16-1397917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397917
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397917
    reference: chr 16
allele count: 1
allele frequency: 8.595791500481364e-6
allele num: 116336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1450C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2940C>T
  hgvsp: ENST00000421665.2:c.2940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.2979C>T
  hgvsp: ENST00000562208.1:c.2979C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3153C>T
  hgvsp: ENST00000324385.5:c.3153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2964C>T
  hgvsp: ENST00000568887.1:c.2964C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3099C>T
  hgvsp: ENST00000397489.1:c.3099C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.534C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3048C>T
  hgvsp: ENST00000426824.3:c.3048C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3099C>T
  hgvsp: ENST00000397488.2:c.3099C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile1051Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

16-1397918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397918
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397918
    reference: chr 16
allele count: 2
allele frequency: 1.717386824208285e-5
allele num: 116456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3049G>A
  hgvsp: ENSP00000407242.3:p.Val1017Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3100G>A
  hgvsp: ENSP00000380625.2:p.Val1034Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.535G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2965G>A
  hgvsp: ENSP00000457644.1:p.Val989Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2941G>A
  hgvsp: ENSP00000409533.2:p.Val981Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3100G>A
  hgvsp: ENSP00000380626.1:p.Val1034Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.2980G>A
  hgvsp: ENSP00000458134.1:p.Val994Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3154G>A
  hgvsp: ENSP00000324510.5:p.Val1052Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1449G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val1052Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

16-1397926-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397926
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397926
    reference: chr 16
allele count: 1
allele frequency: 8.556662217202314e-6
allele num: 116868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2949G>A
  hgvsp: ENST00000421665.2:c.2949G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.2988G>A
  hgvsp: ENST00000562208.1:c.2988G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3162G>A
  hgvsp: ENST00000324385.5:c.3162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3108G>A
  hgvsp: ENST00000397488.2:c.3108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3108G>A
  hgvsp: ENST00000397489.1:c.3108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2973G>A
  hgvsp: ENST00000568887.1:c.2973G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1441G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.543G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3057G>A
  hgvsp: ENST00000426824.3:c.3057G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu1054Leu
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-1397934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397934
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397934
    reference: chr 16
allele count: 4
allele frequency: 3.412270524807207e-5
allele num: 117224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3116C>T
  hgvsp: ENSP00000380625.2:p.Pro1039Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.551C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3170C>T
  hgvsp: ENSP00000324510.5:p.Pro1057Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.2996C>T
  hgvsp: ENSP00000458134.1:p.Pro999Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3116C>T
  hgvsp: ENSP00000380626.1:p.Pro1039Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1433C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2981C>T
  hgvsp: ENSP00000457644.1:p.Pro994Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2957C>T
  hgvsp: ENSP00000409533.2:p.Pro986Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3065C>T
  hgvsp: ENSP00000407242.3:p.Pro1022Leu
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro1057Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

16-1397935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397935
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397935
    reference: chr 16
allele count: 13
allele frequency: 1.10870418066761e-4
allele num: 117254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2958G>A
  hgvsp: ENST00000421665.2:c.2958G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3117G>A
  hgvsp: ENST00000397488.2:c.3117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3117G>A
  hgvsp: ENST00000397489.1:c.3117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1432G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.552G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3066G>A
  hgvsp: ENST00000426824.3:c.3066G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3171G>A
  hgvsp: ENST00000324385.5:c.3171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.2997G>A
  hgvsp: ENST00000562208.1:c.2997G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2982G>A
  hgvsp: ENST00000568887.1:c.2982G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41359
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro1057Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

16-1397944-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397944
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397944
    reference: chr 16
allele count: 1
allele frequency: 8.511507558218711e-6
allele num: 117488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3126T>A
  hgvsp: ENSP00000380626.1:p.Phe1042Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3075T>A
  hgvsp: ENSP00000407242.3:p.Phe1025Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3126T>A
  hgvsp: ENSP00000380625.2:p.Phe1042Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2991T>A
  hgvsp: ENSP00000457644.1:p.Phe997Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3180T>A
  hgvsp: ENSP00000324510.5:p.Phe1060Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1423T>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3006T>A
  hgvsp: ENSP00000458134.1:p.Phe1002Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2967T>A
  hgvsp: ENSP00000409533.2:p.Phe989Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.561T>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe1060Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS

16-1397945-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397945
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397945
    reference: chr 16
allele count: 1
allele frequency: 8.509189925119129e-6
allele num: 117520
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3181C>G
  hgvsp: ENSP00000324510.5:p.Pro1061Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2968C>G
  hgvsp: ENSP00000409533.2:p.Pro990Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3076C>G
  hgvsp: ENSP00000407242.3:p.Pro1026Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.562C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.2992C>G
  hgvsp: ENSP00000457644.1:p.Pro998Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3127C>G
  hgvsp: ENSP00000380626.1:p.Pro1043Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1422C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3127C>G
  hgvsp: ENSP00000380625.2:p.Pro1043Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3007C>G
  hgvsp: ENSP00000458134.1:p.Pro1003Ala
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10758
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro1061Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

16-1397954-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397954
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397954
    reference: chr 16
allele count: 4
allele frequency: 3.399510470492249e-5
allele num: 117664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3085C>T
  hgvsp: ENSP00000407242.3:p.Arg1029Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2977C>T
  hgvsp: ENSP00000409533.2:p.Arg993Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3136C>T
  hgvsp: ENSP00000380626.1:p.Arg1046Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3001C>T
  hgvsp: ENSP00000457644.1:p.Arg1001Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3016C>T
  hgvsp: ENSP00000458134.1:p.Arg1006Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3136C>T
  hgvsp: ENSP00000380625.2:p.Arg1046Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3190C>T
  hgvsp: ENSP00000324510.5:p.Arg1064Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.571C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1413C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10744
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg1064Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-1397955-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397955
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397955
    reference: chr 16
allele count: 12
allele frequency: 1.019593182320254e-4
allele num: 117694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3137G>A
  hgvsp: ENSP00000380625.2:p.Arg1046His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3137G>A
  hgvsp: ENSP00000380626.1:p.Arg1046His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3086G>A
  hgvsp: ENSP00000407242.3:p.Arg1029His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3191G>A
  hgvsp: ENSP00000324510.5:p.Arg1064His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2978G>A
  hgvsp: ENSP00000409533.2:p.Arg993His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1412G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3017G>A
  hgvsp: ENSP00000458134.1:p.Arg1006His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3002G>A
  hgvsp: ENSP00000457644.1:p.Arg1001His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.572G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg1064His
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

16-1397955-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397955
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397955
    reference: chr 16
allele count: 1
allele frequency: 8.496609852668785e-6
allele num: 117694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3017G>C
  hgvsp: ENSP00000458134.1:p.Arg1006Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.572G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3137G>C
  hgvsp: ENSP00000380625.2:p.Arg1046Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3002G>C
  hgvsp: ENSP00000457644.1:p.Arg1001Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3191G>C
  hgvsp: ENSP00000324510.5:p.Arg1064Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3086G>C
  hgvsp: ENSP00000407242.3:p.Arg1029Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3137G>C
  hgvsp: ENSP00000380626.1:p.Arg1046Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2978G>C
  hgvsp: ENSP00000409533.2:p.Arg993Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1412G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg1064Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-1397957-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397957
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397957
    reference: chr 16
allele count: 1
allele frequency: 8.492569002123141e-6
allele num: 117750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3004A>G
  hgvsp: ENSP00000457644.1:p.Ser1002Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.574A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3088A>G
  hgvsp: ENSP00000407242.3:p.Ser1030Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3139A>G
  hgvsp: ENSP00000380625.2:p.Ser1047Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2980A>G
  hgvsp: ENSP00000409533.2:p.Ser994Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3193A>G
  hgvsp: ENSP00000324510.5:p.Ser1065Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3139A>G
  hgvsp: ENSP00000380626.1:p.Ser1047Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3019A>G
  hgvsp: ENSP00000458134.1:p.Ser1007Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1410A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser1065Gly
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

16-1397963-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397963
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397963
    reference: chr 16
allele count: 2
allele frequency: 1.697475853405985e-5
allele num: 117822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1404A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3145A>G
  hgvsp: ENSP00000380625.2:p.Arg1049Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3199A>G
  hgvsp: ENSP00000324510.5:p.Arg1067Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.580A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3145A>G
  hgvsp: ENSP00000380626.1:p.Arg1049Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3025A>G
  hgvsp: ENSP00000458134.1:p.Arg1009Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3010A>G
  hgvsp: ENSP00000457644.1:p.Arg1004Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3094A>G
  hgvsp: ENSP00000407242.3:p.Arg1032Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2986A>G
  hgvsp: ENSP00000409533.2:p.Arg996Gly
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10750
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg1067Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-1397971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397971
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397971
    reference: chr 16
allele count: 2
allele frequency: 1.696813384463977e-5
allele num: 117868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3033G>A
  hgvsp: ENST00000562208.1:c.3033G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3207G>A
  hgvsp: ENST00000324385.5:c.3207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1396G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2994G>A
  hgvsp: ENST00000421665.2:c.2994G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3153G>A
  hgvsp: ENST00000397489.1:c.3153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3018G>A
  hgvsp: ENST00000568887.1:c.3018G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.588G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3153G>A
  hgvsp: ENST00000397488.2:c.3153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3102G>A
  hgvsp: ENST00000426824.3:c.3102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln1069Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

16-1397972-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397972
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397972
    reference: chr 16
allele count: 1
allele frequency: 8.485650764557135e-6
allele num: 117846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3154G>C
  hgvsp: ENSP00000380626.1:p.Val1052Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3034G>C
  hgvsp: ENSP00000458134.1:p.Val1012Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.589G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2995G>C
  hgvsp: ENSP00000409533.2:p.Val999Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1395G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3208G>C
  hgvsp: ENSP00000324510.5:p.Val1070Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3103G>C
  hgvsp: ENSP00000407242.3:p.Val1035Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3019G>C
  hgvsp: ENSP00000457644.1:p.Val1007Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3154G>C
  hgvsp: ENSP00000380625.2:p.Val1052Leu
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val1070Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

16-1397973-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397973
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397973
    reference: chr 16
allele count: 2
allele frequency: 1.697389415079608e-5
allele num: 117828
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.2996T>G
  hgvsp: ENSP00000409533.2:p.Val999Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3104T>G
  hgvsp: ENSP00000407242.3:p.Val1035Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3155T>G
  hgvsp: ENSP00000380626.1:p.Val1052Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3209T>G
  hgvsp: ENSP00000324510.5:p.Val1070Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1394T>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.590T>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3020T>G
  hgvsp: ENSP00000457644.1:p.Val1007Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3155T>G
  hgvsp: ENSP00000380625.2:p.Val1052Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3035T>G
  hgvsp: ENSP00000458134.1:p.Val1012Gly
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val1070Gly
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

16-1397979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397979
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397979
    reference: chr 16
allele count: 1
allele frequency: 8.486226853816256e-6
allele num: 117838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3026C>T
  hgvsp: ENSP00000457644.1:p.Thr1009Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3002C>T
  hgvsp: ENSP00000409533.2:p.Thr1001Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3215C>T
  hgvsp: ENSP00000324510.5:p.Thr1072Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3161C>T
  hgvsp: ENSP00000380625.2:p.Thr1054Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3041C>T
  hgvsp: ENSP00000458134.1:p.Thr1014Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1388C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3161C>T
  hgvsp: ENSP00000380626.1:p.Thr1054Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3110C>T
  hgvsp: ENSP00000407242.3:p.Thr1037Ile
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.596C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr1072Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-1397981-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397981
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397981
    reference: chr 16
allele count: 1
allele frequency: 8.485650764557135e-6
allele num: 117846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3112C>G
  hgvsp: ENSP00000407242.3:p.Arg1038Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3163C>G
  hgvsp: ENSP00000380626.1:p.Arg1055Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3217C>G
  hgvsp: ENSP00000324510.5:p.Arg1073Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3163C>G
  hgvsp: ENSP00000380625.2:p.Arg1055Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3028C>G
  hgvsp: ENSP00000457644.1:p.Arg1010Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1386C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3004C>G
  hgvsp: ENSP00000409533.2:p.Arg1002Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3043C>G
  hgvsp: ENSP00000458134.1:p.Arg1015Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.598C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg1073Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

16-1397981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397981
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397981
    reference: chr 16
allele count: 2
allele frequency: 1.697130152911427e-5
allele num: 117846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3112C>T
  hgvsp: ENSP00000407242.3:p.Arg1038Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3004C>T
  hgvsp: ENSP00000409533.2:p.Arg1002Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1386C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3043C>T
  hgvsp: ENSP00000458134.1:p.Arg1015Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3028C>T
  hgvsp: ENSP00000457644.1:p.Arg1010Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3217C>T
  hgvsp: ENSP00000324510.5:p.Arg1073Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3163C>T
  hgvsp: ENSP00000380626.1:p.Arg1055Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3163C>T
  hgvsp: ENSP00000380625.2:p.Arg1055Trp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.598C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg1073Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

16-1397982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397982
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397982
    reference: chr 16
allele count: 5
allele frequency: 4.24073822771068e-5
allele num: 117904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3113G>A
  hgvsp: ENSP00000407242.3:p.Arg1038Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3218G>A
  hgvsp: ENSP00000324510.5:p.Arg1073Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3029G>A
  hgvsp: ENSP00000457644.1:p.Arg1010Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3164G>A
  hgvsp: ENSP00000380625.2:p.Arg1055Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3044G>A
  hgvsp: ENSP00000458134.1:p.Arg1015Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3164G>A
  hgvsp: ENSP00000380626.1:p.Arg1055Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3005G>A
  hgvsp: ENSP00000409533.2:p.Arg1002Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1385G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.599G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9256
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg1073Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

16-1397985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397985
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397985
    reference: chr 16
allele count: 4
allele frequency: 3.39149751572807e-5
allele num: 117942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3116C>T
  hgvsp: ENSP00000407242.3:p.Thr1039Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3167C>T
  hgvsp: ENSP00000380626.1:p.Thr1056Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1382C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3032C>T
  hgvsp: ENSP00000457644.1:p.Thr1011Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3047C>T
  hgvsp: ENSP00000458134.1:p.Thr1016Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3167C>T
  hgvsp: ENSP00000380625.2:p.Thr1056Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3008C>T
  hgvsp: ENSP00000409533.2:p.Thr1003Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3221C>T
  hgvsp: ENSP00000324510.5:p.Thr1074Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.602C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr1074Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

16-1397986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397986
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397986
    reference: chr 16
allele count: 18
allele frequency: 1.526613970214065e-4
allele num: 117908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3117G>A
  hgvsp: ENST00000426824.3:c.3117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3033G>A
  hgvsp: ENST00000568887.1:c.3033G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3168G>A
  hgvsp: ENST00000397488.2:c.3168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.603G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3222G>A
  hgvsp: ENST00000324385.5:c.3222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3168G>A
  hgvsp: ENST00000397489.1:c.3168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3009G>A
  hgvsp: ENST00000421665.2:c.3009G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1381G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3048G>A
  hgvsp: ENST00000562208.1:c.3048G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1074Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

16-1397995-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1397995
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1397995
    reference: chr 16
allele count: 1
allele frequency: 8.478312476684641e-6
allele num: 117948
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3177T>C
  hgvsp: ENST00000397488.2:c.3177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3018T>C
  hgvsp: ENST00000421665.2:c.3018T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3231T>C
  hgvsp: ENST00000324385.5:c.3231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3042T>C
  hgvsp: ENST00000568887.1:c.3042T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3126T>C
  hgvsp: ENST00000426824.3:c.3126T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1372T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3177T>C
  hgvsp: ENST00000397489.1:c.3177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3057T>C
  hgvsp: ENST00000562208.1:c.3057T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.612T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro1077Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/16-1398001-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398001
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398001
    reference: chr 16
allele count: 1
allele frequency: 8.479894170920747e-6
allele num: 117926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3183C>A
  hgvsp: ENSP00000380626.1:p.Tyr1061Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3132C>A
  hgvsp: ENSP00000407242.3:p.Tyr1044Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3237C>A
  hgvsp: ENSP00000324510.5:p.Tyr1079Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3048C>A
  hgvsp: ENSP00000457644.1:p.Tyr1016Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1366C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3063C>A
  hgvsp: ENSP00000458134.1:p.Tyr1021Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3024C>A
  hgvsp: ENSP00000409533.2:p.Tyr1008Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3183C>A
  hgvsp: ENSP00000380625.2:p.Tyr1061Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.618C>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13849
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr1079Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

16-1398001-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398001
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398001
    reference: chr 16
allele count: 1
allele frequency: 8.479894170920747e-6
allele num: 117926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1366C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3183C>T
  hgvsp: ENST00000397489.1:c.3183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3132C>T
  hgvsp: ENST00000426824.3:c.3132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.618C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3024C>T
  hgvsp: ENST00000421665.2:c.3024C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3048C>T
  hgvsp: ENST00000568887.1:c.3048C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3237C>T
  hgvsp: ENST00000324385.5:c.3237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3183C>T
  hgvsp: ENST00000397488.2:c.3183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3063C>T
  hgvsp: ENST00000562208.1:c.3063C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr1079Tyr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

16-1398004-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398004
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398004
    reference: chr 16
allele count: 1
allele frequency: 8.484498820654664e-6
allele num: 117862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3186C>T
  hgvsp: ENST00000397489.1:c.3186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3051C>T
  hgvsp: ENST00000568887.1:c.3051C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3066C>T
  hgvsp: ENST00000562208.1:c.3066C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1363C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3027C>T
  hgvsp: ENST00000421665.2:c.3027C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3135C>T
  hgvsp: ENST00000426824.3:c.3135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3186C>T
  hgvsp: ENST00000397488.2:c.3186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.621C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3240C>T
  hgvsp: ENST00000324385.5:c.3240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp1080Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

16-1398005-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398005
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398005
    reference: chr 16
allele count: 3
allele frequency: 2.545608824777259e-5
allele num: 117850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3187G>A
  hgvsp: ENSP00000380626.1:p.Glu1063Lys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3028G>A
  hgvsp: ENSP00000409533.2:p.Glu1010Lys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3052G>A
  hgvsp: ENSP00000457644.1:p.Glu1018Lys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3241G>A
  hgvsp: ENSP00000324510.5:p.Glu1081Lys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.622G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1362G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3067G>A
  hgvsp: ENSP00000458134.1:p.Glu1023Lys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3187G>A
  hgvsp: ENSP00000380625.2:p.Glu1063Lys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3136G>A
  hgvsp: ENSP00000407242.3:p.Glu1046Lys
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Glu1081Lys
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

16-1398005-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398005
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398005
    reference: chr 16
allele count: 1
allele frequency: 8.485362749257531e-6
allele num: 117850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.622G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3241G>T
  hgvsp: ENSP00000324510.5:p.Glu1081Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3067G>T
  hgvsp: ENSP00000458134.1:p.Glu1023Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1362G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3028G>T
  hgvsp: ENSP00000409533.2:p.Glu1010Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3187G>T
  hgvsp: ENSP00000380625.2:p.Glu1063Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3136G>T
  hgvsp: ENSP00000407242.3:p.Glu1046Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3052G>T
  hgvsp: ENSP00000457644.1:p.Glu1018Ter
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3187G>T
  hgvsp: ENSP00000380626.1:p.Glu1063Ter
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu1081Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

16-1398007-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398007
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398007
    reference: chr 16
allele count: 1
allele frequency: 8.486658972095866e-6
allele num: 117832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3054A>G
  hgvsp: ENST00000568887.1:c.3054A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.624A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3243A>G
  hgvsp: ENST00000324385.5:c.3243A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3189A>G
  hgvsp: ENST00000397488.2:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3189A>G
  hgvsp: ENST00000397489.1:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3069A>G
  hgvsp: ENST00000562208.1:c.3069A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3138A>G
  hgvsp: ENST00000426824.3:c.3138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3030A>G
  hgvsp: ENST00000421665.2:c.3030A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1360A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu1081Glu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

16-1398010-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398010
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398010
    reference: chr 16
allele count: 2
allele frequency: 1.697302985555952e-5
allele num: 117834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3072C>T
  hgvsp: ENST00000562208.1:c.3072C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1357C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3141C>T
  hgvsp: ENST00000426824.3:c.3141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.627C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3246C>T
  hgvsp: ENST00000324385.5:c.3246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3192C>T
  hgvsp: ENST00000397488.2:c.3192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3033C>T
  hgvsp: ENST00000421665.2:c.3033C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3057C>T
  hgvsp: ENST00000568887.1:c.3057C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3192C>T
  hgvsp: ENST00000397489.1:c.3192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1082Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

16-1398010-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398010
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398008
    reference: chr 16
allele count: 1
allele frequency: 8.486514927779759e-6
allele num: 117834
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3193_3194delTT
  hgvsp: ENSP00000380626.1:p.Phe1065LeufsTer248
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1356_627-1355delTT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3073_3074delTT
  hgvsp: ENSP00000458134.1:p.Phe1025LeufsTer?
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3193_3194delTT
  hgvsp: ENSP00000380625.2:p.Phe1065LeufsTer248
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3034_3035delTT
  hgvsp: ENSP00000409533.2:p.Phe1012LeufsTer?
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3247_3248delTT
  hgvsp: ENSP00000324510.5:p.Phe1083LeufsTer248
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3142_3143delTT
  hgvsp: ENSP00000407242.3:p.Phe1048LeufsTer?
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.628_629delTT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3058_3059delTT
  hgvsp: ENSP00000457644.1:p.Phe1020LeufsTer?
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe1083LeufsTer248
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: CTT
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

16-1398016-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398016
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398016
    reference: chr 16
allele count: 1
allele frequency: 8.49516625040352e-6
allele num: 117714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3078C>T
  hgvsp: ENST00000562208.1:c.3078C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3198C>T
  hgvsp: ENST00000397489.1:c.3198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3063C>T
  hgvsp: ENST00000568887.1:c.3063C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.633C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1351C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3147C>T
  hgvsp: ENST00000426824.3:c.3147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3039C>T
  hgvsp: ENST00000421665.2:c.3039C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3198C>T
  hgvsp: ENST00000397488.2:c.3198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3252C>T
  hgvsp: ENST00000324385.5:c.3252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
hgvs: c.3252C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

16-1398020-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398020
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398020
    reference: chr 16
allele count: 3
allele frequency: 2.550239722533918e-5
allele num: 117636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1347T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+2T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+2T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 8.25e1
  variant carriers: 0
hgvs: c.3254+2T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-1398023-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398023
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398023
    reference: chr 16
allele count: 1
allele frequency: 8.502678343678259e-6
allele num: 117610
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1344G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+5G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+5G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
hgvs: c.3254+5G>C
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS

16-1398025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398025
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398025
    reference: chr 16
allele count: 2
allele frequency: 1.701837985023826e-5
allele num: 117520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1342G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+7G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+7G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.75e1
  variant carriers: 2
hgvs: c.3254+7G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

16-1398026-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398026
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398026
    reference: chr 16
allele count: 2
allele frequency: 1.702330490441414e-5
allele num: 117486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+8T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1341T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+8T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
hgvs: c.3254+8T>C
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

16-1398029-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398029
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398029
    reference: chr 16
allele count: 1
allele frequency: 8.520209937972871e-6
allele num: 117368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1338T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+11T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+11T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

16-1398030-A-AAGCCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398030
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398036
    reference: chr 16
allele count: 39
allele frequency: 3.321523472099203e-4
allele num: 117416
alternate allele: AAGCCCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+27_3065+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+27_3080+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+27_3200+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+27_3149+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+27_3200+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+27_3254+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+27_635+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+27_3041+32dupCCCCAG
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/16-1398030-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398030
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398030
    reference: chr 16
allele count: 9
allele frequency: 7.665054166382776e-5
allele num: 117416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1337A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+12A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+12A>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10590
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

16-1398030-AAGCCCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398030
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398024
    reference: chr 16
allele count: 3
allele frequency: 2.555018055460925e-5
allele num: 117416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+27_3149+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+27_3200+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+27_3254+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+27_3200+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+27_3080+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+27_3065+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+27_3041+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+27_635+32delCCCCAG
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: AAGCCCC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

16-1398034-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398034
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398034
    reference: chr 16
allele count: 2
allele frequency: 1.712563364844499e-5
allele num: 116784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+16C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1333C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+16C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37778
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

16-1398044-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398044
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398044
    reference: chr 16
allele count: 1
allele frequency: 8.581775741036335e-6
allele num: 116526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1323G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

16-1398045-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398045
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398045
    reference: chr 16
allele count: 1
allele frequency: 8.597121683660311e-6
allele num: 116318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1322C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+27C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+27C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5945
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

16-1398050-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398050
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398050
    reference: chr 16
allele count: 1
allele frequency: 8.663559336717898e-6
allele num: 115426
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1317G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+32G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+32G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

16-1398051-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398051
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398051
    reference: chr 16
allele count: 20
allele frequency: 1.740401684708831e-4
allele num: 114916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1316G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+33G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6762
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9952
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-1398055-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398055
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398055
    reference: chr 16
allele count: 2
allele frequency: 1.756913454443234e-5
allele num: 113836
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1312C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+37C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+37C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

16-1398056-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398056
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398056
    reference: chr 16
allele count: 1
allele frequency: 8.900439681720277e-6
allele num: 112354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3200+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1311A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3065+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.635+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3041+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3080+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3149+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3200+38A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3254+38A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3420
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

16-1398062-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398062
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398062
    reference: chr 16
allele count: 1
allele frequency: 1.051193104173237e-5
allele num: 95130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1305C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-35C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27535
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

16-1398063-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398063
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398063
    reference: chr 16
allele count: 3
allele frequency: 3.685413134812413e-5
allele num: 81402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-34C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1304C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14876
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-1398064-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398064
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398064
    reference: chr 16
allele count: 1
allele frequency: 1.335327422283944e-5
allele num: 74888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1303G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-33G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16885
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

16-1398065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398065
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398065
    reference: chr 16
allele count: 6
allele frequency: 1.151277918489523e-4
allele num: 52116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1302G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-32G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-32G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2622
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

16-1398067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398067
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398067
    reference: chr 16
allele count: 2
allele frequency: 1.056300834477659e-4
allele num: 18934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-30G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1300G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17818
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

16-1398068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398068
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398068
    reference: chr 16
allele count: 10
allele frequency: 5.561735261401557e-4
allele num: 17980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1299C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-29C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

16-1398071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398071
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398071
    reference: chr 16
allele count: 5
allele frequency: 2.775310834813499e-4
allele num: 18016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1296G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-26G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

16-1398074-T-TCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398074
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398076
    reference: chr 16
allele count: 1
allele frequency: 5.56792873051225e-5
allele num: 17960
alternate allele: TCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-21_3066-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-21_3081-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-21_3201-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-21_3255-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-21_636-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-21_3042-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-21_3150-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-21_3201-20dupCC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1291_627-1290dupCC
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: T
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

16-1398077-C-CCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398077
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398079
    reference: chr 16
allele count: 106485
allele frequency: 9.142854689700175e-1
allele num: 116468
alternate allele: CCT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-20_636-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-20_3081-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-20_3201-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-20_3066-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-20_3201-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-20_3255-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-20_3042-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-20_3150-19insCT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1290_627-1289insCT
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 6.25e1
  variant carriers: 4167
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 3.25e1
  variant carriers: 4263
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.5e0
  variant carriers: 439
genotype depth: GenotypeDepth
  all individuals: 3287
  bin: 2.75e1
  variant carriers: 3149
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 1.75e1
  variant carriers: 2183
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 1.25e1
  variant carriers: 2041
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 7.75e1
  variant carriers: 1369
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 6.75e1
  variant carriers: 2990
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 2.25e1
  variant carriers: 2457
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 5.75e1
  variant carriers: 5389
genotype depth: GenotypeDepth
  all individuals: 6543
  bin: 4.25e1
  variant carriers: 6537
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 1321
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 559
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 4.75e1
  variant carriers: 6833
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 3.75e1
  variant carriers: 5570
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 324
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 5.25e1
  variant carriers: 6351
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 852
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 7.25e1
  variant carriers: 2026
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 712
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 3.25e1
  variant carriers: 537
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 1.75e1
  variant carriers: 375
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.25e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 2.75e1
  variant carriers: 496
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 5.25e1
  variant carriers: 587
num of homozygotes: 48771
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

16-1398085-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398085
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398085
    reference: chr 16
allele count: 1
allele frequency: 8.746457684637721e-6
allele num: 114332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-12C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1282C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-12C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37827
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

16-1398088-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398088
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398088
    reference: chr 16
allele count: 1
allele frequency: 8.706099493305009e-6
allele num: 114862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-9T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1279T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-9T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-1398092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398092
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398092
    reference: chr 16
allele count: 1
allele frequency: 8.719155985700584e-6
allele num: 114690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1275C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-5C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
hgvs: c.3255-5C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-1398093-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398093
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398093
    reference: chr 16
allele count: 2
allele frequency: 1.746114894360049e-5
allele num: 114540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1274G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-4G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28355
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
hgvs: c.3255-4G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/16-1398094-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398094
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398094
    reference: chr 16
allele count: 1
allele frequency: 8.720676724513823e-6
allele num: 114670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-3C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1273C>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
hgvs: c.3255-3C>A
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

16-1398095-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398095
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398095
    reference: chr 16
allele count: 1
allele frequency: 8.719612151651495e-6
allele num: 114684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1272A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-2A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 2.75e1
  variant carriers: 0
hgvs: c.3255-2A>G
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-1398096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398096
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398096
    reference: chr 16
allele count: 2
allele frequency: 1.744226609921161e-5
allele num: 114664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3081-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1271G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3201-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3255-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3042-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3201-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.636-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3066-1G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3150-1G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38711
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
hgvs: c.3255-1G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

16-1398100-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398100
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398100
    reference: chr 16
allele count: 6
allele frequency: 5.240998584930382e-5
allele num: 114482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3084C>T
  hgvsp: ENST00000562208.1:c.3084C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3204C>T
  hgvsp: ENST00000397488.2:c.3204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.639C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3258C>T
  hgvsp: ENST00000324385.5:c.3258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3045C>T
  hgvsp: ENST00000421665.2:c.3045C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3204C>T
  hgvsp: ENST00000397489.1:c.3204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3153C>T
  hgvsp: ENST00000426824.3:c.3153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1267C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3069C>T
  hgvsp: ENST00000568887.1:c.3069C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28373
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13026
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser1086Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-1398101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398101
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398101
    reference: chr 16
allele count: 1
allele frequency: 8.731184297838158e-6
allele num: 114532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3070G>A
  hgvsp: ENSP00000457644.1:p.Val1024Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3259G>A
  hgvsp: ENSP00000324510.5:p.Val1087Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.640G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1266G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3205G>A
  hgvsp: ENSP00000380626.1:p.Val1069Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3205G>A
  hgvsp: ENSP00000380625.2:p.Val1069Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3046G>A
  hgvsp: ENSP00000409533.2:p.Val1016Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3085G>A
  hgvsp: ENSP00000458134.1:p.Val1029Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3154G>A
  hgvsp: ENSP00000407242.3:p.Val1052Met
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val1087Met
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

16-1398109-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398109
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398109
    reference: chr 16
allele count: 1
allele frequency: 8.753348155669544e-6
allele num: 114242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3162C>T
  hgvsp: ENST00000426824.3:c.3162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3267C>T
  hgvsp: ENST00000324385.5:c.3267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3213C>T
  hgvsp: ENST00000397488.2:c.3213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3213C>T
  hgvsp: ENST00000397489.1:c.3213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.648C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1258C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3054C>T
  hgvsp: ENST00000421665.2:c.3054C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3093C>T
  hgvsp: ENST00000562208.1:c.3093C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3078C>T
  hgvsp: ENST00000568887.1:c.3078C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala1089Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

16-1398110-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398110
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398110
    reference: chr 16
allele count: 1
allele frequency: 8.745386808458538e-6
allele num: 114346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3214G>C
  hgvsp: ENSP00000380626.1:p.Glu1072Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3079G>C
  hgvsp: ENSP00000457644.1:p.Glu1027Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3055G>C
  hgvsp: ENSP00000409533.2:p.Glu1019Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.649G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3214G>C
  hgvsp: ENSP00000380625.2:p.Glu1072Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3268G>C
  hgvsp: ENSP00000324510.5:p.Glu1090Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3094G>C
  hgvsp: ENSP00000458134.1:p.Glu1032Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3163G>C
  hgvsp: ENSP00000407242.3:p.Glu1055Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1257G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu1090Gln
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-1398113-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398113
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398113
    reference: chr 16
allele count: 1
allele frequency: 8.749365670988854e-6
allele num: 114294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3097G>A
  hgvsp: ENSP00000458134.1:p.Ala1033Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3217G>A
  hgvsp: ENSP00000380625.2:p.Ala1073Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3082G>A
  hgvsp: ENSP00000457644.1:p.Ala1028Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3058G>A
  hgvsp: ENSP00000409533.2:p.Ala1020Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3271G>A
  hgvsp: ENSP00000324510.5:p.Ala1091Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1254G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3217G>A
  hgvsp: ENSP00000380626.1:p.Ala1073Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3166G>A
  hgvsp: ENSP00000407242.3:p.Ala1056Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.652G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala1091Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-1398114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398114
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398114
    reference: chr 16
allele count: 9
allele frequency: 7.87429131378176e-5
allele num: 114296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.653C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3218C>T
  hgvsp: ENSP00000380626.1:p.Ala1073Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3167C>T
  hgvsp: ENSP00000407242.3:p.Ala1056Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3218C>T
  hgvsp: ENSP00000380625.2:p.Ala1073Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3059C>T
  hgvsp: ENSP00000409533.2:p.Ala1020Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3272C>T
  hgvsp: ENSP00000324510.5:p.Ala1091Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3083C>T
  hgvsp: ENSP00000457644.1:p.Ala1028Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3098C>T
  hgvsp: ENSP00000458134.1:p.Ala1033Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1253C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9970
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28737
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala1091Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff

16-1398115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398115
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398115
    reference: chr 16
allele count: 2
allele frequency: 1.748710326134476e-5
allele num: 114370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3060G>A
  hgvsp: ENST00000421665.2:c.3060G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3219G>A
  hgvsp: ENST00000397488.2:c.3219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3273G>A
  hgvsp: ENST00000324385.5:c.3273G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1252G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.654G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3084G>A
  hgvsp: ENST00000568887.1:c.3084G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3168G>A
  hgvsp: ENST00000426824.3:c.3168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3219G>A
  hgvsp: ENST00000397489.1:c.3219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3099G>A
  hgvsp: ENST00000562208.1:c.3099G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28794
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39653
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala1091Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

16-1398117-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1398117
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1398117
    reference: chr 16
allele count: 1
allele frequency: 8.755647392568207e-6
allele num: 114212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.3086G>T
  hgvsp: ENSP00000457644.1:p.Cys1029Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.3101G>T
  hgvsp: ENSP00000458134.1:p.Cys1034Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.3221G>T
  hgvsp: ENSP00000380626.1:p.Cys1074Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.3062G>T
  hgvsp: ENSP00000409533.2:p.Cys1021Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.3170G>T
  hgvsp: ENSP00000407242.3:p.Cys1057Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457947
  ensembl transcript: ENST00000566162
  gene symbol: BAIAP3
  hgvsc: ENST00000566162.1:c.627-1250G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.3221G>T
  hgvsp: ENSP00000380625.2:p.Cys1074Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.3275G>T
  hgvsp: ENSP00000324510.5:p.Cys1092Phe
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000566389
  gene symbol: BAIAP3
  hgvsc: ENST00000566389.1:n.656G>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys1092Phe
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10693
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584233706156332e-5
allele num: 63122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.958e0

VQSLOD
type: SiteQuality
SIO_000300: -1.272e0

MQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.858e1

DP
type: SiteQuality
SIO_000300: 2.214944e6

QD
type: SiteQuality
SIO_000300: 1.3e1

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41030
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582729258333069e-5
allele num: 63182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 1.1356e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.387e0

DP
type: SiteQuality
SIO_000300: 2.216222e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10713
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41233
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576491360827343e-5
allele num: 63432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.484e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 1.36e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 2.220084e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.477e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10747
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63646
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.610057421263268e-4
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.031991744066047e-4
allele num: 9690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.224163e6

FS
type: SiteQuality
SIO_000300: 1.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-3

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.077e0

VQSLOD
type: SiteQuality
SIO_000300: -1.569e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10742
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.712239256094496e-5
allele num: 63664
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.463154060944518e-4
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.030502885408079e-4
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.225299e6

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.187e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63840
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.294e1

DP
type: SiteQuality
SIO_000300: 2.226679e6

MQRankSum
type: SiteQuality
SIO_000300: -1.491e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.826e0

MQ
type: SiteQuality
SIO_000300: 5.745e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.971e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.306e0

VQSLOD
type: SiteQuality
SIO_000300: -3.092e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565827383189277e-5
allele num: 63864
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.88e1

FS
type: SiteQuality
SIO_000300: 1.892e0

QD
type: SiteQuality
SIO_000300: 1.074e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.159e0

DP
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SIO_000300: 2.226932e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -5.328000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.125879153511925e-5
allele num: 63982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740341106856944e-4
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

FS
type: SiteQuality
SIO_000300: 2.444e0

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

BaseQRankSum
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SIO_000300: 4.45e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

DP
type: SiteQuality
SIO_000300: 2.228842e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.177e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821272462360369e-4
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740341106856944e-4
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.093613298337708e-4
allele num: 64008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.26e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e-1

FS
type: SiteQuality
SIO_000300: 1.747e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

DP
type: SiteQuality
SIO_000300: 2.229589e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.070908207867897e-5
allele num: 16472
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.229589e6

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.747e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 5.919e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 1.019783805833163e-4
allele num: 9806
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64038
num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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MQ
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SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 8.159999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.04e-1

InbreedingCoeff
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SIO_000300: 1.7e-3

ReadPosRankSum
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MQRankSum
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SIO_000300: -5.35e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.120222159817779e-5
allele num: 64098
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.89e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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FS
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64142
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214034235765449e-4
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

DP
type: SiteQuality
SIO_000300: 2.229192e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.49e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.13e1

GenotypeQuality
all individuals: 608
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2281
bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183992422448496e-4
allele num: 8446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.126e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

FS
type: SiteQuality
SIO_000300: 1.803e0

QD
type: SiteQuality
SIO_000300: 6.51e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: -1.307e0

DP
type: SiteQuality
SIO_000300: 2.228572e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.741856819369448e-4
allele num: 11482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64110
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.84e0

DP
type: SiteQuality
SIO_000300: 2.228826e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
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SIO_000300: 7.228e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.226e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.262e1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559673092519808e-5
allele num: 64116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.566e0

MQ
type: SiteQuality
SIO_000300: 5.894e1

DP
type: SiteQuality
SIO_000300: 2.227757e6

QD
type: SiteQuality
SIO_000300: 9.85e0

MQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.569e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559575795383656e-5
allele num: 64120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

QD
type: SiteQuality
SIO_000300: 1.364e1

FS
type: SiteQuality
SIO_000300: 5.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

DP
type: SiteQuality
SIO_000300: 2.227999e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.119151590767312e-5
allele num: 64120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

QD
type: SiteQuality
SIO_000300: 1.364e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 5.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

DP
type: SiteQuality
SIO_000300: 2.227999e6

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.235774639104543e-5
allele num: 64146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 1.219e1

FS
type: SiteQuality
SIO_000300: 3.329e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

DP
type: SiteQuality
SIO_000300: 2.228608e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558409175913228e-5
allele num: 64168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.612785229054172e-4
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

DP
type: SiteQuality
SIO_000300: 2.22849e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.338853026475816e-4
allele num: 64134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008471157724889e-4
allele num: 9916
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.229028e6

FS
type: SiteQuality
SIO_000300: 6.324e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.008e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 600
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 167
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.55802069051477e-5
allele num: 64184
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9922
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.648e0

InbreedingCoeff
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SIO_000300: 1.0e-4

MQRankSum
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SIO_000300: 1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

FS
type: SiteQuality
SIO_000300: 3.313e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.062e0

DP
type: SiteQuality
SIO_000300: 2.225778e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.007455168245013e-4
allele num: 9926
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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SIO_000300: 1.73e0

VQSLOD
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SIO_000300: 1.24e-1

ClippingRankSum
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SIO_000300: -5.33e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

DP
type: SiteQuality
SIO_000300: 2.223831e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.186239620403321e-4
allele num: 8430
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64178
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 1.73e0

ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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SIO_000300: 5.899e1

QD
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ClippingRankSum
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SIO_000300: -5.33e-1

DP
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SIO_000300: 2.223831e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559283976797854e-5
allele num: 64132
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.89e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.168e0

DP
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SIO_000300: 2.222278e6

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.288e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008674601573532e-4
allele num: 9914
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.118081756103645e-5
allele num: 64142
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -1.142e0

DP
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

FS
type: SiteQuality
SIO_000300: 1.116e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64142
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 1.188495364868077e-4
allele num: 8414
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6592
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BaseQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
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FS
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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Other
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Latino
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African
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European (Non-Finnish)
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South Asian
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VQSLOD
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.719916288803627e-5
allele num: 11468
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 2.2e-3

QD
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DP
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SIO_000300: 2.219765e6

MQ
type: SiteQuality
SIO_000300: 5.873e1

VQSLOD
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SIO_000300: 3.31e0

FS
type: SiteQuality
SIO_000300: 5.620000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.038e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.560744162816831e-5
allele num: 64072
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.661e0

QD
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 2.973e0

BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.216398e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64008
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.033980582524272e-4
allele num: 9888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.21407e6

BaseQRankSum
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SIO_000300: -2.667e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

VQSLOD
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SIO_000300: 4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.765e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562793023691942e-5
allele num: 63988
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.488e1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
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SIO_000300: -1.291e0

DP
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SIO_000300: 2.21119e6

VQSLOD
type: SiteQuality
SIO_000300: -7.86e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 4.404e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.564064064064064e-5
allele num: 63936
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.063e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 2.209801e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

BaseQRankSum
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SIO_000300: -4.812e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.436e0

FS
type: SiteQuality
SIO_000300: 1.4062e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.129792494757598e-5
allele num: 63902
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.908e1

MQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.415e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63848
num of homozygotes: 0

European (Finnish)
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allele count: 0
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allele num: 6592
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African
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allele frequency: 1.015434606011373e-4
allele num: 9848
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Latino
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East Asian
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South Asian
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Other
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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FS
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 2.030044660982542e-4
allele num: 9852
num of homozygotes: 0

East Asian
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allele num: 8392
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Latino
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allele num: 11456
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European (Finnish)
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South Asian
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allele frequency: 1.893014167073766e-3
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Other
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European (Non-Finnish)
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allele num: 63870
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.072449952335558e-3
allele num: 8392
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63870
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South Asian
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allele num: 16376
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European (Finnish)
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
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VQSLOD
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DP
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SIO_000300: 2.204938e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

MQ
type: SiteQuality
SIO_000300: 5.545e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3677
bin: 2.25e1
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GenotypeQuality
all individuals: 10590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565680288085173e-5
allele num: 63870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.221299462628236e-4
allele num: 16376
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

DP
type: SiteQuality
SIO_000300: 2.204938e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.545e1

MQRankSum
type: SiteQuality
SIO_000300: -2.503e0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

QD
type: SiteQuality
SIO_000300: 9.06e0

GenotypeQuality
all individuals: 559
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10166
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variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.151889557789895e-5
allele num: 63454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.153e0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.161e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.162e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 2.197776e6

GenotypeQuality
all individuals: 440
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5529
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10130
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.200192030724916e-4
allele num: 8332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.394e1

MQ
type: SiteQuality
SIO_000300: 5.914e1

DP
type: SiteQuality
SIO_000300: 2.193763e6

VQSLOD
type: SiteQuality
SIO_000300: -2.288e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 1.926e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.676e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
all individuals: 1585
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 555
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 502
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 394
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variant carriers: 1

GenotypeQuality
all individuals: 10094
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variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.200480192076831e-4
allele num: 8330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.702e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQ
type: SiteQuality
SIO_000300: 5.917e1

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

FS
type: SiteQuality
SIO_000300: 2.746e0

QD
type: SiteQuality
SIO_000300: 1.501e1

DP
type: SiteQuality
SIO_000300: 2.193145e6

GenotypeQuality
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 415
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GenotypeQuality
all individuals: 1990
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 9616
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33713
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59494720724744e-5
allele num: 62698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.198757e6

FS
type: SiteQuality
SIO_000300: 2.198e0

MQ
type: SiteQuality
SIO_000300: 5.862e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.092e0

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
all individuals: 534
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
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variant carriers: 0

GenotypeQuality
all individuals: 9201
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variant carriers: 0

GenotypeQuality
all individuals: 195
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variant carriers: 0

GenotypeQuality
all individuals: 2272
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GenotypeQuality
all individuals: 32023
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 146
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GenotypeQuality
all individuals: 398
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variant carriers: 20

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.60199929512031e-5
allele num: 62422
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.58965663416702e-3
allele num: 9436
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.526093088857546e-4
allele num: 11344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.208677e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.464e0

MQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

FS
type: SiteQuality
SIO_000300: 1.235e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.54e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

QD
type: SiteQuality
SIO_000300: 1.279e1

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.616187736367456e-5
allele num: 61874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.078515962036238e-4
allele num: 9272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.411e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.224e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.259e0

FS
type: SiteQuality
SIO_000300: 2.808e0

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 3.032e1

DP
type: SiteQuality
SIO_000300: 2.24655e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 9.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1418
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18050
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variant carriers: 0

GenotypeQuality
all individuals: 51
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GenotypeQuality
all individuals: 1289
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GenotypeQuality
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GenotypeQuality
all individuals: 6665
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61134
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.098177026136613e-4
allele num: 9106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15456
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.06e-1

QD
type: SiteQuality
SIO_000300: 1.774e1

FS
type: SiteQuality
SIO_000300: 5.922e0

MQ
type: SiteQuality
SIO_000300: 5.725e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.801e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

DP
type: SiteQuality
SIO_000300: 2.319276e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.296e0

GenotypeQuality
all individuals: 6146
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 236
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3761
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GenotypeQuality
all individuals: 821
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
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GenotypeQuality
all individuals: 64
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GenotypeQuality
all individuals: 1577
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variant carriers: 0

GenotypeQuality
all individuals: 428
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GenotypeQuality
all individuals: 10133
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GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 487
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GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.869508319312021e-5
allele num: 53490
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.458e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.093e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

MQ
type: SiteQuality
SIO_000300: 5.914e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

DP
type: SiteQuality
SIO_000300: 2.702819e6

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 376
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.40970857191693e-5
allele num: 46804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9224
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.785e1

VQSLOD
type: SiteQuality
SIO_000300: -1.253e0

FS
type: SiteQuality
SIO_000300: 8.441000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -7.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.418e1

DP
type: SiteQuality
SIO_000300: 2.742216e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeQuality
all individuals: 20632
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variant carriers: 0

GenotypeQuality
all individuals: 1037
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 25
bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.29684413615692e-5
allele num: 43538
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

FS
type: SiteQuality
SIO_000300: 9.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.788e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

DP
type: SiteQuality
SIO_000300: 2.747188e6

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeQuality
all individuals: 335
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22213
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GenotypeQuality
all individuals: 402
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 377
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variant carriers: 6

GenotypeQuality
all individuals: 112
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GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 403
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variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.128911138923655e-4
allele num: 3196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.585992514115333e-4
allele num: 31526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3720
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.622e1

DP
type: SiteQuality
SIO_000300: 2.744031e6

FS
type: SiteQuality
SIO_000300: 8.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.93e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 1.373e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.43e0

VQSLOD
type: SiteQuality
SIO_000300: -5.14e-1

GenotypeQuality
all individuals: 498
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
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GenotypeQuality
all individuals: 563
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 306
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GenotypeQuality
all individuals: 998
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variant carriers: 0

GenotypeQuality
all individuals: 597
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GenotypeQuality
all individuals: 279
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GenotypeQuality
all individuals: 3010
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variant carriers: 0

GenotypeQuality
all individuals: 1850
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variant carriers: 0

GenotypeQuality
all individuals: 373
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variant carriers: 2

GenotypeQuality
all individuals: 3284
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 936
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.7825311942959e-3
allele num: 1122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2788
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.414e0

MQ
type: SiteQuality
SIO_000300: 5.54e1

FS
type: SiteQuality
SIO_000300: 2.754e0

DP
type: SiteQuality
SIO_000300: 2.658464e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.36e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.85e0

QD
type: SiteQuality
SIO_000300: 1.339e1

GenotypeQuality
all individuals: 385
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
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variant carriers: 0

GenotypeQuality
all individuals: 2130
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GenotypeQuality
all individuals: 583
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variant carriers: 0

GenotypeQuality
all individuals: 369
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GenotypeQuality
all individuals: 726
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GenotypeQuality
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GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 769
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variant carriers: 0

GenotypeQuality
all individuals: 647
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variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1042
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 2.945508100147275e-3
allele num: 2716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.092050209205021e-3
allele num: 956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12240
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

QD
type: SiteQuality
SIO_000300: 2.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -2.032e0

FS
type: SiteQuality
SIO_000300: 5.182e0

DP
type: SiteQuality
SIO_000300: 2.57426e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

GenotypeQuality
all individuals: 256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.25e1
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GenotypeQuality
all individuals: 789
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variant carriers: 0

GenotypeQuality
all individuals: 222
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GenotypeQuality
all individuals: 2672
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variant carriers: 0

GenotypeQuality
all individuals: 236
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GenotypeQuality
all individuals: 2018
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GenotypeQuality
all individuals: 982
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GenotypeQuality
all individuals: 725
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GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 633
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GenotypeQuality
all individuals: 277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 958
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 4.081632653061225e-4
allele num: 12250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1052
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.576091e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.889e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 1.334e1

MQRankSum
type: SiteQuality
SIO_000300: -1.736e0

VQSLOD
type: SiteQuality
SIO_000300: -8.766e-1

FS
type: SiteQuality
SIO_000300: 1.438e0

MQ
type: SiteQuality
SIO_000300: 5.538e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.64e-2

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 3.25e1
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GenotypeQuality
all individuals: 182
bin: 9.25e1
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 630
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GenotypeQuality
all individuals: 2724
bin: 6.25e1
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GenotypeQuality
all individuals: 232
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GenotypeQuality
all individuals: 373
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GenotypeQuality
all individuals: 771
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.208832703989493e-5
allele num: 12182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1056
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.581582e6

MQ
type: SiteQuality
SIO_000300: 5.818e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.004e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

MQRankSum
type: SiteQuality
SIO_000300: -1.386e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-2

GenotypeQuality
all individuals: 746
bin: 6.75e1
variant carriers: 708

GenotypeQuality
all individuals: 1236
bin: 9.25e1
variant carriers: 1236

GenotypeQuality
all individuals: 614
bin: 3.75e1
variant carriers: 603

GenotypeQuality
all individuals: 587
bin: 4.75e1
variant carriers: 586

GenotypeQuality
all individuals: 231
bin: 7.5e0
variant carriers: 206

GenotypeQuality
all individuals: 493
bin: 2.25e1
variant carriers: 463

GenotypeQuality
all individuals: 895
bin: 7.75e1
variant carriers: 890

GenotypeQuality
all individuals: 1049
bin: 6.25e1
variant carriers: 650

GenotypeQuality
all individuals: 47753
bin: 9.75e1
variant carriers: 47753

GenotypeQuality
all individuals: 690
bin: 4.25e1
variant carriers: 685

GenotypeQuality
all individuals: 699
bin: 5.75e1
variant carriers: 692

GenotypeQuality
all individuals: 952
bin: 8.25e1
variant carriers: 949

GenotypeQuality
all individuals: 783
bin: 7.25e1
variant carriers: 779

GenotypeQuality
all individuals: 993
bin: 8.75e1
variant carriers: 992

Other
type: Population
allele count: 787
allele frequency: 9.151162790697674e-1
allele num: 860
num of homozygotes: 361

Latino
type: Population
allele count: 10875
allele frequency: 9.547848990342406e-1
allele num: 11390
num of homozygotes: 5200

African
type: Population
allele count: 9054
allele frequency: 9.374611720853179e-1
allele num: 9658
num of homozygotes: 4251

East Asian
type: Population
allele count: 8358
allele frequency: 9.990437485058571e-1
allele num: 8366
num of homozygotes: 4175

South Asian
type: Population
allele count: 14835
allele frequency: 9.078947368421053e-1
allele num: 16340
num of homozygotes: 6758

European (Finnish)
type: Population
allele count: 6064
allele frequency: 9.275007647598654e-1
allele num: 6538
num of homozygotes: 2807

European (Non-Finnish)
type: Population
allele count: 56512
allele frequency: 8.925390106766062e-1
allele num: 63316
num of homozygotes: 25219

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

DP
type: SiteQuality
SIO_000300: 2.739289e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.231e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.87e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

GenotypeQuality
all individuals: 9030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 1.75e1
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GenotypeQuality
all individuals: 1126
bin: 7.5e0
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GenotypeQuality
all individuals: 290
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variant carriers: 1

GenotypeQuality
all individuals: 728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 2316
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613267512018843e-5
allele num: 61986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.802e0

MQ
type: SiteQuality
SIO_000300: 5.527e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 1.53626e6

FS
type: SiteQuality
SIO_000300: 5.935e0

VQSLOD
type: SiteQuality
SIO_000300: -1.492e0

QD
type: SiteQuality
SIO_000300: 1.177e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.203659123736158e-4
allele num: 8308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.531653e6

VQSLOD
type: SiteQuality
SIO_000300: -2.645e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.117e1

MQ
type: SiteQuality
SIO_000300: 5.701e1

MQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.786e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.605239501733659e-5
allele num: 62296
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.53066e6

MQRankSum
type: SiteQuality
SIO_000300: -5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

FS
type: SiteQuality
SIO_000300: 5.593e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.196e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.076889941847943e-4
allele num: 9286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607510288065844e-5
allele num: 62208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.529474e6

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 1.255e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.302e0

VQSLOD
type: SiteQuality
SIO_000300: -2.444e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.38e-1

QD
type: SiteQuality
SIO_000300: 2.151e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62296
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.147037128104254e-5
allele num: 16268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

MQ
type: SiteQuality
SIO_000300: 5.81e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.733e0

FS
type: SiteQuality
SIO_000300: 6.877e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.448e0

DP
type: SiteQuality
SIO_000300: 1.528399e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.605239501733659e-5
allele num: 62296
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.503e1

MQRankSum
type: SiteQuality
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 6.23e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.152389151958674e-4
allele num: 9292
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.926e1

DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.68e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.574307304785894e-4
allele num: 6352
num of homozygotes: 0

African
type: Population
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.432729728860441e-5
allele num: 62182
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele count: 0
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South Asian
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allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.396e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8855
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GenotypeQuality
all individuals: 278
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.606528933586094e-5
allele num: 62246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 6.022e1

VQSLOD
type: SiteQuality
SIO_000300: -6.569e-1

QD
type: SiteQuality
SIO_000300: 7.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.44e-1

DP
type: SiteQuality
SIO_000300: 1.526333e6

GenotypeQuality
all individuals: 250
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 398
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610980442697426e-5
allele num: 62074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.304e0

MQ
type: SiteQuality
SIO_000300: 6.019e1

VQSLOD
type: SiteQuality
SIO_000300: -3.701e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

FS
type: SiteQuality
SIO_000300: 2.053e0

QD
type: SiteQuality
SIO_000300: 2.102e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.525424e6

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.609372988283765e-5
allele num: 62136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

MQ
type: SiteQuality
SIO_000300: 6.027e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.7e0

DP
type: SiteQuality
SIO_000300: 1.526327e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

QD
type: SiteQuality
SIO_000300: 9.2e-1

GenotypeQuality
all individuals: 1081
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39172
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.203369434416366e-4
allele num: 8310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62108
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.216e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.965e0

VQSLOD
type: SiteQuality
SIO_000300: -1.38e0

MQ
type: SiteQuality
SIO_000300: 5.76e1

MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

DP
type: SiteQuality
SIO_000300: 1.52543e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.95e-1

GenotypeQuality
all individuals: 1086
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 700
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
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variant carriers: 0

GenotypeQuality
all individuals: 39267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.203369434416366e-4
allele num: 8310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.146281499692685e-5
allele num: 16270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.660280148124295e-5
allele num: 62110
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.084128360797918e-4
allele num: 9224
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 1.526031e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.63e-1

QD
type: SiteQuality
SIO_000300: 1.07e1

FS
type: SiteQuality
SIO_000300: 1.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 237
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
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variant carriers: 0

GenotypeQuality
all individuals: 8677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
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variant carriers: 0

GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 85
bin: 5.75e1
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GenotypeQuality
all individuals: 446
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.217813817292531e-5
allele num: 62154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.526417e6

FS
type: SiteQuality
SIO_000300: 1.0696e1

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

MQ
type: SiteQuality
SIO_000300: 6.025e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.29e-2

QD
type: SiteQuality
SIO_000300: 1.236e1