17-34851181-CTTTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851181
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851177
    reference: chr 17
allele count: 2
allele frequency: 1.651418568550385e-5
allele num: 121108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1337_-90+1340delTTGT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467550
  ensembl transcript: ENST00000591067
  gene symbol: ZNHIT3
  hgvsc: ENST00000591067.1:c.68_71delTTGT
  hgvsp: ENSP00000467550.1:p.Phe23TrpfsTer?
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*273_*276delTTGT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3945_3948delTTGT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.407_410delTTGT
  hgvsp: ENSP00000225410.4:p.Phe136TrpfsTer8
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.211_214delTTGT
  hgvsp: ENSP00000467835.1:p.Phe71TrpfsTer8
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.68_71delTTGT
  hgvsp: ENSP00000465681.1:p.Phe23TrpfsTer8
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1337_286+1340delTTGT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1337_*126+1340delTTGT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2263_-89-2260delTTGT
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe136TrpfsTer8
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: CTTTG
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

17-34851190-T-TGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851190
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851193
    reference: chr 17
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: TGGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1342_-90+1344dupGAG
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2258_-89-2256dupGAG
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.216_218dupGAG
  hgvsp: ENSP00000467835.1:p.Glu73dup
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1342_286+1344dupGAG
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3950_3952dupGAG
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.73_75dupGAG
  hgvsp: ENSP00000465681.1:p.Glu25dup
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.412_414dupGAG
  hgvsp: ENSP00000225410.4:p.Glu138dup
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467550
  ensembl transcript: ENST00000591067
  gene symbol: ZNHIT3
  hgvsc: ENST00000591067.1:c.73_75dupGAG
  hgvsp: ENSP00000467550.1:p.Glu25dup
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*278_*280dupGAG
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1342_*126+1344dupGAG
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11791
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu138dup
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

17-34851208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851208
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851208
    reference: chr 17
allele count: 1
allele frequency: 8.321821480285606e-6
allele num: 120166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1358G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1358G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2242G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.89G>A
  hgvsp: ENSP00000465681.1:p.Cys30Tyr
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.428G>A
  hgvsp: ENSP00000225410.4:p.Cys143Tyr
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3966G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.232G>A
  hgvsp: ENSP00000467835.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*294G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1358G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys143Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

17-34851214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851214
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851214
    reference: chr 17
allele count: 1
allele frequency: 8.35812911637859e-6
allele num: 119644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3972G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1364G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.434G>A
  hgvsp: ENSP00000225410.4:p.Gly145Glu
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2236G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.95G>A
  hgvsp: ENSP00000465681.1:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1364G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*300G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.238G>A
  hgvsp: ENSP00000467835.1:p.Gly80Glu
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1364G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly145Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

17-34851219-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851219
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851219
    reference: chr 17
allele count: 1
allele frequency: 8.380403265005112e-6
allele num: 119326
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.439G>A
  hgvsp: ENSP00000225410.4:p.Val147Met
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1369G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.243G>A
  hgvsp: ENSP00000467835.1:p.Val82Met
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2231G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3977G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.100G>A
  hgvsp: ENSP00000465681.1:p.Val34Met
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*305G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1369G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1369G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val147Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

17-34851219-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851219
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851219
    reference: chr 17
allele count: 4
allele frequency: 3.352161306002045e-5
allele num: 119326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.100G>C
  hgvsp: ENSP00000465681.1:p.Val34Leu
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1369G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2231G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.439G>C
  hgvsp: ENSP00000225410.4:p.Val147Leu
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1369G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*305G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3977G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.243G>C
  hgvsp: ENSP00000467835.1:p.Val82Leu
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1369G>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11699
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40668
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val147Leu
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

17-34851227-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851227
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851227
    reference: chr 17
allele count: 1
allele frequency: 8.439530762089629e-6
allele num: 118490
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1377A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.108A>G
  hgvsp: ENST00000490126.2:c.108A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1377A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.251A>G
  hgvsp: ENST00000588357.1:c.251A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*313A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.447A>G
  hgvsp: ENST00000225410.4:c.447A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3985A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2223A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1377A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro149Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

17-34851237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851237
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851237
    reference: chr 17
allele count: 9
allele frequency: 7.684557454874571e-5
allele num: 117118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.118G>A
  hgvsp: ENSP00000465681.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1387G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3995G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.261G>A
  hgvsp: ENSP00000467835.1:p.Glu88Lys
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1387G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.457G>A
  hgvsp: ENSP00000225410.4:p.Glu153Lys
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2213G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*323G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1387G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11555
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu153Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

17-34851237-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851237
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851237
    reference: chr 17
allele count: 1
allele frequency: 8.538397172082857e-6
allele num: 117118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.118G>T
  hgvsp: ENSP00000465681.1:p.Glu40Ter
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.261G>T
  hgvsp: ENSP00000467835.1:p.Glu88Ter
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1387G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1387G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.457G>T
  hgvsp: ENSP00000225410.4:p.Glu153Ter
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.3995G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2213G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*323G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1387G>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu153Ter
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

17-34851243-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851243
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851243
    reference: chr 17
allele count: 1
allele frequency: 8.602150537634409e-6
allele num: 116250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.124T>A
  hgvsp: ENSP00000465681.1:p.Ser42Thr
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.463T>A
  hgvsp: ENSP00000225410.4:p.Ser155Thr
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1393T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4001T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1393T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1393T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*329T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.267T>A
  hgvsp: ENSP00000467835.1:p.Ser90Thr
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2207T>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4525
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser155Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

17-34851249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851249
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851249
    reference: chr 17
allele count: 1
allele frequency: 8.681912104321855e-6
allele num: 115182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*335G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1399G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*1G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*1G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4007G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2201G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1399G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1399G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

17-34851249-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851249
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851249
    reference: chr 17
allele count: 1
allele frequency: 8.681912104321855e-6
allele num: 115182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1399G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*335G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2201G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*1G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4007G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*1G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1399G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1399G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*1G>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

17-34851252-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851252
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851252
    reference: chr 17
allele count: 15
allele frequency: 1.31134929099715e-4
allele num: 114386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4010G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*338G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2198G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1402G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*4G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1402G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*4G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1402G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10872
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35377
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

17-34851253-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851253
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851253
    reference: chr 17
allele count: 1
allele frequency: 8.737439930100481e-6
allele num: 114450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*5G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*5G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1403G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1403G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4011G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*339G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2197G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1403G>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7585
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

17-34851258-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851258
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851258
    reference: chr 17
allele count: 288
allele frequency: 2.55718141781503e-3
allele num: 112624
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*10T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*10T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1408T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*10T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4016T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*344T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1408T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2192T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1408T>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10027
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 24110
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 6
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

17-34851263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851263
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851263
    reference: chr 17
allele count: 1
allele frequency: 8.958165367732689e-6
allele num: 111630
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*15C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*15C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1413C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4021C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*15C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1413C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1413C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2187C>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-34851268-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851268
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851268
    reference: chr 17
allele count: 1
allele frequency: 9.139097057210747e-6
allele num: 109420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1418T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*354T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2182T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4026T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1418T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*20T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*20T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1418T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*20T>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25107
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

17-34851274-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851274
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851274
    reference: chr 17
allele count: 3
allele frequency: 2.767272391845771e-5
allele num: 108410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2176A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*360A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1424A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4032A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1424A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1424A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*26A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*26A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*26A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13095
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4213
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

17-34851275-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851275
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851275
    reference: chr 17
allele count: 3
allele frequency: 2.786809103576405e-5
allele num: 107650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4033G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1425G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1425G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*27G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*27G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2175G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*27G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1425G>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*361G>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15398
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11064
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

17-34851276-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851276
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851276
    reference: chr 17
allele count: 5
allele frequency: 4.65662078342988e-5
allele num: 107374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*28C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2174C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4034C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1426C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1426C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*28C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*362C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1426C>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15356
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

17-34851277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851277
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851277
    reference: chr 17
allele count: 1
allele frequency: 9.342301943198805e-6
allele num: 107040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1427G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*29G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*29G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*363G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4035G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1427G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2173G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*29G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1427G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11206
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2846
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-34851278-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851278
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851278
    reference: chr 17
allele count: 10
allele frequency: 9.353486979946125e-5
allele num: 106912
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*30T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1428T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*364T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1428T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*30T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2172T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1428T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4036T>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14586
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13701
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4024
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11257
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

17-34851281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851281
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851281
    reference: chr 17
allele count: 1
allele frequency: 9.412296223786756e-6
allele num: 106244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4039G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*367G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1431G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*33G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2169G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*33G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1431G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*33G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1431G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10329
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11278
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

17-34851289-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851289
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851289
    reference: chr 17
allele count: 5
allele frequency: 4.84364707249971e-5
allele num: 103228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4047C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1439C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*41C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2161C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*375C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*41C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1439C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*41C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1439C>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14387
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7385
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4604
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

17-34851294-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34851294
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34851294
    reference: chr 17
allele count: 1
allele frequency: 9.814120556656918e-6
allele num: 101894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465681
  ensembl transcript: ENST00000490126
  gene symbol: ZNHIT3
  hgvsc: ENST00000490126.2:c.*46A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108278
  ensembl transcript: ENST00000590424
  gene symbol: ZNHIT3
  hgvsc: ENST00000590424.1:n.4052A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000225410
  ensembl transcript: ENST00000225410
  gene symbol: ZNHIT3
  hgvsc: ENST00000225410.4:c.*46A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-90+1444A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.286+1444A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467835
  ensembl transcript: ENST00000588357
  gene symbol: ZNHIT3
  hgvsc: ENST00000588357.1:c.*46A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467894
  ensembl transcript: ENST00000590827
  gene symbol: ZNHIT3
  hgvsc: ENST00000590827.1:c.*380A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*126+1444A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-2156A>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14063
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7672
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

17-34852055-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852055
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852055
    reference: chr 17
allele count: 6
allele frequency: 5.002584668745518e-5
allele num: 119938
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1395G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1395G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*40C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1395G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3770C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2175C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.814C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2308C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.760C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*40C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1395G>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10604
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-34852056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852056
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852056
    reference: chr 17
allele count: 5
allele frequency: 4.168264501392201e-5
allele num: 119954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.759C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1394G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2174C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1394G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2307C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*39C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1394G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3769C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*39C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1394G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.813C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-34852058-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852058
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852058
    reference: chr 17
allele count: 2
allele frequency: 1.667000066680003e-5
allele num: 119976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2172C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.811C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.757C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2305C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3767C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1392G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1392G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1392G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*37C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1392G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 27875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

17-34852067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852067
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852067
    reference: chr 17
allele count: 1
allele frequency: 8.323622440486099e-6
allele num: 120140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2163C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1383G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1383G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*28C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*28C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3758C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.802C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1383G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.748C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1383G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2296C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

17-34852072-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852072
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852072
    reference: chr 17
allele count: 1
allele frequency: 8.314901967305805e-6
allele num: 120266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.797A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1378T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2291A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3753A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1378T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.743A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2158A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*23A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*23A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1378T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1378T>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-34852080-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852080
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852081
    reference: chr 17
allele count: 1
allele frequency: 8.306061763875276e-6
allele num: 120394
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1367dupA
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.788dupT
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1367dupA
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2282dupT
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3744dupT
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1367dupA
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2149dupT
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*14dupT
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*14dupT
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1367dupA
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.734dupT
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

17-34852084-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852084
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852084
    reference: chr 17
allele count: 4
allele frequency: 3.319777574902481e-5
allele num: 120490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2279C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1366G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1366G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.731C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3741C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*11C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2146C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*11C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.785C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1366G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1366G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-34852087-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852087
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852086
    reference: chr 17
allele count: 1
allele frequency: 8.296964970213896e-6
allele num: 120526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*7delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1361delC
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2275delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3737delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2142delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*7delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1361delC
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.781delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1361delC
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.727delG
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1361delC
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: AC
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

17-34852091-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852091
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852091
    reference: chr 17
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2272T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1359A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2139T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1359A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*4T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*4T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1359A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.778T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3734T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1359A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.724T>C
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-34852094-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852094
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852094
    reference: chr 17
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.775T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2269T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1356A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3731T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.721T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.*1T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.*1T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2136T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1356A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1356A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1356A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

17-34852098-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852098
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852098
    reference: chr 17
allele count: 4
allele frequency: 3.315100281783524e-5
allele num: 120660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.771G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2265G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3727G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2910G>A
  hgvsp: ENST00000431794.3:c.2910G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.717G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2132G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1352C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2310G>A
  hgvsp: ENST00000268852.9:c.2310G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1352C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1352C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1352C>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly970Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

17-34852099-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852099
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852099
    reference: chr 17
allele count: 5
allele frequency: 4.143394600328157e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.770G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2264G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1351C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2131G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2309G>A
  hgvsp: ENSP00000268852.8:p.Gly770Glu
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2909G>A
  hgvsp: ENSP00000409936.2:p.Gly970Glu
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1351C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1351C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3726G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.716G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1351C>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly970Glu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

17-34852104-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852104
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852104
    reference: chr 17
allele count: 77
allele frequency: 6.380404699955254e-4
allele num: 120682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3721G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1346C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2304G>C
  hgvsp: ENST00000268852.9:c.2304G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2259G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.765G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1346C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2126G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2904G>C
  hgvsp: ENST00000431794.3:c.2904G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.711G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1346C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1346C>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12235
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Gly968Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

17-34852114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852114
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852114
    reference: chr 17
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2294C>T
  hgvsp: ENSP00000268852.8:p.Ala765Val
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1336G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2249C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.701C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2116C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3711C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.755C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1336G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2894C>T
  hgvsp: ENSP00000409936.2:p.Ala965Val
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1336G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1336G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala965Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

17-34852117-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852117
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852117
    reference: chr 17
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2891C>G
  hgvsp: ENSP00000409936.2:p.Ser964Cys
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2246C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3708C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1333G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2291C>G
  hgvsp: ENSP00000268852.8:p.Ser764Cys
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.698C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1333G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1333G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2113C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.752C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1333G>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser964Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ

17-34852121-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852121
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852121
    reference: chr 17
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1329A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1329A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2887T>C
  hgvsp: ENSP00000409936.2:p.Ser963Pro
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1329A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2287T>C
  hgvsp: ENSP00000268852.8:p.Ser763Pro
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.748T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3704T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.694T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2109T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2242T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1329A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser963Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

17-34852127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852127
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852127
    reference: chr 17
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2103G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3698G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2281G>A
  hgvsp: ENSP00000268852.8:p.Val761Met
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2881G>A
  hgvsp: ENSP00000409936.2:p.Val961Met
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1323C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.688G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1323C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2236G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.742G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1323C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1323C>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val961Met
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

17-34852128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852128
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852128
    reference: chr 17
allele count: 3
allele frequency: 2.484677820109326e-5
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2880C>T
  hgvsp: ENST00000431794.3:c.2880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2280C>T
  hgvsp: ENST00000268852.9:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1322G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.741C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1322G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.687C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2102C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2235C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1322G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1322G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3697C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His960His
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

17-34852136-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852136
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852136
    reference: chr 17
allele count: 2
allele frequency: 1.656369569178275e-5
allele num: 120746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1314G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.679C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2272C>G
  hgvsp: ENSP00000268852.8:p.Leu758Val
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2872C>G
  hgvsp: ENSP00000409936.2:p.Leu958Val
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1314G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3689C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2094C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2227C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1314G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.733C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1314G>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu958Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

17-34852137-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852137
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852137
    reference: chr 17
allele count: 1
allele frequency: 8.281847845891375e-6
allele num: 120746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3688G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1313C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1313C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.678G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1313C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2271G>A
  hgvsp: ENST00000268852.9:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1313C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2226G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2871G>A
  hgvsp: ENST00000431794.3:c.2871G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.732G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2093G>A
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg957Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

17-34852140-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852140
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852140
    reference: chr 17
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.675C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2268C>T
  hgvsp: ENST00000268852.9:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3685C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2090C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1310G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2223C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.729C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2868C>T
  hgvsp: ENST00000431794.3:c.2868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1310G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1310G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1310G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His956His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

17-34852151-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852151
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852151
    reference: chr 17
allele count: 2
allele frequency: 1.656259834042764e-5
allele num: 120754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2212C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2857C>T
  hgvsp: ENST00000431794.3:c.2857C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.664C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2079C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1299G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1299G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2257C>T
  hgvsp: ENST00000268852.9:c.2257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3674C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1299G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1299G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.718C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu953Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

17-34852155-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852155
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852155
    reference: chr 17
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2853T>A
  hgvsp: ENST00000431794.3:c.2853T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1295A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1295A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.660T>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3670T>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2253T>A
  hgvsp: ENST00000268852.9:c.2253T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2208T>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.714T>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1295A>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2075T>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1295A>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile951Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

17-34852158-CTGAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852158
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852154
    reference: chr 17
allele count: 7
allele frequency: 5.797101449275362e-5
allele num: 120750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2246_2249delATCA
  hgvsp: ENSP00000268852.8:p.Asn749ArgfsTer9
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1290_287-1287delGATT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2068_*2071delATCA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2846_2849delATCA
  hgvsp: ENSP00000409936.2:p.Asn949ArgfsTer9
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1290_*127-1287delGATT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1290_-89-1287delGATT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.707_710delATCA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.653_656delATCA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3663_3666delATCA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2201_*2204delATCA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1290_-89-1287delGATT
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn949ArgfsTer9
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: CTGAT
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-34852160-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852160
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852160
    reference: chr 17
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2070C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2848C>G
  hgvsp: ENSP00000409936.2:p.Gln950Glu
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1290G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2203C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.709C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1290G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2248C>G
  hgvsp: ENSP00000268852.8:p.Gln750Glu
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1290G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.655C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3665C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1290G>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln950Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

17-34852163-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852163
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852163
    reference: chr 17
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3662A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.706A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1287T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.652A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1287T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2245A>T
  hgvsp: ENSP00000268852.8:p.Asn749Tyr
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1287T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2200A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1287T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2067A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2845A>T
  hgvsp: ENSP00000409936.2:p.Asn949Tyr
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn949Tyr
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-34852163-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852163
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852163
    reference: chr 17
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3662A>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2845A>C
  hgvsp: ENSP00000409936.2:p.Asn949His
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.652A>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2067A>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1287T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2200A>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1287T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1287T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2245A>C
  hgvsp: ENSP00000268852.8:p.Asn749His
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1287T>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.706A>C
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn949His
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-34852166-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852166
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852166
    reference: chr 17
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2242T>C
  hgvsp: ENSP00000268852.8:p.Phe748Leu
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2842T>C
  hgvsp: ENSP00000409936.2:p.Phe948Leu
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2197T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.703T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2064T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1284A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1284A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.649T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3659T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1284A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1284A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe948Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

17-34852168-C-CATTACAAAAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852168
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852178
    reference: chr 17
allele count: 5
allele frequency: 4.140992513085536e-5
allele num: 120744
alternate allele: CATTACAAAAT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsp: ENSP00000268852.8:p.Gly747AspfsTer6
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsp: ENSP00000409936.2:p.Gly947AspfsTer6
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly947AspfsTer6
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

17-34852176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852176
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852176
    reference: chr 17
allele count: 12
allele frequency: 9.938382031405287e-5
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2187C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3649C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1274G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1274G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2054C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1274G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.693C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2232C>T
  hgvsp: ENST00000268852.9:c.2232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2832C>T
  hgvsp: ENST00000431794.3:c.2832C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1274G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.639C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser944Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-34852177-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852177
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852177
    reference: chr 17
allele count: 12
allele frequency: 9.938382031405287e-5
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2831G>T
  hgvsp: ENSP00000409936.2:p.Ser944Ile
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2231G>T
  hgvsp: ENSP00000268852.8:p.Ser744Ile
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1273C>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3648G>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1273C>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2053G>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.638G>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2186G>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1273C>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1273C>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.692G>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser944Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

17-34852179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852179
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852179
    reference: chr 17
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3646C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1271G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.690C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2051C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2829C>T
  hgvsp: ENST00000431794.3:c.2829C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1271G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.636C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2229C>T
  hgvsp: ENST00000268852.9:c.2229C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2184C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1271G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1271G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr943Tyr
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

17-34852184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852184
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852184
    reference: chr 17
allele count: 7
allele frequency: 5.797581580255093e-5
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.685C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1266G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1266G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2824C>T
  hgvsp: ENSP00000409936.2:p.Pro942Ser
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1266G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2179C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2224C>T
  hgvsp: ENSP00000268852.8:p.Pro742Ser
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3641C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1266G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2046C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.631C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro942Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

17-34852190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852190
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852190
    reference: chr 17
allele count: 2
allele frequency: 1.656561640658649e-5
allele num: 120732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1260G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2040C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2218C>T
  hgvsp: ENSP00000268852.8:p.Pro740Ser
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2173C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2818C>T
  hgvsp: ENSP00000409936.2:p.Pro940Ser
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1260G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1260G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.625C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.679C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1260G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3635C>T
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro940Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

17-34852192-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852192
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852192
    reference: chr 17
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2816A>T
  hgvsp: ENSP00000409936.2:p.Glu939Val
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2216A>T
  hgvsp: ENSP00000268852.8:p.Glu739Val
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2038A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.677A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3633A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.623A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1258T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1258T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1258T>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2171A>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1258T>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu939Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

17-34852205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852205
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852205
    reference: chr 17
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1245C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1245C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2025G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.664G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2203G>C
  hgvsp: ENSP00000268852.8:p.Asp735His
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2803G>C
  hgvsp: ENSP00000409936.2:p.Asp935His
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1245C>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3620G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2158G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.610G>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1245C>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp935His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

17-34852209-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852209
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852209
    reference: chr 17
allele count: 2
allele frequency: 1.657138122462507e-5
allele num: 120690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.660T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2199T>C
  hgvsp: ENST00000268852.9:c.2199T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1241A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2021T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1241A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.606T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2154T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1241A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2799T>C
  hgvsp: ENST00000431794.3:c.2799T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3616T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1241A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr933Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

17-34852213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852213
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852213
    reference: chr 17
allele count: 2
allele frequency: 1.657440249279014e-5
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.656G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3612G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1237C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1237C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2795G>A
  hgvsp: ENSP00000409936.2:p.Arg932Gln
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2017G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2195G>A
  hgvsp: ENSP00000268852.8:p.Arg732Gln
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.602G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1237C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1237C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2150G>A
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg932Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

17-34852218-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852218
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852218
    reference: chr 17
allele count: 1
allele frequency: 8.288712431410904e-6
allele num: 120646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.597A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2790A>G
  hgvsp: ENST00000431794.3:c.2790A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1232T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2145A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2190A>G
  hgvsp: ENST00000268852.9:c.2190A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2012A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1232T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3607A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.651A>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1232T>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1232T>C
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro930Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

17-34852222-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852222
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852222
    reference: chr 17
allele count: 1
allele frequency: 8.291461452995706e-6
allele num: 120606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.593C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1228G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2186C>T
  hgvsp: ENSP00000268852.8:p.Ser729Phe
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2141C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*2008C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2786C>T
  hgvsp: ENSP00000409936.2:p.Ser929Phe
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3603C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.647C>T
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1228G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1228G>A
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1228G>A
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser929Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

17-34852239-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852239
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852237
    reference: chr 17
allele count: 1
allele frequency: 8.354637659364713e-6
allele num: 119694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1209_-89-1208delTT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1209_-89-1208delTT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.574_575delAA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1209_*127-1208delTT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.628_629delAA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2122_*2123delAA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3584_3585delAA
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2767_2768delAA
  hgvsp: ENSP00000409936.2:p.Lys923ValfsTer12
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2167_2168delAA
  hgvsp: ENSP00000268852.8:p.Lys723ValfsTer12
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1209_287-1208delTT
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*1989_*1990delAA
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys923ValfsTer12
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: CTT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

17-34852245-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852245
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852245
    reference: chr 17
allele count: 1
allele frequency: 8.403785064793184e-6
allele num: 118994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1205C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2763G>A
  hgvsp: ENST00000431794.3:c.2763G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2163G>A
  hgvsp: ENST00000268852.9:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1205C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.570G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.624G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*1985G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1205C>T
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3580G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2118G>A
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1205C>T
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser921Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

17-34852246-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852246
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852246
    reference: chr 17
allele count: 1
allele frequency: 8.420910805712745e-6
allele num: 118752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1204G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*1984C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1204G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.623C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468792
  ensembl transcript: ENST00000586908
  gene symbol: MYO19
  hgvsc: ENST00000586908.1:c.*2117C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.569C>G
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2162C>G
  hgvsp: ENSP00000268852.8:p.Ser721Trp
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1204G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1204G>C
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2762C>G
  hgvsp: ENSP00000409936.2:p.Ser921Trp
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3579C>G
  variant of: http://identifiers.org/hgnc/26234
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser921Trp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS

17-34852247-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34852247
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 34852247
    reference: chr 17
allele count: 1
allele frequency: 8.419209267865562e-6
allele num: 118776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000593275
  gene symbol: MYO19
  hgvsc: ENST00000593275.1:n.568T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000468488
  ensembl transcript: ENST00000591794
  gene symbol: MYO19
  hgvsc: ENST00000591794.1:c.*1983T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000466628
  ensembl transcript: ENST00000590858
  gene symbol: ZNHIT3
  hgvsc: ENST00000590858.1:c.-89-1203A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467184
  ensembl transcript: ENST00000586660
  gene symbol: ZNHIT3
  hgvsc: ENST00000586660.1:c.*127-1203A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000592110
  gene symbol: MYO19
  hgvsc: ENST00000592110.1:n.622T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141140
  ensembl transcript: ENST00000588377
  gene symbol: MYO19
  hgvsc: ENST00000588377.1:n.3578T>C
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000467917
  ensembl transcript: ENST00000592616
  gene symbol: ZNHIT3
  hgvsc: ENST00000592616.1:c.287-1203A>G
  variant of: http://identifiers.org/hgnc/12309
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000268852
  ensembl transcript: ENST00000268852
  gene symbol: MYO19
  hgvsc: ENST00000268852.9:c.2161T>C
  hgvsp: ENSP00000268852.8:p.Ser721Pro
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141140
  ensembl protein: ENSP00000409936
  ensembl transcript: ENST00000431794
  gene symbol: MYO19
  hgvsc: ENST00000431794.3:c.2761T>C
  hgvsp: ENSP00000409936.2:p.Ser921Pro
  variant of: http://identifiers.org/hgnc/26234
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108278
  ensembl protein: ENSP00000465693
  ensembl transcript: ENST00000588253
  gene symbol: ZNHIT3
  hgvsc: ENST00000588253.1:c.-89-1203A>G
  variant of: http://identifiers.org/hgnc/12309
canonical: true
consequence: missense
filter: PASS
hgvs: p.Ser921Pro
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2018
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42758
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.12369871402327e-5
allele num: 16330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.941e0

FS
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

DP
type: SiteQuality
SIO_000300: 1.750292e6

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2994
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42600
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.748258e6

MQ
type: SiteQuality
SIO_000300: 5.757e1

MQRankSum
type: SiteQuality
SIO_000300: -1.449e0

FS
type: SiteQuality
SIO_000300: 2.707e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.553e0

QD
type: SiteQuality
SIO_000300: 1.813e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41719
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1823
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506387081224391e-5
allele num: 66384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 1.197e1

FS
type: SiteQuality
SIO_000300: 4.789e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 1.736842e6

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8617
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66258
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.503e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.727726e6

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.311e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.035e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1889
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510984859931704e-5
allele num: 66182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.7606e1

DP
type: SiteQuality
SIO_000300: 1.722589e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: -1.607e0

QD
type: SiteQuality
SIO_000300: 1.242e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.273e0

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.043939439726814e-5
allele num: 66182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.607e0

MQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

FS
type: SiteQuality
SIO_000300: 1.7606e1

DP
type: SiteQuality
SIO_000300: 1.722589e6

QD
type: SiteQuality
SIO_000300: 1.242e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65960
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.858710562414266e-5
allele num: 14580
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 6.71e0

DP
type: SiteQuality
SIO_000300: 1.709462e6

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.051401869158879e-3
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65544
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.687242e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
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SIO_000300: -2.504e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525692664469669e-5
allele num: 65544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

QD
type: SiteQuality
SIO_000300: 1.225e1

DP
type: SiteQuality
SIO_000300: 1.687242e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.504e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518833535844471e-4
allele num: 6584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.268e0

VQSLOD
type: SiteQuality
SIO_000300: -1.438e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.670054e6

QD
type: SiteQuality
SIO_000300: 1.657e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.565e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 5.684e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.546e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183992422448496e-4
allele num: 8446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12872
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

DP
type: SiteQuality
SIO_000300: 1.650072e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
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SIO_000300: 2.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 9.91e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542353013757789e-5
allele num: 64836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.457e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.371742112482853e-3
allele num: 10206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 7.946598855689765e-5
allele num: 12584
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FS
type: SiteQuality
SIO_000300: 6.55e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549234678069034e-5
allele num: 64548
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.022e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6834
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GenotypeQuality
all individuals: 210
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GenotypeQuality
all individuals: 1502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 32076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1439
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 9.75e1
variant carriers: 278

GenotypeQuality
all individuals: 733
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.331112591605596e-4
allele num: 12008
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.873617693522907e-5
allele num: 10128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.403846153846154e-3
allele num: 832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63716
num of homozygotes: 0

East Asian
type: Population
allele count: 281
allele frequency: 3.387991319025802e-2
allele num: 8294
num of homozygotes: 6

DP
type: SiteQuality
SIO_000300: 1.570577e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.48e-2

QD
type: SiteQuality
SIO_000300: 1.57e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 310
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31374
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.922603691208574e-5
allele num: 10078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11656
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.075e0

QD
type: SiteQuality
SIO_000300: 1.803e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.535183e6

MQRankSum
type: SiteQuality
SIO_000300: -1.72e0

FS
type: SiteQuality
SIO_000300: 1.739e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.065e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.766e0

GenotypeQuality
all individuals: 596
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2850
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1154
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3514
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
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variant carriers: 0

GenotypeQuality
all individuals: 449
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variant carriers: 0

GenotypeQuality
all individuals: 2027
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
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variant carriers: 0

GenotypeQuality
all individuals: 2777
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9958
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.6022046335758e-5
allele num: 62414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-2

DP
type: SiteQuality
SIO_000300: 1.421982e6

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
all individuals: 4535
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2849
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3323
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11001
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23350
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10864
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.025413473174667e-4
allele num: 9916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62012
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 6.999e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

DP
type: SiteQuality
SIO_000300: 1.360662e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

QD
type: SiteQuality
SIO_000300: 1.224e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

GenotypeQuality
all individuals: 3685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
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variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
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variant carriers: 0

GenotypeQuality
all individuals: 5320
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2849
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 20061
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.02552157180474e-4
allele num: 9874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.250693802035152e-5
allele num: 10810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-1

FS
type: SiteQuality
SIO_000300: 2.654e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.011e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.32061e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.671e1

GenotypeQuality
all individuals: 1820
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3694
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 537
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11090
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.26008064516129e-4
allele num: 7936
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61626
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.028397565922921e-4
allele num: 9860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.98019801980198e-4
allele num: 10100
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.318605e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

FS
type: SiteQuality
SIO_000300: 9.66e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

QD
type: SiteQuality
SIO_000300: 1.492e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 1896
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5531
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3824
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19753
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61484
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.264862130027827e-4
allele num: 7906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6268
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.303204e6

QD
type: SiteQuality
SIO_000300: 1.418e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.773e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.08e-1

GenotypeQuality
all individuals: 5922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18101
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 743
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61466
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.26806999746386e-3
allele num: 7886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.321e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

DP
type: SiteQuality
SIO_000300: 1.281657e6

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.258e1

GenotypeQuality
all individuals: 1037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6323
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4656
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3182
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2840
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61174
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.379103357719002e-5
allele num: 10662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.893e0

MQ
type: SiteQuality
SIO_000300: 5.845e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

DP
type: SiteQuality
SIO_000300: 1.258827e6

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

QD
type: SiteQuality
SIO_000300: 2.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.206e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9126
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.21593991237221e-4
allele num: 9586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.069e0

DP
type: SiteQuality
SIO_000300: 1.174054e6

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.493e1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8784
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.0530749789385e-4
allele num: 9496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.202e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.65e0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

DP
type: SiteQuality
SIO_000300: 1.153488e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.7262451869333e-4
allele num: 16102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66334
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.79e-1

QD
type: SiteQuality
SIO_000300: 1.122e1

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

DP
type: SiteQuality
SIO_000300: 1.771014e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.536249359418804e-5
allele num: 66346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.368e1

FS
type: SiteQuality
SIO_000300: 9.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

DP
type: SiteQuality
SIO_000300: 1.771971e6

MQRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.639e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506977304921788e-5
allele num: 66358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.701e0

FS
type: SiteQuality
SIO_000300: 2.6882e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

DP
type: SiteQuality
SIO_000300: 1.772937e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

VQSLOD
type: SiteQuality
SIO_000300: -5.06e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.03e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.114e0

MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

InbreedingCoeff
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SIO_000300: 8.0e-4

BaseQRankSum
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SIO_000300: -3.994e0

DP
type: SiteQuality
SIO_000300: 1.783006e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.78735e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.561e1

BaseQRankSum
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SIO_000300: 1.21e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
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num of homozygotes: 0

ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: 5.0e-4

FS
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BaseQRankSum
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SIO_000300: 8.500000000000001e-2

DP
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SIO_000300: 1.791642e6

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.66e0

QD
type: SiteQuality
SIO_000300: 1.284e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66550
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European (Finnish)
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allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.087168249330411e-5
allele num: 16428
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QD
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SIO_000300: 1.157e1

VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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SIO_000300: 5.984e1

MQRankSum
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FS
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SIO_000300: 1.331e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.68e-1

BaseQRankSum
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SIO_000300: -2.982e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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BaseQRankSum
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SIO_000300: 1.49e0

ReadPosRankSum
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SIO_000300: 1.03e-1

ClippingRankSum
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SIO_000300: 3.86e-1

FS
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SIO_000300: 1.093e0

VQSLOD
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DP
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MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.121e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50159168718842e-5
allele num: 66596
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

FS
type: SiteQuality
SIO_000300: 5.7e-1

DP
type: SiteQuality
SIO_000300: 1.795452e6

BaseQRankSum
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SIO_000300: 3.61e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.332e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8624
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -3.2e0

FS
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MQ
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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Latino
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European (Non-Finnish)
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allele frequency: 7.50030001200048e-5
allele num: 66664
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 77

East Asian
type: Population
allele count: 0
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num of homozygotes: 0

African
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allele frequency: 1.019991840065279e-4
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South Asian
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allele frequency: 1.151934036619377e-3
allele num: 16494
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Latino
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allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele count: 52
allele frequency: 7.799610019499025e-4
allele num: 66670
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
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MQ
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BaseQRankSum
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VQSLOD
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SIO_000300: 2.73e0

QD
type: SiteQuality
SIO_000300: 1.001e1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.802156e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

GenotypeQuality
all individuals: 528
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9523
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4073
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
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SIO_000300: -2.568e0

MQRankSum
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SIO_000300: 1.53e0

QD
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SIO_000300: 1.019e1

MQ
type: SiteQuality
SIO_000300: 5.989e1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

FS
type: SiteQuality
SIO_000300: 2.414e0

DP
type: SiteQuality
SIO_000300: 1.794923e6

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
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SIO_000300: 1.794975e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.382e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9521
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2259
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.214e1

FS
type: SiteQuality
SIO_000300: 5.837e0

VQSLOD
type: SiteQuality
SIO_000300: -4.39e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.795073e6

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 717
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4070
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variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9527
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 9.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

FS
type: SiteQuality
SIO_000300: 4.343e0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 1.79507e6

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.424e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.795252e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997781641585227e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.73e-1

DP
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MQ
type: SiteQuality
SIO_000300: 5.96e1

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.85e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
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DP
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ClippingRankSum
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QD
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 2.064e0

ReadPosRankSum
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SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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African
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66724
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African
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European (Finnish)
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South Asian
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Latino
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East Asian
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Other
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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African
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South Asian
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Other
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European (Non-Finnish)
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DP
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FS
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66724
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Latino
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allele num: 11574
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Other
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European (Finnish)
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South Asian
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MQ
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FS
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Other
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QD
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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MQ
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QD
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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Other
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.145e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.46e0

QD
type: SiteQuality
SIO_000300: 1.111e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.621e0

DP
type: SiteQuality
SIO_000300: 1.794208e6

VQSLOD
type: SiteQuality
SIO_000300: -3.523e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.837e0

FS
type: SiteQuality
SIO_000300: 1.2166e1

DP
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.148e1

QD
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SIO_000300: 4.08e0

BaseQRankSum
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SIO_000300: 3.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.667e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 9.25e1
variant carriers: 0

Latino
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allele count: 12
allele frequency: 1.036806635562468e-3
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.865e1

DP
type: SiteQuality
SIO_000300: 1.79427e6

ClippingRankSum
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SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.729e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.036806635562468e-3
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.879e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.673e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

DP
type: SiteQuality
SIO_000300: 1.794194e6

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4035
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 1.38e0

ClippingRankSum
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SIO_000300: -1.082e0

MQ
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SIO_000300: 5.938e1

BaseQRankSum
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SIO_000300: -4.436e0

MQRankSum
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SIO_000300: -6.47e-1

QD
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SIO_000300: 1.278e1

DP
type: SiteQuality
SIO_000300: 1.793395e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.18e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39611
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.116883116883117e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
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QD
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SIO_000300: 1.32e1

BaseQRankSum
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SIO_000300: -4.213e0

ReadPosRankSum
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SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

DP
type: SiteQuality
SIO_000300: 1.79318e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

MQRankSum
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InbreedingCoeff
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SIO_000300: 4.5e-3

BaseQRankSum
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QD
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FS
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VQSLOD
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MQ
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SIO_000300: 5.977e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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FS
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ReadPosRankSum
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ClippingRankSum
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QD
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SIO_000300: 1.522e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.303000000000001e0

MQRankSum
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InbreedingCoeff
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SIO_000300: 3.1e-3

ReadPosRankSum
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BaseQRankSum
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SIO_000300: -1.27e0

DP
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SIO_000300: 1.791716e6

VQSLOD
type: SiteQuality
SIO_000300: -3.858e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.408e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 2.8e0

FS
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SIO_000300: 1.4055e1

BaseQRankSum
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VQSLOD
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MQ
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QD
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ClippingRankSum
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SIO_000300: -7.25e-1

ReadPosRankSum
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SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 1.791401e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
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MQRankSum
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QD
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InbreedingCoeff
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SIO_000300: 3.1e-3

VQSLOD
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SIO_000300: 1.57e0

BaseQRankSum
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SIO_000300: 4.13e0

ClippingRankSum
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SIO_000300: -6.06e-1

ReadPosRankSum
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SIO_000300: 1.57e0

DP
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SIO_000300: 1.79095e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQRankSum
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SIO_000300: 6.8e-2

BaseQRankSum
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VQSLOD
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FS
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MQ
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SIO_000300: 6.0e1

QD
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SIO_000300: 1.623e1

InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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SIO_000300: -3.92e-1

ReadPosRankSum
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DP
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SIO_000300: 1.789457e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.539e0

DP
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -5.933e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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VQSLOD
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SIO_000300: 1.54e0

InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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MQ
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MQRankSum
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52151421094273e-5
allele num: 65724
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
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DP
type: SiteQuality
SIO_000300: 1.731903e6

BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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QD
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MQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.19019281123542e-4
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.72027e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.024e0

QD
type: SiteQuality
SIO_000300: 1.781e1

VQSLOD
type: SiteQuality
SIO_000300: -3.424e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 0.0e0