19-49661109-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661109
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661109
    reference: chr 19
allele count: 1
allele frequency: 6.705109293281481e-5
allele num: 14914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.-15G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.-15G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-344G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.-15G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.-15G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.61G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.-15G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.-15G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.21G>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17073
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/19-49661111-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661111
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661112
    reference: chr 19
allele count: 3
allele frequency: 1.993885418051309e-4
allele num: 15046
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-342_-341insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.23_24insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.-13_-12insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.-13_-12insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.-13_-12insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.63_64insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.-13_-12insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.-13_-12insA
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.-13_-12insA
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-49661112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661112
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661112
    reference: chr 19
allele count: 4586
allele frequency: 2.937483986676915e-1
allele num: 15612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.-12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.-12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-341G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.24G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.64G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 2.25e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.25e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 305
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 375
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 7.5e0
  variant carriers: 973
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 16861
  bin: 2.5e0
  variant carriers: 1293
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.75e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.25e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 2.75e1
  variant carriers: 222
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.75e1
  variant carriers: 267
genotype quality: GenotypeQuality
  all individuals: 4647
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 50
num of homozygotes: 718
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

19-49661114-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661114
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661114
    reference: chr 19
allele count: 3
allele frequency: 1.998933901918977e-4
allele num: 15008
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.-10C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.-10C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.-10C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.66C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.-10C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.-10C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.26C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.-10C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-339C>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20948
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

19-49661129-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661129
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661129
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 15768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.6G>A
  hgvsp: ENST00000598691.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.6G>A
  hgvsp: ENST00000598697.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.6G>A
  hgvsp: ENST00000598502.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.6G>A
  hgvsp: ENST00000252826.5:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.6G>A
  hgvsp: ENST00000595519.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-324G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.81G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.41G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.6G>A
  hgvsp: ENST00000427978.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19496
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val2Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

19-49661153-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661153
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661153
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 16590
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+6C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+6C>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22973
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
hgvs: c.24+6C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-49661155-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661155
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661155
    reference: chr 19
allele count: 1
allele frequency: 6.007449237053947e-5
allele num: 16646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+8C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+8C>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
hgvs: c.24+8C>G
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

19-49661157-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661157
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661157
    reference: chr 19
allele count: 1
allele frequency: 5.99592277251469e-5
allele num: 16678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+10G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+10G>C
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

19-49661178-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661178
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661178
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 16848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+31C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+31C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25715
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

19-49661194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661194
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661194
    reference: chr 19
allele count: 1
allele frequency: 5.926979611190138e-5
allele num: 16872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+47G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+47G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

19-49661195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661195
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661195
    reference: chr 19
allele count: 1
allele frequency: 5.949547834364588e-5
allele num: 16808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+48C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+48C>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23762
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2455
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

19-49661196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661196
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661196
    reference: chr 19
allele count: 1
allele frequency: 5.934718100890208e-5
allele num: 16850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.24+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.24+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.24+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.24+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.59+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-306+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.24+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.99+49C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.24+49C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-49661400-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661400
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661400
    reference: chr 19
allele count: 2
allele frequency: 1.650083329208125e-5
allele num: 121206
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-49G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-49G>C
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23745
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51586
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

19-49661406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661406
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661406
    reference: chr 19
allele count: 2
allele frequency: 1.649457328538911e-5
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-43C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-43C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23746
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

19-49661408-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661408
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661408
    reference: chr 19
allele count: 5
allele frequency: 4.123235255310727e-5
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-41T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-41T>C
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23747
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

19-49661413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661413
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661413
    reference: chr 19
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-36C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-36C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23747
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-49661414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661414
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661414
    reference: chr 19
allele count: 5
allele frequency: 4.122963256151461e-5
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-35C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-35C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23747
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3254
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

19-49661439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661439
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661439
    reference: chr 19
allele count: 8
allele frequency: 6.59467480009892e-5
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-10C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-10C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23752
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-49661443-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661443
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661443
    reference: chr 19
allele count: 4
allele frequency: 3.297174321606383e-5
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-6C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-6C>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23752
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: c.25-6C>A
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

19-49661443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661443
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661443
    reference: chr 19
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25-6C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25-6C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: c.25-6C>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP

19-49661449-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661449
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661449
    reference: chr 19
allele count: 2
allele frequency: 1.648559982854976e-5
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.25A>G
  hgvsp: ENSP00000470229.1:p.Ser9Gly
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.100A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.25A>G
  hgvsp: ENSP00000469893.1:p.Ser9Gly
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.25A>G
  hgvsp: ENSP00000473231.1:p.Ser9Gly
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.25A>G
  hgvsp: ENSP00000468989.1:p.Ser9Gly
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-305A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.25A>G
  hgvsp: ENSP00000407492.1:p.Ser9Gly
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.25A>G
  hgvsp: ENSP00000252826.4:p.Ser9Gly
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.60A>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23752
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser9Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-49661459-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661459
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661459
    reference: chr 19
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.35C>G
  hgvsp: ENSP00000468989.1:p.Pro12Arg
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-295C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.110C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.35C>G
  hgvsp: ENSP00000407492.1:p.Pro12Arg
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.70C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.35C>G
  hgvsp: ENSP00000469893.1:p.Pro12Arg
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.35C>G
  hgvsp: ENSP00000252826.4:p.Pro12Arg
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.35C>G
  hgvsp: ENSP00000473231.1:p.Pro12Arg
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.35C>G
  hgvsp: ENSP00000470229.1:p.Pro12Arg
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro12Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-49661462-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661462
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661462
    reference: chr 19
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.73A>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.38A>C
  hgvsp: ENSP00000252826.4:p.Lys13Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.38A>C
  hgvsp: ENSP00000470229.1:p.Lys13Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.38A>C
  hgvsp: ENSP00000469893.1:p.Lys13Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.113A>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.38A>C
  hgvsp: ENSP00000473231.1:p.Lys13Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.38A>C
  hgvsp: ENSP00000407492.1:p.Lys13Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-292A>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.38A>C
  hgvsp: ENSP00000468989.1:p.Lys13Thr
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys13Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

19-49661472-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661472
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661472
    reference: chr 19
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.48G>C
  hgvsp: ENSP00000473231.1:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.48G>C
  hgvsp: ENSP00000468989.1:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.48G>C
  hgvsp: ENSP00000469893.1:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.48G>C
  hgvsp: ENSP00000470229.1:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-282G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.48G>C
  hgvsp: ENSP00000407492.1:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.83G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.48G>C
  hgvsp: ENSP00000252826.4:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.123G>C
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23753
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51641
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys16Asn
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

19-49661493-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661493
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661493
    reference: chr 19
allele count: 3
allele frequency: 2.475901228047009e-5
allele num: 121168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-261C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.69C>G
  hgvsp: ENSP00000469893.1:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.69C>G
  hgvsp: ENSP00000252826.4:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.69C>G
  hgvsp: ENSP00000470229.1:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.69C>G
  hgvsp: ENSP00000407492.1:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.144C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.69C>G
  hgvsp: ENSP00000473231.1:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.69C>G
  hgvsp: ENSP00000468989.1:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.104C>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23756
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe23Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-49661505-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661505
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661505
    reference: chr 19
allele count: 3
allele frequency: 2.479420807299415e-5
allele num: 120996
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.81C>T
  hgvsp: ENST00000252826.5:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.81C>T
  hgvsp: ENST00000427978.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.81C>T
  hgvsp: ENST00000595519.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.156C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-249C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.81C>T
  hgvsp: ENST00000598502.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.81C>T
  hgvsp: ENST00000598691.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.81C>T
  hgvsp: ENST00000598697.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.116C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23755
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51640
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser27Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-49661513-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661513
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661513
    reference: chr 19
allele count: 1
allele frequency: 8.272119647938589e-6
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.89C>T
  hgvsp: ENSP00000468989.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.89C>T
  hgvsp: ENSP00000469893.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.89C>T
  hgvsp: ENSP00000470229.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.89C>T
  hgvsp: ENSP00000473231.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.164C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.89C>T
  hgvsp: ENSP00000252826.4:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.124C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.89C>T
  hgvsp: ENSP00000407492.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-241C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro30Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/19-49661527-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661527
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661527
    reference: chr 19
allele count: 8
allele frequency: 6.627673852169734e-5
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+11C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.178C>A
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23753
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-49661528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661528
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661528
    reference: chr 19
allele count: 29
allele frequency: 2.40289009677847e-4
allele num: 120688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.179G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+12G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+12G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23766
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-49661528-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661528
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661528
    reference: chr 19
allele count: 3
allele frequency: 2.485748375977728e-5
allele num: 120688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.179G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+12G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+12G>C
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23766
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51638
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

19-49661529-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661529
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661529
    reference: chr 19
allele count: 3
allele frequency: 2.485830764641543e-5
allele num: 120684
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.180C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+13C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23756
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

19-49661530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661530
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661530
    reference: chr 19
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.181C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+14C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+14C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23756
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51637
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

19-49661531-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661531
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661531
    reference: chr 19
allele count: 1
allele frequency: 8.290636555074699e-6
allele num: 120618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.182C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+15C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+15C>G
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23757
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-49661532-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661532
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661531
    reference: chr 19
allele count: 1
allele frequency: 8.290636555074699e-6
allele num: 120618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.184delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+17delT
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+17delT
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: CT
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-49661533-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661533
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661533
    reference: chr 19
allele count: 2
allele frequency: 1.658402295228776e-5
allele num: 120598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.184T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+17T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+17T>C
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23759
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

19-49661534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661534
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661534
    reference: chr 19
allele count: 1
allele frequency: 8.292836647703714e-6
allele num: 120586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.185G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+18G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+18G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23760
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

19-49661536-ACTGACCCCAGAGGGTCCGCGGCCCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661536
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661511
    reference: chr 19
allele count: 7
allele frequency: 5.807200929152149e-5
allele num: 120540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23761
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: ACTGACCCCAGAGGGTCCGCGGCCCG
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-49661538-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661538
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661538
    reference: chr 19
allele count: 1
allele frequency: 8.298892927683448e-6
allele num: 120498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+22T>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.189T>A
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23757
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-49661541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661541
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661541
    reference: chr 19
allele count: 2
allele frequency: 1.660798511924533e-5
allele num: 120424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.192C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+25C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+25C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23756
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51632
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

19-49661546-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661546
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661546
    reference: chr 19
allele count: 1
allele frequency: 8.314763694415805e-6
allele num: 120268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.197G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+30G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+30G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23759
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51634
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

19-49661547-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661547
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661547
    reference: chr 19
allele count: 21717
allele frequency: 1.806618527884999e-1
allele num: 120208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.198A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+31A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+31A>G
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 7.25e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 6.75e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.75e1
  variant carriers: 275
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 5.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 3.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.75e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 8.75e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 8.25e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.75e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.75e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 31278
  bin: 9.75e1
  variant carriers: 15762
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 9.25e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 4.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 6.25e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 8.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 17
num of homozygotes: 2329
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

19-49661547-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661547
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661547
    reference: chr 19
allele count: 3
allele frequency: 2.495674164781046e-5
allele num: 120208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.198A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+31A>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+31A>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31278
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53657
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

19-49661553-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661553
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661553
    reference: chr 19
allele count: 1
allele frequency: 8.339170752860335e-6
allele num: 119916
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.204C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+37C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+37C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25823
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-49661554-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661554
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661554
    reference: chr 19
allele count: 3
allele frequency: 2.502794787512722e-5
allele num: 119866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.205G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+38G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+38G>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25838
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

19-49661556-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661556
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661556
    reference: chr 19
allele count: 1
allele frequency: 8.343345347750633e-6
allele num: 119856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.207G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+40G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+40G>C
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25837
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-49661558-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661558
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661558
    reference: chr 19
allele count: 1
allele frequency: 8.357290900581667e-6
allele num: 119656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.209C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+42C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+42C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25838
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

19-49661560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661560
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661560
    reference: chr 19
allele count: 2
allele frequency: 1.671122994652406e-5
allele num: 119680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.211C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+44C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+44C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25794
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

19-49661562-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661562
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661562
    reference: chr 19
allele count: 1
allele frequency: 8.360085607276618e-6
allele num: 119616
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.213C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+46C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+46C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25842
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51901
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/19-49661566-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49661566
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49661566
    reference: chr 19
allele count: 2
allele frequency: 1.672744304305644e-5
allele num: 119564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.92+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.92+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.92+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-238+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.92+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.92+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000599628
  gene symbol: TRPM4
  hgvsc: ENST00000599628.1:n.217C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.92+50C>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.127+50C>A
  variant of: http://identifiers.org/hgnc/17993
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25841
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-49669255-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669255
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669256
    reference: chr 19
allele count: 1
allele frequency: 4.482696790389098e-5
allele num: 22308
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2549dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-37dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-37dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2549dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2256dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-37dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-37dupG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-37dupG
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21968
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25277
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6686
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

19-49669255-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669255
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669254
    reference: chr 19
allele count: 1
allele frequency: 4.482696790389098e-5
allele num: 22308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2256delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-37delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-37delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2549delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-37delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-37delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-37delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2549delG
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25277
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21968
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18993
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: CG
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-49669268-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669268
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669267
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 24356
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-27delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2539delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-27delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-27delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2539delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2246delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-27delG
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-27delG
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26765
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17796
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: TG
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

19-49669269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669269
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669269
    reference: chr 19
allele count: 2
allele frequency: 8.167265599477295e-5
allele num: 24488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2541G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-29G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-29G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-29G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2541G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-29G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2248G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-29G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20000
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-49669276-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669276
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669276
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 25654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-22C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-22C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2534C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-22C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2534C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-22C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-22C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2241C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29266
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15663
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-49669278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669278
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669278
    reference: chr 19
allele count: 1
allele frequency: 3.770454716838851e-5
allele num: 26522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2532C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-20C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-20C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2239C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2532C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-20C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-20C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-20C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5045
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14735
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

19-49669280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669280
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669280
    reference: chr 19
allele count: 54
allele frequency: 1.991150442477876e-3
allele num: 27120
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2530C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-18C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-18C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2530C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-18C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2237C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-18C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-18C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 15407
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30715
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2226
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 1
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-49669281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669281
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669281
    reference: chr 19
allele count: 1
allele frequency: 3.655237955990935e-5
allele num: 27358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-17C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-17C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-17C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-17C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-17C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2236C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2529C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2529C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

19-49669282-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669282
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669282
    reference: chr 19
allele count: 1
allele frequency: 3.585257421482863e-5
allele num: 27892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-16G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-16G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-16G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-16G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-16G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2528G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2528G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2235G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

19-49669285-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669285
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669285
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 29436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2232C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2525C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-13C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2525C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32403
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30180
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-49669287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669287
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669287
    reference: chr 19
allele count: 1
allele frequency: 3.301201637396012e-5
allele num: 30292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-11C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-11C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-11C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2523C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-11C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-11C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2523C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2230C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-49669288-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669288
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669288
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 31058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.128-10G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2522G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.93-10G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2522G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.93-10G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.93-10G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.93-10G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2229G>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32884
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10696
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

19-49669300-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669300
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669300
    reference: chr 19
allele count: 1
allele frequency: 2.533826584908529e-5
allele num: 39466
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.95G>C
  hgvsp: ENSP00000252826.4:p.Gly32Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.95G>C
  hgvsp: ENSP00000473231.1:p.Gly32Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.95G>C
  hgvsp: ENSP00000470229.1:p.Gly32Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.95G>C
  hgvsp: ENSP00000407492.1:p.Gly32Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2510G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2217G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.130G>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2510G>C
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly32Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-49669305-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669305
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669305
    reference: chr 19
allele count: 1
allele frequency: 2.384813507583707e-5
allele num: 41932
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.100T>C
  hgvsp: ENST00000252826.5:c.100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.100T>C
  hgvsp: ENST00000427978.2:c.100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.100T>C
  hgvsp: ENST00000598502.1:c.100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2505T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.100T>C
  hgvsp: ENST00000598691.1:c.100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2212T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.135T>C
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2505T>C
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10016
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32591
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31868
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu34Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

19-49669313-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669313
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669313
    reference: chr 19
allele count: 1
allele frequency: 2.197802197802198e-5
allele num: 45500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.108G>A
  hgvsp: ENST00000598691.1:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.108G>A
  hgvsp: ENST00000598502.1:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.143G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2204G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2497G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.108G>A
  hgvsp: ENST00000427978.2:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.108G>A
  hgvsp: ENST00000252826.5:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2497G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5623
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln36Gln
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

19-49669322-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669322
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669322
    reference: chr 19
allele count: 6
allele frequency: 1.205206492045637e-4
allele num: 49784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.152C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2488C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.117C>G
  hgvsp: ENST00000427978.2:c.117C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2488C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.117C>G
  hgvsp: ENST00000252826.5:c.117C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.117C>G
  hgvsp: ENST00000598691.1:c.117C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2195C>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.117C>G
  hgvsp: ENST00000598502.1:c.117C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11807
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg39Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-49669324-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669324
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669324
    reference: chr 19
allele count: 1
allele frequency: 1.959401206991143e-5
allele num: 51036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.119C>T
  hgvsp: ENSP00000407492.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2486C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2193C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.154C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.119C>T
  hgvsp: ENSP00000473231.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2486C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.119C>T
  hgvsp: ENSP00000252826.4:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.119C>T
  hgvsp: ENSP00000470229.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro40Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

19-49669329-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669329
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669329
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 53956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2188A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.124A>G
  hgvsp: ENSP00000473231.1:p.Thr42Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.124A>G
  hgvsp: ENSP00000252826.4:p.Thr42Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2481A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.124A>G
  hgvsp: ENSP00000407492.1:p.Thr42Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.124A>G
  hgvsp: ENSP00000470229.1:p.Thr42Ala
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.159A>G
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2481A>G
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 28866
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14511
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr42Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-49669330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669330
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669330
    reference: chr 19
allele count: 1
allele frequency: 1.851783267286397e-5
allele num: 54002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.125C>T
  hgvsp: ENSP00000407492.1:p.Thr42Ile
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.160C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.125C>T
  hgvsp: ENSP00000470229.1:p.Thr42Ile
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2480C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.125C>T
  hgvsp: ENSP00000252826.4:p.Thr42Ile
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2480C>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.125C>T
  hgvsp: ENSP00000473231.1:p.Thr42Ile
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2187C>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4274
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12919
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr42Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

19-49669332-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669332
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669332
    reference: chr 19
allele count: 7
allele frequency: 1.275184901810763e-4
allele num: 54894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2185G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.127G>A
  hgvsp: ENSP00000252826.4:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.127G>A
  hgvsp: ENSP00000407492.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.162G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.127G>A
  hgvsp: ENSP00000473231.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2478G>A
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.127G>A
  hgvsp: ENSP00000470229.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2478G>A
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28253
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12789
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 28165
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala43Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-49669332-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49669332
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 49669332
    reference: chr 19
allele count: 1
allele frequency: 1.821692716872518e-5
allele num: 54894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130529
  ensembl transcript: ENST00000596338
  gene symbol: TRPM4
  hgvsc: ENST00000596338.1:n.162G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000469893
  ensembl transcript: ENST00000595519
  gene symbol: TRPM4
  hgvsc: ENST00000595519.1:c.93-2185G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000252826
  ensembl transcript: ENST00000252826
  gene symbol: TRPM4
  hgvsc: ENST00000252826.5:c.127G>T
  hgvsp: ENSP00000252826.4:p.Ala43Ser
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000407492
  ensembl transcript: ENST00000427978
  gene symbol: TRPM4
  hgvsc: ENST00000427978.2:c.127G>T
  hgvsp: ENSP00000407492.1:p.Ala43Ser
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000473231
  ensembl transcript: ENST00000598691
  gene symbol: TRPM4
  hgvsc: ENST00000598691.1:c.127G>T
  hgvsp: ENSP00000473231.1:p.Ala43Ser
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000470229
  ensembl transcript: ENST00000598502
  gene symbol: TRPM4
  hgvsc: ENST00000598502.1:c.127G>T
  hgvsp: ENSP00000470229.1:p.Ala43Ser
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000468989
  ensembl transcript: ENST00000598697
  gene symbol: TRPM4
  hgvsc: ENST00000598697.1:c.93-2478G>T
  variant of: http://identifiers.org/hgnc/17993
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130529
  ensembl protein: ENSP00000347944
  ensembl transcript: ENST00000355712
  gene symbol: TRPM4
  hgvsc: ENST00000355712.5:c.-237-2478G>T
  variant of: http://identifiers.org/hgnc/17993
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala43Ser
num of homozygotes: 0
population: Latino
population: East Asian
reference allele: G

GenotypeQuality
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.28633907898122e-4
allele num: 7774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5292
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.306e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.49e-1

FS
type: SiteQuality
SIO_000300: 1.569e0

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 9.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 3.04698e5

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17697
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 385
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.580357142857143e-4
allele num: 5376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.09e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

FS
type: SiteQuality
SIO_000300: 5.017e1

DP
type: SiteQuality
SIO_000300: 3.05135e5

MQ
type: SiteQuality
SIO_000300: 5.338e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.991e0

QD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 98

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 29

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 28

GenotypeQuality
all individuals: 145
bin: 8.75e1
variant carriers: 44

GenotypeQuality
all individuals: 1469
bin: 6.25e1
variant carriers: 96

GenotypeQuality
all individuals: 12414
bin: 7.5e0
variant carriers: 721

GenotypeQuality
all individuals: 273
bin: 3.25e1
variant carriers: 122

GenotypeQuality
all individuals: 1023
bin: 2.25e1
variant carriers: 242

GenotypeQuality
all individuals: 220
bin: 7.25e1
variant carriers: 43

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 68

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 77

GenotypeQuality
all individuals: 4096
bin: 9.75e1
variant carriers: 3618

GenotypeQuality
all individuals: 578
bin: 6.75e1
variant carriers: 90

GenotypeQuality
all individuals: 569
bin: 1.25e1
variant carriers: 337

GenotypeQuality
all individuals: 209
bin: 8.25e1
variant carriers: 47

African
type: Population
allele count: 120
allele frequency: 9.389671361502347e-2
allele num: 1278
num of homozygotes: 10

European (Finnish)
type: Population
allele count: 3
allele frequency: 3.0e-1
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 9.235668789808917e-2
allele num: 314
num of homozygotes: 3

South Asian
type: Population
allele count: 2498
allele frequency: 3.206675224646983e-1
allele num: 7790
num of homozygotes: 432

Other
type: Population
allele count: 37
allele frequency: 2.202380952380952e-1
allele num: 168
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 1831
allele frequency: 3.171111880845168e-1
allele num: 5774
num of homozygotes: 260

Latino
type: Population
allele count: 68
allele frequency: 2.446043165467626e-1
allele num: 278
num of homozygotes: 9

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.249e-1

FS
type: SiteQuality
SIO_000300: 1.127e0

QD
type: SiteQuality
SIO_000300: 1.581e1

DP
type: SiteQuality
SIO_000300: 3.57633e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

GenotypeQuality
all individuals: 842
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.632745024408562e-4
allele num: 5326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.389999999999999e-2

FS
type: SiteQuality
SIO_000300: 8.441500000000001e1

MQRankSum
type: SiteQuality
SIO_000300: -3.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.638e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.563e1

DP
type: SiteQuality
SIO_000300: 2.84903e5

QD
type: SiteQuality
SIO_000300: 7.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.347e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e0

GenotypeQuality
all individuals: 2244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.08e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.17e-2

DP
type: SiteQuality
SIO_000300: 2.93966e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.749e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1929
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 262
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19939
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.41e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 3.04842e5

GenotypeQuality
all individuals: 20088
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3697
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1076
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.284026707755521e-4
allele num: 7788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.945e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.45e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.421e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.476e0

DP
type: SiteQuality
SIO_000300: 3.05676e5

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20394
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3695
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553277415346381e-4
allele num: 6438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.867e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 2.447e0

QD
type: SiteQuality
SIO_000300: 9.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.530000000000001e-2

DP
type: SiteQuality
SIO_000300: 3.07148e5

GenotypeQuality
all individuals: 337
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21715
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3997
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.06587e5

VQSLOD
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 1.088e1

MQ
type: SiteQuality
SIO_000300: 5.344e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.69e-2

GenotypeQuality
all individuals: 23939
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2551
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4708
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511030522816561e-4
allele num: 6618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.94e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

DP
type: SiteQuality
SIO_000300: 3.09866e5

VQSLOD
type: SiteQuality
SIO_000300: -2.075e0

QD
type: SiteQuality
SIO_000300: 4.11e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 333
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 361
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1656
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.298364061282784e-4
allele num: 7702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.10571e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e-1

BaseQRankSum
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SIO_000300: 8.04e-1

MQ
type: SiteQuality
SIO_000300: 5.827e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.01e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.126e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 1.297690111601349e-4
allele num: 7706
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

VQSLOD
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SIO_000300: -1.984e0

ClippingRankSum
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SIO_000300: 5.14e-1

DP
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QD
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BaseQRankSum
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SIO_000300: -1.495e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.72e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00228173411793e-5
allele num: 66616
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.153e0

ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
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DP
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VQSLOD
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SIO_000300: 4.7e-2

MQRankSum
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SIO_000300: 1.92e-1

QD
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SIO_000300: 1.706e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001380635092142e-5
allele num: 66636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 5.145334e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

QD
type: SiteQuality
SIO_000300: 1.107e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001860576778802e-5
allele num: 66646
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

FS
type: SiteQuality
SIO_000300: 9.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 5.146442e6

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.096e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.227e0

QD
type: SiteQuality
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VQSLOD
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SIO_000300: 1.6e0

InbreedingCoeff
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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DP
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BaseQRankSum
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MQ
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SIO_000300: 5.958e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.502100588164687e-5
allele num: 66648
num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele num: 16510
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African
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Other
type: Population
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allele frequency: 1.101321585903084e-3
allele num: 908
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European (Non-Finnish)
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allele frequency: 8.998740176375308e-5
allele num: 66676
num of homozygotes: 0

East Asian
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Latino
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num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 51642
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.627487274409995e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.186e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 5.153257e6

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

QD
type: SiteQuality
SIO_000300: 1.2e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

GenotypeQuality
all individuals: 1030
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.186e0

QD
type: SiteQuality
SIO_000300: 1.2e1

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.153257e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 864
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.289e1

FS
type: SiteQuality
SIO_000300: 1.992e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e0

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 5.153129e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 51643
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -1.579e-1

FS
type: SiteQuality
SIO_000300: 8.442e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.56e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

DP
type: SiteQuality
SIO_000300: 5.153039e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.958e0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
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variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 1.544e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
type: SiteQuality
SIO_000300: 2.38e0

FS
type: SiteQuality
SIO_000300: 2.931e0

DP
type: SiteQuality
SIO_000300: 5.153006e6

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e0

GenotypeQuality
all individuals: 1023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

FS
type: SiteQuality
SIO_000300: 5.149e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.279e0

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 5.152655e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817300702689605e-4
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.746e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66496
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 2.900792883388126e-4
allele num: 10342
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 852
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164415463437354e-4
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 5.145159e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.315e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.124e0

QD
type: SiteQuality
SIO_000300: 1.166e1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51638
bin: 9.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.334889148191366e-4
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

DP
type: SiteQuality
SIO_000300: 5.140076e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 28

South Asian
type: Population
allele count: 29
allele frequency: 1.75800193986421e-3
allele num: 16496
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

FS
type: SiteQuality
SIO_000300: 6.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.89e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.528e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

DP
type: SiteQuality
SIO_000300: 5.141808e6

QD
type: SiteQuality
SIO_000300: 1.229e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 544
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variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.524340954334319e-5
allele num: 66308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

DP
type: SiteQuality
SIO_000300: 5.141808e6

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.528e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.89e-2

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeQuality
all individuals: 51638
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 611
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.603262755987504e-4
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.812e0

QD
type: SiteQuality
SIO_000300: 1.252e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.787e0

DP
type: SiteQuality
SIO_000300: 5.139081e6

VQSLOD
type: SiteQuality
SIO_000300: 9.419999999999999e-1

GenotypeQuality
all individuals: 844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66288
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 5.138437e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.225e0

VQSLOD
type: SiteQuality
SIO_000300: 8.72e-1

FS
type: SiteQuality
SIO_000300: 2.423e0

QD
type: SiteQuality
SIO_000300: 1.253e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 39
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.606e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.137158e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

FS
type: SiteQuality
SIO_000300: 2.279e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.032e1

DP
type: SiteQuality
SIO_000300: 5.13701e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.203e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 636
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1282
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.735809755250825e-4
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.59e-1

DP
type: SiteQuality
SIO_000300: 5.137213e6

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.073e1

GenotypeQuality
all individuals: 975
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.680555555555556e-5
allele num: 11520
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 5.136614e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.93e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 2.392e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.215e0

GenotypeQuality
all individuals: 2460
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51639
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.060706735125339e-5
allele num: 66220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: -8.654e0

DP
type: SiteQuality
SIO_000300: 5.135179e6

FS
type: SiteQuality
SIO_000300: 1.622e0

VQSLOD
type: SiteQuality
SIO_000300: -1.094e0

MQ
type: SiteQuality
SIO_000300: 5.218e1

QD
type: SiteQuality
SIO_000300: 2.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51634
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510802235987309e-5
allele num: 66190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 5.133415e6

FS
type: SiteQuality
SIO_000300: 4.66e0

QD
type: SiteQuality
SIO_000300: 1.275e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.97e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

GenotypeQuality
all individuals: 839
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511990081345066e-5
allele num: 66138
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.552e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.473e0

DP
type: SiteQuality
SIO_000300: 5.13146e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.884e1

GenotypeQuality
all individuals: 1123
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 948
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171783454417624e-4
allele num: 8534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.66e-1

FS
type: SiteQuality
SIO_000300: 7.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 1.46e1

DP
type: SiteQuality
SIO_000300: 5.127663e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 15

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 493
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 1577
bin: 6.25e1
variant carriers: 13

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 15

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 53657
bin: 9.75e1
variant carriers: 19233

GenotypeQuality
all individuals: 854
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 742
bin: 7.75e1
variant carriers: 19

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 14

GenotypeQuality
all individuals: 532
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 584
bin: 9.25e1
variant carriers: 24

South Asian
type: Population
allele count: 2304
allele frequency: 1.398227940284015e-1
allele num: 16478
num of homozygotes: 178

Latino
type: Population
allele count: 4009
allele frequency: 3.487906733948147e-1
allele num: 11494
num of homozygotes: 733

European (Finnish)
type: Population
allele count: 960
allele frequency: 1.455427531837477e-1
allele num: 6596
num of homozygotes: 70

European (Non-Finnish)
type: Population
allele count: 9161
allele frequency: 1.387862077323961e-1
allele num: 66008
num of homozygotes: 652

Other
type: Population
allele count: 133
allele frequency: 1.477777777777778e-1
allele num: 900
num of homozygotes: 14

African
type: Population
allele count: 3155
allele frequency: 3.082861051397303e-1
allele num: 10234
num of homozygotes: 477

East Asian
type: Population
allele count: 1995
allele frequency: 2.347611202635914e-1
allele num: 8498
num of homozygotes: 205

VQSLOD
type: SiteQuality
SIO_000300: 5.86e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

DP
type: SiteQuality
SIO_000300: 6.190823e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.26e-2

QD
type: SiteQuality
SIO_000300: 1.712e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.820609297244811e-4
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.26e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

QD
type: SiteQuality
SIO_000300: 1.712e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.86e0

DP
type: SiteQuality
SIO_000300: 6.190823e6

GenotypeQuality
all individuals: 292
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51911
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

FS
type: SiteQuality
SIO_000300: 2.232e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.503e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -6.913e-1

DP
type: SiteQuality
SIO_000300: 5.281223e6

QD
type: SiteQuality
SIO_000300: 1.259e1

GenotypeQuality
all individuals: 1030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51911
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.561072764314167e-5
allele num: 65774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

DP
type: SiteQuality
SIO_000300: 5.280486e6

FS
type: SiteQuality
SIO_000300: 3.094e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.229e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 1732
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51910
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 323
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

DP
type: SiteQuality
SIO_000300: 5.279819e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.324e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.971e0

FS
type: SiteQuality
SIO_000300: 2.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.163e0

VQSLOD
type: SiteQuality
SIO_000300: 3.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.25e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523600572873815e-5
allele num: 65634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.383e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.44e-1

DP
type: SiteQuality
SIO_000300: 5.275405e6

FS
type: SiteQuality
SIO_000300: 2.045e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

QD
type: SiteQuality
SIO_000300: 2.699e1

GenotypeQuality
all individuals: 690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 541
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variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.046180090166931e-5
allele num: 65656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 5.273165e6

QD
type: SiteQuality
SIO_000300: 1.357e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 469
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variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.058e0

DP
type: SiteQuality
SIO_000300: 5.275048e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

QD
type: SiteQuality
SIO_000300: 1.594e1

GenotypeQuality
all individuals: 500
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 272
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GenotypeQuality
all individuals: 51913
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 852
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variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.033060357901122e-4
allele num: 6594
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.061e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.692e0

DP
type: SiteQuality
SIO_000300: 5.27467e6

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.187e1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.038205980066445e-4
allele num: 9632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1616
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 1.137e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.4533e5

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.038205980066445e-4
allele num: 9632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.07e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.137e1

ClippingRankSum
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SIO_000300: 0.0e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.4533e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 1894
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1836
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.604e1

DP
type: SiteQuality
SIO_000300: 4.92616e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 8.880994671403197e-4
allele num: 2252
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -3.38e-2

FS
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 2374
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 1958
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Other
type: Population
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allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 11662
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

FS
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DP
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQ
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QD
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SIO_000300: 2.982e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

African
type: Population
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allele num: 2494
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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MQ
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DP
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 56

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 2.043176561295297e-2
allele num: 2594
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 7.955449482895784e-5
allele num: 12570
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.67e-2

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
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African
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allele num: 2608
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8486
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 400
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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VQSLOD
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SIO_000300: -1.238e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.76e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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African
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East Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 414
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Latino
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allele frequency: 1.234567901234568e-3
allele num: 810
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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African
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East Asian
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ReadPosRankSum
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VQSLOD
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MQ
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FS
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
type: Population
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European (Non-Finnish)
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East Asian
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Latino
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African
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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East Asian
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Other
type: Population
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MQ
type: SiteQuality
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QD
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ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3660
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 20610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.064509261230573e-4
allele num: 9394
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
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SIO_000300: 1.514e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 3.755e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQ
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.491152429713464e-5
allele num: 22266
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3866
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9546
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.829e1

DP
type: SiteQuality
SIO_000300: 6.92714e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
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SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 3.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24596
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3754
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1048
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.017708121310808e-4
allele num: 9826
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

FS
type: SiteQuality
SIO_000300: 1.193e0

MQRankSum
type: SiteQuality
SIO_000300: -4.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.271e0

DP
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SIO_000300: 7.19196e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2204
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.488833746898263e-3
allele num: 4030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.32e-2

FS
type: SiteQuality
SIO_000300: 6.379e0

VQSLOD
type: SiteQuality
SIO_000300: -1.867e0

DP
type: SiteQuality
SIO_000300: 7.5344e5

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

QD
type: SiteQuality
SIO_000300: 2.288e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.17296827466319e-4
allele num: 4602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28222
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.338e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.60115e5

VQSLOD
type: SiteQuality
SIO_000300: -4.133e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30120
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.443e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 3.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30110
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.305209774089442e-4
allele num: 4338
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.12e-1

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.25754120789628e-5
allele num: 30698
num of homozygotes: 0

African
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allele frequency: 1.008878127522195e-3
allele num: 4956
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1412
num of homozygotes: 0

Latino
type: Population
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allele frequency: 3.770739064856712e-4
allele num: 2652
num of homozygotes: 0

South Asian
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1471
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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