http://identifiers.org/exac.variant/19-14584949-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14584949
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14584949
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 7062
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.184G>T
  hgvsp: ENSP00000292513.3:p.Gly62Cys
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Gly62Cys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 122
  num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-14584953-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14584953
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14584953
    reference: chr 19
allele count: 1
allele frequency: 1.365374112506827e-4
allele num: 7324
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.180C>T
  hgvsp: ENST00000292513.3:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1763
  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 74
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala60Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1528
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

19-14584964-G-GCAGCGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14584964
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14584970
    reference: chr 19
allele count: 1
allele frequency: 1.301405517959396e-4
allele num: 7684
alternate allele: GCAGCGC
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.163_168dupGCGCTG
  hgvsp: ENSP00000292513.3:p.Ala55_Leu56dup
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 167
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
hgvs: p.Ala55_Leu56dup
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 140
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

19-14584992-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14584992
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14584992
    reference: chr 19
allele count: 1
allele frequency: 1.046901172529313e-4
allele num: 9552
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.141C>T
  hgvsp: ENST00000292513.3:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala47Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2292
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 86
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

19-14585012-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585012
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585012
    reference: chr 19
allele count: 1
allele frequency: 9.9147332936744e-5
allele num: 10086
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.121T>A
  hgvsp: ENSP00000292513.3:p.Phe41Ile
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26634
  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24923
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4438
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe41Ile
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.408847562693716e-4
  allele num: 7098
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 180
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

19-14585015-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585015
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585015
    reference: chr 19
allele count: 1
allele frequency: 9.889240506329114e-5
allele num: 10112
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.118A>G
  hgvsp: ENSP00000292513.3:p.Ile40Val
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 346
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 71
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile40Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2482
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 140
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-14585022-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585022
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585022
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10136
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.111G>T
  hgvsp: ENST00000292513.3:c.111G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25899
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22810
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 4402
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Ala37Ala
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 86
  num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-14585024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585024
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585024
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10138
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.109G>A
  hgvsp: ENSP00000292513.3:p.Ala37Thr
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22641
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 344
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala37Thr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 112
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

19-14585074-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585074
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585074
    reference: chr 19
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.59C>T
  hgvsp: ENSP00000292513.3:p.Ala20Val
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 1416
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala20Val
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 130
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 202
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-14585076-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585076
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585076
    reference: chr 19
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.57G>T
  hgvsp: ENST00000292513.3:c.57G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala19Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2582
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

19-14585076-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585076
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585076
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10376
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.57G>A
  hgvsp: ENST00000292513.3:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27723
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25182
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Ala19Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2582
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-14585077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585077
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585077
    reference: chr 19
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.56C>T
  hgvsp: ENSP00000292513.3:p.Ala19Val
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27761
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25296
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala19Val
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 116
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

19-14585078-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585078
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585078
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.55G>A
  hgvsp: ENSP00000292513.3:p.Ala19Thr
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27373
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2883
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24515
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala19Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 210
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

19-14585079-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585079
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585079
    reference: chr 19
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.54C>A
  hgvsp: ENSP00000292513.3:p.Cys18Ter
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 24880
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4523
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys18Ter
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7250
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 118
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

19-14585115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585115
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585115
    reference: chr 19
allele count: 3
allele frequency: 2.959747434885557e-4
allele num: 10136
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.18C>T
  hgvsp: ENST00000292513.3:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24308
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 75
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  variant carriers: 0
hgvs: p.Pro6Pro
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 210
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 118
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

19-14585116-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585116
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585116
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10142
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.17C>T
  hgvsp: ENSP00000292513.3:p.Pro6Leu
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 1
hgvs: p.Pro6Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 210
  num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-14585117-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585117
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585117
    reference: chr 19
allele count: 2
allele frequency: 1.972386587771203e-4
allele num: 10140
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.16C>T
  hgvsp: ENSP00000292513.3:p.Pro6Ser
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24
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hgvs: p.Pro6Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 132
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-14585128-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585128
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585128
    reference: chr 19
allele count: 1
allele frequency: 1.015640869388584e-4
allele num: 9846
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.5G>A
  hgvsp: ENSP00000292513.3:p.Ser2Asn
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 23923
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21530
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser2Asn
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 4.807692307692308e-3
  allele num: 208
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 114
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/19-14585143-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585143
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585143
    reference: chr 19
allele count: 2
allele frequency: 2.124044180118947e-4
allele num: 9416
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.-11T>G
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22803
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2911
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19950
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6572
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 102
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

19-14585143-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14585143
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14585143
    reference: chr 19
allele count: 1
allele frequency: 1.062022090059473e-4
allele num: 9416
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160951
  ensembl protein: ENSP00000292513
  ensembl transcript: ENST00000292513
  gene symbol: PTGER1
  hgvsc: ENST00000292513.3:c.-11T>C
  variant of: http://identifiers.org/hgnc/9593
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22803
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2911
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19950
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 4.284490145672665e-4
  allele num: 2334
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6572
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 196
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-14589188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589188
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589188
    reference: chr 19
allele count: 1
allele frequency: 2.57360510603253e-5
allele num: 38856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*381C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1459C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13570
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29385
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8843
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5062
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

19-14589193-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589193
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589193
    reference: chr 19
allele count: 1
allele frequency: 2.533313066828799e-5
allele num: 39474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*376G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1454G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5073
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-14589194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589194
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589194
    reference: chr 19
allele count: 1
allele frequency: 2.482868209355447e-5
allele num: 40276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*375C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1453C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*34C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27055
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5091
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

19-14589197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589197
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589197
    reference: chr 19
allele count: 109
allele frequency: 2.647687524290711e-3
allele num: 41168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*31G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1450G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*372G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30851
  bin: 7.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 1.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13383
  bin: 1.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8243
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2433
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 28425
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5208
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 4
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-14589198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589198
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589198
    reference: chr 19
allele count: 2
allele frequency: 4.752625825768737e-5
allele num: 42082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1449C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*371C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31053
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13177
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6881
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-14589199-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589199
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589199
    reference: chr 19
allele count: 2
allele frequency: 4.68230556726132e-5
allele num: 42714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1448C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*370C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*29C>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13075
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6687
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-14589200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589200
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 43262
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*369C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1447C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*28C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31222
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-14589209-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589209
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589209
    reference: chr 19
allele count: 1
allele frequency: 2.117298327334321e-5
allele num: 47230
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*19C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1438C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*360C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31319
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4609
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-14589213-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589213
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589213
    reference: chr 19
allele count: 2
allele frequency: 3.961494275640771e-5
allele num: 50486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*356C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1434C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*15C>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11198
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

19-14589217-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589217
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589217
    reference: chr 19
allele count: 6
allele frequency: 1.137742718446602e-4
allele num: 52736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1430G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*352G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*11G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29842
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11076
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29396
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1862
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

19-14589218-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589218
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589218
    reference: chr 19
allele count: 1
allele frequency: 1.854393057152394e-5
allele num: 53926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*351C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1429C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*10C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29398
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4196
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10306
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-14589220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589220
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589220
    reference: chr 19
allele count: 2
allele frequency: 3.534443148481957e-5
allele num: 56586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1427C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28879
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-14589222-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589222
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589222
    reference: chr 19
allele count: 2
allele frequency: 3.463923239461013e-5
allele num: 57738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*347C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1425C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12390
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28473
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

19-14589231-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589231
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589231
    reference: chr 19
allele count: 1
allele frequency: 1.575895108421584e-5
allele num: 63456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*338C>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.999C>G
  hgvsp: ENSP00000340698.1:p.Tyr333Ter
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.708C>G
  hgvsp: ENSP00000467077.1:p.Tyr236Ter
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.708C>G
  hgvsp: ENSP00000376749.3:p.Tyr236Ter
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.384C>G
  hgvsp: ENSP00000466312.1:p.Tyr128Ter
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1416C>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.708C>G
  hgvsp: ENSP00000376748.1:p.Tyr236Ter
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.999C>G
  hgvsp: ENSP00000376753.3:p.Tyr333Ter
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.999C>G
  hgvsp: ENSP00000466747.1:p.Tyr333Ter
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr333Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-14589232-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589232
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589232
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 64224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*337A>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.998A>G
  hgvsp: ENSP00000466747.1:p.Tyr333Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.998A>G
  hgvsp: ENSP00000340698.1:p.Tyr333Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.707A>G
  hgvsp: ENSP00000467077.1:p.Tyr236Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1415A>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.707A>G
  hgvsp: ENSP00000376748.1:p.Tyr236Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.383A>G
  hgvsp: ENSP00000466312.1:p.Tyr128Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.707A>G
  hgvsp: ENSP00000376749.3:p.Tyr236Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.998A>G
  hgvsp: ENSP00000376753.3:p.Tyr333Cys
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26139
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr333Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-14589235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589235
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589235
    reference: chr 19
allele count: 3
allele frequency: 4.529532552240609e-5
allele num: 66232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.995G>A
  hgvsp: ENSP00000466747.1:p.Arg332His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.995G>A
  hgvsp: ENSP00000376753.3:p.Arg332His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.995G>A
  hgvsp: ENSP00000340698.1:p.Arg332His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*334G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.704G>A
  hgvsp: ENSP00000376748.1:p.Arg235His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.704G>A
  hgvsp: ENSP00000467077.1:p.Arg235His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.704G>A
  hgvsp: ENSP00000376749.3:p.Arg235His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.380G>A
  hgvsp: ENSP00000466312.1:p.Arg127His
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1412G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Arg332His
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-14589236-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589236
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589236
    reference: chr 19
allele count: 1
allele frequency: 1.481876648587772e-5
allele num: 67482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.994C>T
  hgvsp: ENSP00000466747.1:p.Arg332Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.994C>T
  hgvsp: ENSP00000340698.1:p.Arg332Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*333C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.703C>T
  hgvsp: ENSP00000376748.1:p.Arg235Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.703C>T
  hgvsp: ENSP00000467077.1:p.Arg235Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1411C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.379C>T
  hgvsp: ENSP00000466312.1:p.Arg127Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.994C>T
  hgvsp: ENSP00000376753.3:p.Arg332Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.703C>T
  hgvsp: ENSP00000376749.3:p.Arg235Cys
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg332Cys
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

19-14589239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589239
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589239
    reference: chr 19
allele count: 2
allele frequency: 2.850627137970353e-5
allele num: 70160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.700G>A
  hgvsp: ENSP00000467077.1:p.Gly234Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.376G>A
  hgvsp: ENSP00000466312.1:p.Gly126Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.991G>A
  hgvsp: ENSP00000376753.3:p.Gly331Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1408G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.991G>A
  hgvsp: ENSP00000466747.1:p.Gly331Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.991G>A
  hgvsp: ENSP00000340698.1:p.Gly331Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.700G>A
  hgvsp: ENSP00000376748.1:p.Gly234Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.700G>A
  hgvsp: ENSP00000376749.3:p.Gly234Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*330G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8910
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17895
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly331Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

19-14589240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589240
    reference: chr 19
allele count: 21
allele frequency: 2.923650943921591e-4
allele num: 71828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.990C>T
  hgvsp: ENST00000586027.1:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1407C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*329C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.375C>T
  hgvsp: ENST00000589631.1:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.699C>T
  hgvsp: ENST00000393029.3:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.699C>T
  hgvsp: ENST00000393028.1:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.990C>T
  hgvsp: ENST00000393033.4:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.699C>T
  hgvsp: ENST00000591349.1:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.990C>T
  hgvsp: ENST00000345425.2:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18898
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22921
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val330Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-14589243-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589243
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589243
    reference: chr 19
allele count: 1
allele frequency: 1.340482573726541e-5
allele num: 74600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1404G>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.987G>T
  hgvsp: ENSP00000340698.1:p.Lys329Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.372G>T
  hgvsp: ENSP00000466312.1:p.Lys124Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.696G>T
  hgvsp: ENSP00000467077.1:p.Lys232Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.696G>T
  hgvsp: ENSP00000376749.3:p.Lys232Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.696G>T
  hgvsp: ENSP00000376748.1:p.Lys232Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.987G>T
  hgvsp: ENSP00000466747.1:p.Lys329Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.987G>T
  hgvsp: ENSP00000376753.3:p.Lys329Asn
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*326G>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8211
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21830
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22708
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys329Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-14589248-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589248
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589248
    reference: chr 19
allele count: 1
allele frequency: 1.28929114772698e-5
allele num: 77562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.982G>T
  hgvsp: ENSP00000466747.1:p.Ala328Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.691G>T
  hgvsp: ENSP00000467077.1:p.Ala231Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.691G>T
  hgvsp: ENSP00000376748.1:p.Ala231Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1399G>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.982G>T
  hgvsp: ENSP00000376753.3:p.Ala328Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.982G>T
  hgvsp: ENSP00000340698.1:p.Ala328Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.691G>T
  hgvsp: ENSP00000376749.3:p.Ala231Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.367G>T
  hgvsp: ENSP00000466312.1:p.Ala123Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*321G>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala328Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

19-14589249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589249
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589249
    reference: chr 19
allele count: 8
allele frequency: 1.019030392581459e-4
allele num: 78506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.366C>T
  hgvsp: ENST00000589631.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1398C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.690C>T
  hgvsp: ENST00000393029.3:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.981C>T
  hgvsp: ENST00000393033.4:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.981C>T
  hgvsp: ENST00000345425.2:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*320C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.981C>T
  hgvsp: ENST00000586027.1:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.690C>T
  hgvsp: ENST00000393028.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.690C>T
  hgvsp: ENST00000591349.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19959
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20002
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp327Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

19-14589256-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589256
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589256
    reference: chr 19
allele count: 5
allele frequency: 5.965021116174751e-5
allele num: 83822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.683T>C
  hgvsp: ENSP00000467077.1:p.Ile228Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.359T>C
  hgvsp: ENSP00000466312.1:p.Ile120Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.974T>C
  hgvsp: ENSP00000376753.3:p.Ile325Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*313T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.974T>C
  hgvsp: ENSP00000466747.1:p.Ile325Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.974T>C
  hgvsp: ENSP00000340698.1:p.Ile325Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.683T>C
  hgvsp: ENSP00000376748.1:p.Ile228Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1391T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.683T>C
  hgvsp: ENSP00000376749.3:p.Ile228Thr
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24102
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile325Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-14589260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589260
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589260
    reference: chr 19
allele count: 4
allele frequency: 4.689771608122684e-5
allele num: 85292
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.970G>A
  hgvsp: ENSP00000376753.3:p.Ala324Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*309G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.679G>A
  hgvsp: ENSP00000467077.1:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.679G>A
  hgvsp: ENSP00000376748.1:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.970G>A
  hgvsp: ENSP00000466747.1:p.Ala324Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.679G>A
  hgvsp: ENSP00000376749.3:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.970G>A
  hgvsp: ENSP00000340698.1:p.Ala324Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.355G>A
  hgvsp: ENSP00000466312.1:p.Ala119Thr
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1387G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala324Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

19-14589261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589261
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589261
    reference: chr 19
allele count: 3
allele frequency: 3.476084538375973e-5
allele num: 86304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.678C>T
  hgvsp: ENST00000393028.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.969C>T
  hgvsp: ENST00000393033.4:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.678C>T
  hgvsp: ENST00000591349.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.969C>T
  hgvsp: ENST00000345425.2:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*308C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1386C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.678C>T
  hgvsp: ENST00000393029.3:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.969C>T
  hgvsp: ENST00000586027.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.354C>T
  hgvsp: ENST00000589631.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24789
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly323Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

19-14589269-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589269
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589269
    reference: chr 19
allele count: 1
allele frequency: 1.092490222212511e-5
allele num: 91534
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1378G>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.961G>C
  hgvsp: ENSP00000466747.1:p.Val321Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.346G>C
  hgvsp: ENSP00000466312.1:p.Val116Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*300G>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.961G>C
  hgvsp: ENSP00000340698.1:p.Val321Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.670G>C
  hgvsp: ENSP00000467077.1:p.Val224Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.670G>C
  hgvsp: ENSP00000376748.1:p.Val224Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.670G>C
  hgvsp: ENSP00000376749.3:p.Val224Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.961G>C
  hgvsp: ENSP00000376753.3:p.Val321Leu
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14119
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val321Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-14589269-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589269
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589269
    reference: chr 19
allele count: 2
allele frequency: 2.184980444425022e-5
allele num: 91534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.346G>A
  hgvsp: ENSP00000466312.1:p.Val116Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.670G>A
  hgvsp: ENSP00000376748.1:p.Val224Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.961G>A
  hgvsp: ENSP00000466747.1:p.Val321Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1378G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.961G>A
  hgvsp: ENSP00000340698.1:p.Val321Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.961G>A
  hgvsp: ENSP00000376753.3:p.Val321Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.670G>A
  hgvsp: ENSP00000467077.1:p.Val224Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*300G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.670G>A
  hgvsp: ENSP00000376749.3:p.Val224Ile
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val321Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-14589276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589276
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589276
    reference: chr 19
allele count: 1
allele frequency: 1.036333865318051e-5
allele num: 96494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.663C>T
  hgvsp: ENST00000591349.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.954C>T
  hgvsp: ENST00000586027.1:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.339C>T
  hgvsp: ENST00000589631.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.663C>T
  hgvsp: ENST00000393029.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.954C>T
  hgvsp: ENST00000345425.2:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1371C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.954C>T
  hgvsp: ENST00000393033.4:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.663C>T
  hgvsp: ENST00000393028.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*293C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val318Val
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

19-14589278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589278
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589278
    reference: chr 19
allele count: 2
allele frequency: 2.055456208505478e-5
allele num: 97302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.337G>A
  hgvsp: ENSP00000466312.1:p.Val113Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.952G>A
  hgvsp: ENSP00000466747.1:p.Val318Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.661G>A
  hgvsp: ENSP00000376749.3:p.Val221Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.661G>A
  hgvsp: ENSP00000467077.1:p.Val221Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.952G>A
  hgvsp: ENSP00000376753.3:p.Val318Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*291G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.952G>A
  hgvsp: ENSP00000340698.1:p.Val318Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.661G>A
  hgvsp: ENSP00000376748.1:p.Val221Ile
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1369G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val318Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

19-14589279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589279
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589279
    reference: chr 19
allele count: 8
allele frequency: 8.145146510822864e-5
allele num: 98218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.660C>T
  hgvsp: ENST00000393029.3:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.336C>T
  hgvsp: ENST00000589631.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.951C>T
  hgvsp: ENST00000345425.2:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.660C>T
  hgvsp: ENST00000393028.1:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*290C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.951C>T
  hgvsp: ENST00000393033.4:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.660C>T
  hgvsp: ENST00000591349.1:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.951C>T
  hgvsp: ENST00000586027.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1368C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30370
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12019
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe317Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

19-14589284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589284
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589284
    reference: chr 19
allele count: 1
allele frequency: 9.886698435924308e-6
allele num: 101146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1363G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.655G>A
  hgvsp: ENSP00000467077.1:p.Glu219Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.946G>A
  hgvsp: ENSP00000466747.1:p.Glu316Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.655G>A
  hgvsp: ENSP00000376748.1:p.Glu219Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.655G>A
  hgvsp: ENSP00000376749.3:p.Glu219Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.946G>A
  hgvsp: ENSP00000376753.3:p.Glu316Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.331G>A
  hgvsp: ENSP00000466312.1:p.Glu111Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.946G>A
  hgvsp: ENSP00000340698.1:p.Glu316Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*285G>A
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu316Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-14589285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589285
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589285
    reference: chr 19
allele count: 1
allele frequency: 9.818938769097836e-6
allele num: 101844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.330C>T
  hgvsp: ENST00000589631.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.654C>T
  hgvsp: ENST00000393028.1:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*284C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.945C>T
  hgvsp: ENST00000345425.2:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.945C>T
  hgvsp: ENST00000586027.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.654C>T
  hgvsp: ENST00000393029.3:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.945C>T
  hgvsp: ENST00000393033.4:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1362C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.654C>T
  hgvsp: ENST00000591349.1:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp315Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

19-14589293-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589293
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589293
    reference: chr 19
allele count: 1
allele frequency: 9.399202947590044e-6
allele num: 106392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*276T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.937T>C
  hgvsp: ENSP00000376753.3:p.Phe313Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.937T>C
  hgvsp: ENSP00000340698.1:p.Phe313Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.646T>C
  hgvsp: ENSP00000467077.1:p.Phe216Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1354T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.937T>C
  hgvsp: ENSP00000466747.1:p.Phe313Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.646T>C
  hgvsp: ENSP00000376748.1:p.Phe216Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.646T>C
  hgvsp: ENSP00000376749.3:p.Phe216Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.322T>C
  hgvsp: ENSP00000466312.1:p.Phe108Leu
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe313Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-14589298-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589298
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589298
    reference: chr 19
allele count: 1
allele frequency: 9.208272712204645e-6
allele num: 108598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.932T>G
  hgvsp: ENSP00000340698.1:p.Phe311Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.932T>G
  hgvsp: ENSP00000376753.3:p.Phe311Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.641T>G
  hgvsp: ENSP00000467077.1:p.Phe214Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.932T>G
  hgvsp: ENSP00000466747.1:p.Phe311Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*271T>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.641T>G
  hgvsp: ENSP00000376748.1:p.Phe214Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.317T>G
  hgvsp: ENSP00000466312.1:p.Phe106Cys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1349T>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.641T>G
  hgvsp: ENSP00000376749.3:p.Phe214Cys
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe311Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-14589299-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589299
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589299
    reference: chr 19
allele count: 2
allele frequency: 1.835805551475988e-5
allele num: 108944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.640T>C
  hgvsp: ENSP00000467077.1:p.Phe214Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1348T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.931T>C
  hgvsp: ENSP00000340698.1:p.Phe311Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.931T>C
  hgvsp: ENSP00000466747.1:p.Phe311Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.316T>C
  hgvsp: ENSP00000466312.1:p.Phe106Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.640T>C
  hgvsp: ENSP00000376748.1:p.Phe214Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.640T>C
  hgvsp: ENSP00000376749.3:p.Phe214Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.931T>C
  hgvsp: ENSP00000376753.3:p.Phe311Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*270T>C
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe311Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/19-14589303-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589303
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589303
    reference: chr 19
allele count: 20
allele frequency: 1.82535046728972e-4
allele num: 109568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.927T>G
  hgvsp: ENST00000345425.2:c.927T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.312T>G
  hgvsp: ENST00000589631.1:c.312T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.636T>G
  hgvsp: ENST00000393029.3:c.636T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.636T>G
  hgvsp: ENST00000591349.1:c.636T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.636T>G
  hgvsp: ENST00000393028.1:c.636T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.927T>G
  hgvsp: ENST00000393033.4:c.927T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1344T>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.927T>G
  hgvsp: ENST00000586027.1:c.927T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*266T>G
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34539
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11187
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly309Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-14589308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589308
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589308
    reference: chr 19
allele count: 1
allele frequency: 8.869022278983965e-6
allele num: 112752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.307C>T
  hgvsp: ENST00000589631.1:c.307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*261C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.631C>T
  hgvsp: ENST00000591349.1:c.631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.922C>T
  hgvsp: ENST00000345425.2:c.922C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.922C>T
  hgvsp: ENST00000393033.4:c.922C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.922C>T
  hgvsp: ENST00000586027.1:c.922C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.631C>T
  hgvsp: ENST00000393028.1:c.631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1339C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.631C>T
  hgvsp: ENST00000393029.3:c.631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4781
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu308Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

19-14589310-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589310
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589310
    reference: chr 19
allele count: 2
allele frequency: 1.762176640586453e-5
allele num: 113496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*259G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.629G>A
  hgvsp: ENSP00000376749.3:p.Arg210Gln
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.305G>A
  hgvsp: ENSP00000466312.1:p.Arg102Gln
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.629G>A
  hgvsp: ENSP00000467077.1:p.Arg210Gln
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.920G>A
  hgvsp: ENSP00000376753.3:p.Arg307Gln
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.629G>A
  hgvsp: ENSP00000376748.1:p.Arg210Gln
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1337G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.920G>A
  hgvsp: ENSP00000466747.1:p.Arg307Gln
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.920G>A
  hgvsp: ENSP00000340698.1:p.Arg307Gln
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg307Gln
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-14589311-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589311
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589311
    reference: chr 19
allele count: 10
allele frequency: 8.751816001820378e-5
allele num: 114262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.304C>T
  hgvsp: ENSP00000466312.1:p.Arg102Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.628C>T
  hgvsp: ENSP00000376748.1:p.Arg210Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.919C>T
  hgvsp: ENSP00000466747.1:p.Arg307Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.628C>T
  hgvsp: ENSP00000376749.3:p.Arg210Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1336C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.919C>T
  hgvsp: ENSP00000340698.1:p.Arg307Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.628C>T
  hgvsp: ENSP00000467077.1:p.Arg210Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.919C>T
  hgvsp: ENSP00000376753.3:p.Arg307Trp
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*258C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12784
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35468
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3957
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg307Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

19-14589315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589315
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589315
    reference: chr 19
allele count: 2
allele frequency: 1.728040920008986e-5
allele num: 115738
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.915C>T
  hgvsp: ENST00000393033.4:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.624C>T
  hgvsp: ENST00000393028.1:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.624C>T
  hgvsp: ENST00000591349.1:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.915C>T
  hgvsp: ENST00000586027.1:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1332C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.300C>T
  hgvsp: ENST00000589631.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.624C>T
  hgvsp: ENST00000393029.3:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.915C>T
  hgvsp: ENST00000345425.2:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*254C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp305Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

19-14589322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589322
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589322
    reference: chr 19
allele count: 3
allele frequency: 2.559508574353724e-5
allele num: 117210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.617C>T
  hgvsp: ENSP00000376748.1:p.Ala206Val
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1325C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.617C>T
  hgvsp: ENSP00000467077.1:p.Ala206Val
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*247C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.293C>T
  hgvsp: ENSP00000466312.1:p.Ala98Val
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.908C>T
  hgvsp: ENSP00000376753.3:p.Ala303Val
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.617C>T
  hgvsp: ENSP00000376749.3:p.Ala206Val
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.908C>T
  hgvsp: ENSP00000466747.1:p.Ala303Val
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.908C>T
  hgvsp: ENSP00000340698.1:p.Ala303Val
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala303Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/19-14589323-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589323
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589323
    reference: chr 19
allele count: 1
allele frequency: 8.521081154776918e-6
allele num: 117356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1324G>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.616G>T
  hgvsp: ENSP00000376748.1:p.Ala206Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.616G>T
  hgvsp: ENSP00000467077.1:p.Ala206Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.907G>T
  hgvsp: ENSP00000466747.1:p.Ala303Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.907G>T
  hgvsp: ENSP00000376753.3:p.Ala303Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.616G>T
  hgvsp: ENSP00000376749.3:p.Ala206Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.907G>T
  hgvsp: ENSP00000340698.1:p.Ala303Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.292G>T
  hgvsp: ENSP00000466312.1:p.Ala98Ser
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*246G>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13623
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2695
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala303Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-14589326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589326
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589326
    reference: chr 19
allele count: 4
allele frequency: 3.396450709009085e-5
allele num: 117770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.904G>A
  hgvsp: ENSP00000466747.1:p.Glu302Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1321G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.613G>A
  hgvsp: ENSP00000467077.1:p.Glu205Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.904G>A
  hgvsp: ENSP00000340698.1:p.Glu302Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.613G>A
  hgvsp: ENSP00000376749.3:p.Glu205Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.289G>A
  hgvsp: ENSP00000466312.1:p.Glu97Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*243G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.613G>A
  hgvsp: ENSP00000376748.1:p.Glu205Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.904G>A
  hgvsp: ENSP00000376753.3:p.Glu302Lys
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu302Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

19-14589327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589327
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589327
    reference: chr 19
allele count: 7
allele frequency: 5.925875759781928e-5
allele num: 118126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.612C>T
  hgvsp: ENST00000393029.3:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.903C>T
  hgvsp: ENST00000586027.1:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.903C>T
  hgvsp: ENST00000393033.4:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.612C>T
  hgvsp: ENST00000591349.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1320C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.288C>T
  hgvsp: ENST00000589631.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.903C>T
  hgvsp: ENST00000345425.2:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.612C>T
  hgvsp: ENST00000393028.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*242C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala301Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

19-14589339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589339
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589339
    reference: chr 19
allele count: 1
allele frequency: 8.364001338240215e-6
allele num: 119560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.891G>A
  hgvsp: ENST00000586027.1:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.891G>A
  hgvsp: ENST00000393033.4:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.600G>A
  hgvsp: ENST00000393029.3:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*230G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1308G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.276G>A
  hgvsp: ENST00000589631.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.600G>A
  hgvsp: ENST00000591349.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.891G>A
  hgvsp: ENST00000345425.2:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.600G>A
  hgvsp: ENST00000393028.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro297Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

19-14589340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589340
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589340
    reference: chr 19
allele count: 2
allele frequency: 1.671402306535183e-5
allele num: 119660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.890C>T
  hgvsp: ENSP00000340698.1:p.Pro297Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.890C>T
  hgvsp: ENSP00000376753.3:p.Pro297Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.599C>T
  hgvsp: ENSP00000467077.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.275C>T
  hgvsp: ENSP00000466312.1:p.Pro92Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1307C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.890C>T
  hgvsp: ENSP00000466747.1:p.Pro297Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.599C>T
  hgvsp: ENSP00000376748.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*229C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.599C>T
  hgvsp: ENSP00000376749.3:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7780
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro297Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-14589342-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589342
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589342
    reference: chr 19
allele count: 1
allele frequency: 8.340422692622062e-6
allele num: 119898
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.888C>T
  hgvsp: ENST00000345425.2:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.597C>T
  hgvsp: ENST00000393029.3:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.888C>T
  hgvsp: ENST00000586027.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1305C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.888C>T
  hgvsp: ENST00000393033.4:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.597C>T
  hgvsp: ENST00000393028.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.597C>T
  hgvsp: ENST00000591349.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*227C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.273C>T
  hgvsp: ENST00000589631.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn296Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

19-14589342-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589342
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589342
    reference: chr 19
allele count: 80
allele frequency: 6.672338154097649e-4
allele num: 119898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*227C>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.597C>G
  hgvsp: ENSP00000376748.1:p.Asn199Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1305C>G
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.597C>G
  hgvsp: ENSP00000467077.1:p.Asn199Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.888C>G
  hgvsp: ENSP00000466747.1:p.Asn296Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.888C>G
  hgvsp: ENSP00000376753.3:p.Asn296Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.597C>G
  hgvsp: ENSP00000376749.3:p.Asn199Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.888C>G
  hgvsp: ENSP00000340698.1:p.Asn296Lys
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.273C>G
  hgvsp: ENSP00000466312.1:p.Asn91Lys
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14405
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36898
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn296Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

19-14589375-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589375
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589375
    reference: chr 19
allele count: 3
allele frequency: 2.48032277267015e-5
allele num: 120952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.564C>T
  hgvsp: ENST00000591349.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1272C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.240C>T
  hgvsp: ENST00000589631.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.855C>T
  hgvsp: ENST00000586027.1:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*194C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.855C>T
  hgvsp: ENST00000393033.4:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.564C>T
  hgvsp: ENST00000393028.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.564C>T
  hgvsp: ENST00000393029.3:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.855C>T
  hgvsp: ENST00000345425.2:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36772
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Ala285Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

19-14589378-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589378
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589378
    reference: chr 19
allele count: 25883
allele frequency: 2.138101374570447e-1
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.561G>A
  hgvsp: ENST00000393029.3:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1269G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.237G>A
  hgvsp: ENST00000589631.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.852G>A
  hgvsp: ENST00000586027.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.561G>A
  hgvsp: ENST00000591349.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.852G>A
  hgvsp: ENST00000393033.4:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*191G>A
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.852G>A
  hgvsp: ENST00000345425.2:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.561G>A
  hgvsp: ENST00000393028.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23314
  bin: 2.25e1
  variant carriers: 293
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 5.25e1
  variant carriers: 1232
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 7.75e1
  variant carriers: 1685
genotype depth: GenotypeDepth
  all individuals: 4903
  bin: 9.75e1
  variant carriers: 4879
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 2.75e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.75e1
  variant carriers: 1505
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 8.25e1
  variant carriers: 1515
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 7.25e1
  variant carriers: 1654
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.75e1
  variant carriers: 715
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.25e1
  variant carriers: 904
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 8.75e1
  variant carriers: 1359
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.75e1
  variant carriers: 1814
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 3.25e1
  variant carriers: 589
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 1700
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 9.25e1
  variant carriers: 1237
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.75e1
  variant carriers: 1108
genotype quality: GenotypeQuality
  all individuals: 24516
  bin: 6.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 4925
  bin: 6.75e1
  variant carriers: 21
hgvs: c.852G>A
num of homozygotes: 2933
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

19-14589382-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589382
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589382
    reference: chr 19
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.560-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.560-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*190-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1268-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.851-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.236-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.851-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.851-3T>C
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.560-3T>C
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: c.851-3T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP

19-14589386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14589386
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14589386
    reference: chr 19
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466747
  ensembl transcript: ENST00000586027
  gene symbol: GIPC1
  hgvsc: ENST00000586027.1:c.851-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376749
  ensembl transcript: ENST00000393029
  gene symbol: GIPC1
  hgvsc: ENST00000393029.3:c.560-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000466312
  ensembl transcript: ENST00000589631
  gene symbol: GIPC1
  hgvsc: ENST00000589631.1:c.236-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000340698
  ensembl transcript: ENST00000345425
  gene symbol: GIPC1
  hgvsc: ENST00000345425.2:c.851-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl transcript: ENST00000585606
  gene symbol: GIPC1
  hgvsc: ENST00000585606.1:n.1268-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376753
  ensembl transcript: ENST00000393033
  gene symbol: GIPC1
  hgvsc: ENST00000393033.4:c.851-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000467077
  ensembl transcript: ENST00000591349
  gene symbol: GIPC1
  hgvsc: ENST00000591349.1:c.560-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000376748
  ensembl transcript: ENST00000393028
  gene symbol: GIPC1
  hgvsc: ENST00000393028.1:c.560-7C>T
  variant of: http://identifiers.org/hgnc/1226
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123159
  ensembl protein: ENSP00000465003
  ensembl transcript: ENST00000589497
  gene symbol: GIPC1
  hgvsc: ENST00000589497.1:c.*190-7C>T
  variant of: http://identifiers.org/hgnc/1226
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 23516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: c.851-7C>T
num of homozygotes: 0
reference allele: G

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1452
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.991e0

DP
type: SiteQuality
SIO_000300: 1.09273e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.64e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 9.33e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.846381093057607e-4
allele num: 5416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.116e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.389e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

FS
type: SiteQuality
SIO_000300: 6.644e0

QD
type: SiteQuality
SIO_000300: 9.75e0

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.64e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.14833e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.77683013503909e-4
allele num: 5628
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -2.054e0

FS
type: SiteQuality
SIO_000300: 2.366e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.72e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.113e0

MQ
type: SiteQuality
SIO_000300: 4.872e1

DP
type: SiteQuality
SIO_000300: 1.31564e5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.477541371158392e-4
allele num: 6768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.586e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.81e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.75389e5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.729e0

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

QD
type: SiteQuality
SIO_000300: 7.01e0

DP
type: SiteQuality
SIO_000300: 1.8404e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.989999999999999e-2

FS
type: SiteQuality
SIO_000300: 6.06e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.406469760900141e-4
allele num: 7110
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.99e-1

DP
type: SiteQuality
SIO_000300: 1.82908e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.05e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.888e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2484
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.187e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.24e-2

DP
type: SiteQuality
SIO_000300: 1.80591e5

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 7.963e0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -6.921e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

DP
type: SiteQuality
SIO_000300: 1.8013e5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.378929950358522e-4
allele num: 7252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.365e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.92e-1

FS
type: SiteQuality
SIO_000300: 2.694e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.15e-2

DP
type: SiteQuality
SIO_000300: 1.87642e5

QD
type: SiteQuality
SIO_000300: 1.221e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e0

South Asian
type: Population
allele count: 1
allele frequency: 1.378169790518192e-4
allele num: 7256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.75e-2

QD
type: SiteQuality
SIO_000300: 1.316e1

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.87984e5

FS
type: SiteQuality
SIO_000300: 3.464e0

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.75e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-3

DP
type: SiteQuality
SIO_000300: 1.87984e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.464e0

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.316e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.37854976564654e-4
allele num: 7254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2586
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 1.88281e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.06e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

FS
type: SiteQuality
SIO_000300: 3.4e0

QD
type: SiteQuality
SIO_000300: 1.303e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.19e-2

QD
type: SiteQuality
SIO_000300: 3.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.368e0

DP
type: SiteQuality
SIO_000300: 1.87061e5

VQSLOD
type: SiteQuality
SIO_000300: -3.263e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.716981132075472e-3
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

DP
type: SiteQuality
SIO_000300: 1.8795e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.897e0

MQRankSum
type: SiteQuality
SIO_000300: -1.663e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.372e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.17e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.432e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.182033096926714e-3
allele num: 2538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.119e0

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.19e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.028e0

DP
type: SiteQuality
SIO_000300: 1.7672e5

FS
type: SiteQuality
SIO_000300: 1.305e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.16e-2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2544
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.76899e5

FS
type: SiteQuality
SIO_000300: 3.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.19e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.236e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2544
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.836074872376631e-4
allele num: 7052
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.359e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.17e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

DP
type: SiteQuality
SIO_000300: 1.77349e5

QD
type: SiteQuality
SIO_000300: 1.123e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.033e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6868
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2440
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.33e0

ReadPosRankSum
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SIO_000300: -2.39e0

MQ
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InbreedingCoeff
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FS
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.85e0

DP
type: SiteQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 8.56898029134533e-4
allele num: 2334
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
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QD
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SIO_000300: 1.1e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.660000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

DP
type: SiteQuality
SIO_000300: 1.55832e5

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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SIO_000300: 1.059e0

QD
type: SiteQuality
SIO_000300: 1.1e1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.660000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.55832e5

VQSLOD
type: SiteQuality
SIO_000300: -1.657e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 7138
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2852
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.692632566870014e-5
allele num: 21310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.58941e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

QD
type: SiteQuality
SIO_000300: 4.23e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.701242571582928e-4
allele num: 3702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.95e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.64e-1

DP
type: SiteQuality
SIO_000300: 5.74854e5

VQSLOD
type: SiteQuality
SIO_000300: -2.482e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

QD
type: SiteQuality
SIO_000300: 2.609e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.534736078360239e-5
allele num: 22052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3768
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.405e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

QD
type: SiteQuality
SIO_000300: 8.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.636e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -6.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.85096e5

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Other
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allele frequency: 6.802721088435374e-3
allele num: 294
num of homozygotes: 0

South Asian
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allele count: 68
allele frequency: 9.042553191489361e-3
allele num: 7520
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 37
allele frequency: 1.208360548661006e-2
allele num: 3062
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 8.896005693443644e-5
allele num: 22482
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3872
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
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QD
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 1.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 3108
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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Latino
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allele frequency: 6.626905235255136e-4
allele num: 3018
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European (Non-Finnish)
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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Latino
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Other
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DP
type: SiteQuality
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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Other
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South Asian
type: Population
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23540
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 6.37e0

VQSLOD
type: SiteQuality
SIO_000300: -8.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 6.23633e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.259376412110258e-4
allele num: 4426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1280
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

DP
type: SiteQuality
SIO_000300: 6.80074e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.143e0

QD
type: SiteQuality
SIO_000300: 3.62e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.274261603375527e-4
allele num: 3792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9154
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 3.75e0

DP
type: SiteQuality
SIO_000300: 7.1096e5

MQ
type: SiteQuality
SIO_000300: 5.829e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.297e0

FS
type: SiteQuality
SIO_000300: 3.98e0

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.503006012024048e-3
allele num: 3992
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 6.66e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.39276e5

VQSLOD
type: SiteQuality
SIO_000300: -2.777e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 1.8649e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.416000546560088e-5
allele num: 29274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

QD
type: SiteQuality
SIO_000300: 5.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.185999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 7.54957e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.490134994807892e-5
allele num: 30816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.70839e5

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.348400203148806e-5
allele num: 31504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1720
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

DP
type: SiteQuality
SIO_000300: 7.80486e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.81e-1

FS
type: SiteQuality
SIO_000300: 3.817e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.881512217611803e-5
allele num: 34704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4852
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

DP
type: SiteQuality
SIO_000300: 8.34829e5

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.159e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.264e0

QD
type: SiteQuality
SIO_000300: 6.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 8.41919e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 234
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GenotypeQuality
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GenotypeQuality
all individuals: 914
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GenotypeQuality
all individuals: 25387
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.751183008693738e-5
allele num: 36348
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.713502398903359e-4
allele num: 5836
num of homozygotes: 0

South Asian
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allele frequency: 8.762705923589205e-5
allele num: 11412
num of homozygotes: 0

QD
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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SIO_000300: -9.95e-1

ReadPosRankSum
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SIO_000300: 1.84e-1

MQ
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SIO_000300: 5.863e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.66848e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 5024
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.701972439881113e-5
allele num: 37010
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 472
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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MQ
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2308
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 5.186721991701245e-5
allele num: 38560
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 5538
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 482
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
allele num: 6090
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DP
type: SiteQuality
SIO_000300: 9.01511e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5376
num of homozygotes: 0

African
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allele count: 15
allele frequency: 2.4216984178237e-3
allele num: 6194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2418
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.758705592683785e-4
allele num: 5686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.115903852486006e-4
allele num: 12148
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 4.602e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.19226e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.429071123202487e-5
allele num: 41168
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12428
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5554
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

VQSLOD
type: SiteQuality
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MQRankSum
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SIO_000300: -5.5e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.4412e5

BaseQRankSum
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SIO_000300: -1.495e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 7.830853563038371e-5
allele num: 12770
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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QD
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MQ
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FS
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 12892
num of homozygotes: 0

East Asian
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European (Finnish)
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.302555836979047e-5
allele num: 43430
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Other
type: Population
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Latino
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African
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allele frequency: 9.030704394942806e-4
allele num: 6644
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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VQSLOD
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DP
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ClippingRankSum
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FS
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MQ
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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European (Non-Finnish)
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East Asian
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allele num: 6200
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Latino
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South Asian
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Other
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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QD
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.34437254155564e-5
allele num: 47286
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.40607424071991e-4
allele num: 7112
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.049887e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 5.564e0

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
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SIO_000300: 1.301e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: -1.097e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 1
allele frequency: 1.572821642025794e-4
allele num: 6358
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13770
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7194
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3466
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.092663123090445e-5
allele num: 47786
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.405678942929435e-4
allele num: 7114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
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DP
type: SiteQuality
SIO_000300: 1.061228e6

VQSLOD
type: SiteQuality
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MQRankSum
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MQ
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BaseQRankSum
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SIO_000300: -1.303e0

ReadPosRankSum
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SIO_000300: 1.85e-1

QD
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SIO_000300: 1.029e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

FS
type: SiteQuality
SIO_000300: 1.382e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.971686580701132e-5
allele num: 50718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3880
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.304461257500652e-4
allele num: 7666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.971686580701132e-5
allele num: 50718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14198
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.114777e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.403e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.871467604895759e-5
allele num: 53434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4272
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South Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.166936e6

FS
type: SiteQuality
SIO_000300: 7.267e0

QD
type: SiteQuality
SIO_000300: 8.92e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8390
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European (Non-Finnish)
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allele frequency: 3.712228079293192e-5
allele num: 53876
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
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DP
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
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FS
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 6.075334143377885e-4
allele num: 8230
num of homozygotes: 0

East Asian
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Other
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 5.517748758506529e-5
allele num: 54370
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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European (Non-Finnish)
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South Asian
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Other
type: Population
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African
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ClippingRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56334
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.606765327695561e-5
allele num: 15136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.230046e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

FS
type: SiteQuality
SIO_000300: 1.586e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
all individuals: 1248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.431695394906098e-5
allele num: 15548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5188
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

FS
type: SiteQuality
SIO_000300: 5.257e0

VQSLOD
type: SiteQuality
SIO_000300: -2.68e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

DP
type: SiteQuality
SIO_000300: 1.282484e6

GenotypeQuality
all individuals: 885
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5772
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.670062460336017e-5
allele num: 59878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15722
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 9.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: -1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.055e0

VQSLOD
type: SiteQuality
SIO_000300: -2.584e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 1.310805e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

GenotypeQuality
all individuals: 1084
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 835
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.328562393902073e-5
allele num: 60086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.364e0

DP
type: SiteQuality
SIO_000300: 1.315574e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 7.937e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.469e1

GenotypeQuality
all individuals: 33757
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1220
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variant carriers: 1

GenotypeQuality
all individuals: 1288
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 658
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1275
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2100
bin: 7.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.671146759158899e-4
allele num: 9226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.989785766399151e-4
allele num: 60308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

FS
type: SiteQuality
SIO_000300: 2.40494e2

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.651e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.209e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.49e-1

QD
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 1.344609e6

GenotypeQuality
all individuals: 669
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 808
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 35827
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.725923369002416e-4
allele num: 5794
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.415e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.471e0

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.86e-1

DP
type: SiteQuality
SIO_000300: 1.379213e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.201536737634064e-5
allele num: 62470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -3.894e0

FS
type: SiteQuality
SIO_000300: 2.3633e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.39116e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

QD
type: SiteQuality
SIO_000300: 3.72e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590836780146357e-5
allele num: 62860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5902
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.977600796416127e-4
allele num: 16072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.219809709685289e-4
allele num: 8198
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.175e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

DP
type: SiteQuality
SIO_000300: 1.402254e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 364
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10894
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.235635734585444e-4
allele num: 16186
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

DP
type: SiteQuality
SIO_000300: 1.423678e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.086e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.922e0

MQ
type: SiteQuality
SIO_000300: 5.912e1

FS
type: SiteQuality
SIO_000300: 1.4011e1

GenotypeQuality
all individuals: 1153
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.660411358975952e-5
allele num: 64372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

QD
type: SiteQuality
SIO_000300: 1.066e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.342e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.444873e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 625
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variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551349674216568e-5
allele num: 64460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.448068e6

MQRankSum
type: SiteQuality
SIO_000300: -1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.484e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-3

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38594
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.639366571817395e-5
allele num: 64664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183712121212121e-4
allele num: 8448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.456717e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 4.094e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.085e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
all individuals: 1848
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
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GenotypeQuality
all individuals: 1219
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.253261774775608e-5
allele num: 64842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.179523472517103e-4
allele num: 8478
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.716e1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

FS
type: SiteQuality
SIO_000300: 1.459e0

DP
type: SiteQuality
SIO_000300: 1.462298e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 149
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 755
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GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.767532721234616e-5
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.5e1

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

VQSLOD
type: SiteQuality
SIO_000300: -1.082e0

DP
type: SiteQuality
SIO_000300: 1.486697e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523043650431021e-5
allele num: 65658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: -2.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

FS
type: SiteQuality
SIO_000300: 1.9771e1

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 1.489583e6

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 810
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519849230956289e-5
allele num: 65796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
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VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

FS
type: SiteQuality
SIO_000300: 6.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.493674e6

QD
type: SiteQuality
SIO_000300: 1.29e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 80

GenotypeQuality
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GenotypeQuality
all individuals: 810
bin: 8.75e1
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GenotypeQuality
all individuals: 2244
bin: 8.25e1
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GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 80
allele frequency: 6.984459577440196e-3
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

DP
type: SiteQuality
SIO_000300: 1.493674e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 6.55e-1

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38834
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.899671370578001e-4
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.4623e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.869e0

DP
type: SiteQuality
SIO_000300: 1.510149e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

QD
type: SiteQuality
SIO_000300: 1.206e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1950
bin: 7.25e1
variant carriers: 21

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 13

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 26

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 223
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1457
bin: 8.25e1
variant carriers: 32

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2282
bin: 7.75e1
variant carriers: 36

GenotypeQuality
all individuals: 23486
bin: 9.75e1
variant carriers: 22676

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 546
bin: 9.25e1
variant carriers: 37

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 8

Other
type: Population
allele count: 202
allele frequency: 2.229580573951435e-1
allele num: 906
num of homozygotes: 24

South Asian
type: Population
allele count: 2593
allele frequency: 1.571134270479884e-1
allele num: 16504
num of homozygotes: 238

East Asian
type: Population
allele count: 2821
allele frequency: 3.267315265230484e-1
allele num: 8634
num of homozygotes: 455

African
type: Population
allele count: 2705
allele frequency: 2.607983031237948e-1
allele num: 10372
num of homozygotes: 360

Latino
type: Population
allele count: 2437
allele frequency: 2.109226241994115e-1
allele num: 11554
num of homozygotes: 274

European (Finnish)
type: Population
allele count: 1403
allele frequency: 2.13027634375949e-1
allele num: 6586
num of homozygotes: 136

European (Non-Finnish)
type: Population
allele count: 13722
allele frequency: 2.063458646616541e-1
allele num: 66500
num of homozygotes: 1446

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.64e1

DP
type: SiteQuality
SIO_000300: 2.639337e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.97e0

GenotypeQuality
all individuals: 2638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

QD
type: SiteQuality
SIO_000300: 1.536e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.83e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

DP
type: SiteQuality
SIO_000300: 2.648077e6

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25494
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20517
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5433
bin: 6.75e1
variant carriers: 0