600083.1:c.-438C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000471341
  ensembl transcript: ENST00000598298
  gene symbol: TECR
  hgvsc: ENST00000598298.1:c.-399-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000397206
  ensembl transcript: ENST00000436007
  gene symbol: TECR
  hgvsc: ENST00000436007.2:c.112-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000596953
  gene symbol: TECR
  hgvsc: ENST00000596953.1:n.123-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl protein: ENSP00000472504
  ensembl transcript: ENST00000598987
  gene symbol: TECR
  hgvsc: ENST00000598987.1:c.134-39C>T
  variant of: http://identifiers.org/hgnc/4551
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000099797
  ensembl transcript: ENST00000600076
  gene symbol: TECR
  hgvsc: ENST00000600076.1:n.352-39C>T
  variant of: http://identifiers.org/hgnc/4551
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
hgvs: n.67-7C>T
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2144
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545499505440158e-5
allele num: 64704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.633e0

VQSLOD
type: SiteQuality
SIO_000300: -6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.443775e6

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 3.458e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

GenotypeDepth
all individuals: 13037
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 983
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7366
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43373
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1451
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533789380042332e-5
allele num: 65198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

DP
type: SiteQuality
SIO_000300: 1.457715e6

GenotypeDepth
all individuals: 32
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 420
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39872
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4528
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13094
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 772
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7371
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.537042729787888e-4
allele num: 6506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65290
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.897e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.11e-1

FS
type: SiteQuality
SIO_000300: 3.219e0

DP
type: SiteQuality
SIO_000300: 1.460161e6

QD
type: SiteQuality
SIO_000300: 1.033e1

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e0

GenotypeDepth
all individuals: 327
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 43
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 850
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13105
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4528
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7370
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43531
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530175052025952e-5
allele num: 65352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.460716e6

FS
type: SiteQuality
SIO_000300: 2.784e0

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 2
allele frequency: 1.977848101265823e-4
allele num: 10112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65364
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

DP
type: SiteQuality
SIO_000300: 1.459187e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.323e1

BaseQRankSum
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SIO_000300: -1.425e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

VQSLOD
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SIO_000300: 3.08e0

ReadPosRankSum
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SIO_000300: 1.04e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.988e1

QD
type: SiteQuality
SIO_000300: 1.323e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.425e0

DP
type: SiteQuality
SIO_000300: 1.459187e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
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allele count: 9
allele frequency: 1.049685094471658e-3
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65356
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.912e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 1.457433e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.28e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.531065315246348e-5
allele num: 65314
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.11e1

FS
type: SiteQuality
SIO_000300: 1.674e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.13e-1

DP
type: SiteQuality
SIO_000300: 1.446909e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.531252871099133e-5
allele num: 65306
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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FS
type: SiteQuality
SIO_000300: 2.457e0

MQ
type: SiteQuality
SIO_000300: 5.633e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-1

ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

QD
type: SiteQuality
SIO_000300: 1.667e1

DP
type: SiteQuality
SIO_000300: 1.446987e6

BaseQRankSum
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SIO_000300: -4.84e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65300
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.738223535546671e-4
allele num: 11506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

DP
type: SiteQuality
SIO_000300: 1.443214e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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FS
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11494
num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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SIO_000300: -1.758e0

MQRankSum
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SIO_000300: -2.9e-1

ClippingRankSum
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SIO_000300: -5.1e-2

MQ
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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European (Finnish)
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Other
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South Asian
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DP
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MQRankSum
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65088
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Latino
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Other
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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South Asian
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DP
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QD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65020
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Other
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East Asian
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Latino
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African
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European (Finnish)
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FS
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MQRankSum
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DP
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SIO_000300: 1.44986e6

BaseQRankSum
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SIO_000300: 9.56e-1

MQ
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SIO_000300: 5.984e1

InbreedingCoeff
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SIO_000300: 2.7e-3

VQSLOD
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 2.01e-1

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
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SIO_000300: 2.11957e5

InbreedingCoeff
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ClippingRankSum
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MQ
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QD
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.313715186547556e-4
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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SIO_000300: 2.13361e5

VQSLOD
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QD
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SIO_000300: 1.333e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 5.5005500550055e-4
allele num: 3636
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Other
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Latino
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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European (Non-Finnish)
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allele frequency: 7.75e-1
allele num: 40
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Latino
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allele num: 0
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European (Finnish)
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allele frequency: 7.5e-1
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num of homozygotes: 2

East Asian
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FS
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MQ
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Other
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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FS
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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African
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European (Finnish)
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Latino
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DP
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ClippingRankSum
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FS
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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DP
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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ReadPosRankSum
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MQRankSum
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DP
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MQ
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QD
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FS
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VQSLOD
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European (Finnish)
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East Asian
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South Asian
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Latino
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African
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.634929794191191e-3
allele num: 10398
num of homozygotes: 0

South Asian
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allele frequency: 2.24106602059358e-3
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East Asian
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Latino
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allele frequency: 6.311602974234826e-3
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Other
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allele frequency: 9.911894273127754e-3
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European (Non-Finnish)
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allele count: 528
allele frequency: 7.928642220019821e-3
allele num: 66594
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European (Finnish)
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allele frequency: 1.06544901065449e-3
allele num: 6570
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ReadPosRankSum
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FS
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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SIO_000300: -3.694e0

QD
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SIO_000300: 1.234e1

MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
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Latino
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South Asian
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East Asian
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African
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allele num: 10398
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European (Non-Finnish)
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European (Finnish)
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allele count: 0
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

European (Finnish)
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allele count: 0
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East Asian
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ClippingRankSum
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SIO_000300: -4.45e-1

QD
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BaseQRankSum
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SIO_000300: -4.19e0

FS
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MQRankSum
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SIO_000300: -2.86e-1

ReadPosRankSum
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DP
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SIO_000300: 2.564216e6

InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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East Asian
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Other
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Latino
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European (Non-Finnish)
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DP
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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QD
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FS
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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FS
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VQSLOD
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DP
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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FS
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DP
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QD
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 9.29e-1

ClippingRankSum
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SIO_000300: 1.17e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 23

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 36

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Latino
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allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 2.059108527131783e-3
allele num: 16512
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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DP
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MQRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.953e1

QD
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SIO_000300: 1.081e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.00048007681229e-5
allele num: 66656
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 5.629999999999999e-1

QD
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FS
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SIO_000300: 1.831e0

MQRankSum
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ClippingRankSum
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DP
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SIO_000300: 2.565281e6

BaseQRankSum
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SIO_000300: 2.14e-1

VQSLOD
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SIO_000300: 2.02e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQ
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SIO_000300: 5.976e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.5001500150015e-5
allele num: 66660
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Other
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African
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InbreedingCoeff
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DP
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MQ
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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South Asian
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allele frequency: 5.451241671714113e-4
allele num: 16510
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Latino
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East Asian
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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MQRankSum
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ClippingRankSum
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MQ
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FS
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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African
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South Asian
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ClippingRankSum
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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DP
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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MQ
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ClippingRankSum
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QD
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VQSLOD
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MQRankSum
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FS
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DP
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ReadPosRankSum
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South Asian
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European (Non-Finnish)
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African
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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FS
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ReadPosRankSum
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VQSLOD
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East Asian
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European (Non-Finnish)
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DP
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East Asian
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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allele num: 66622
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East Asian
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South Asian
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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ClippingRankSum
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QD
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DP
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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European (Finnish)
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African
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allele num: 10382
num of homozygotes: 0

South Asian
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East Asian
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allele count: 1
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allele num: 8650
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FS
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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African
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Latino
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MQ
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MQRankSum
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VQSLOD
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DP
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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East Asian
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Latino
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MQRankSum
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 5.141916906622789e-4
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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DP
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VQSLOD
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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African
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Latino
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European (Non-Finnish)
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QD
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MQRankSum
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VQSLOD
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DP
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FS
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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Other
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.863852454321553e-5
allele num: 34918
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: -5.97e-1

InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.78e-1

DP
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SIO_000300: 7.25143e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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Latino
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European (Finnish)
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num of homozygotes: 0

East Asian
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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DP
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MQ
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 11246
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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Other
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South Asian
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MQRankSum
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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DP
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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Latino
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East Asian
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African
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VQSLOD
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MQRankSum
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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QD
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ReadPosRankSum
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DP
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FS
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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East Asian
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European (Non-Finnish)
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Latino
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South Asian
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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QD
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
all individuals: 427
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variant carriers: 0

GenotypeQuality
all individuals: 39734
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1196
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.397952655150352e-5
allele num: 15630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.868707195949236e-5
allele num: 61618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.635e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

FS
type: SiteQuality
SIO_000300: 1.1357e1

QD
type: SiteQuality
SIO_000300: 1.268e1

DP
type: SiteQuality
SIO_000300: 1.313093e6

GenotypeDepth
all individuals: 5
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40709
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 613
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1492
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3653
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3383
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 657
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9711
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 417
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3656
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.124561765312436e-4
allele num: 9698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

QD
type: SiteQuality
SIO_000300: 1.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 4.352e0

DP
type: SiteQuality
SIO_000300: 1.350159e6

GenotypeDepth
all individuals: 5
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 621
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 620
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3026
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3785
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40758
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02291325695581e-4
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15966
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

DP
type: SiteQuality
SIO_000300: 1.360252e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e0

FS
type: SiteQuality
SIO_000300: 7.03e0

VQSLOD
type: SiteQuality
SIO_000300: -2.121e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 2.555e1